mRNA_C-tenellus_contig11624.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11624.1.1 vs. uniprot
Match: D7G2T5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T5_ECTSI) HSP 1 Score: 110 bits (274), Expect = 4.190e-27 Identity = 56/111 (50.45%), Postives = 77/111 (69.37%), Query Frame = 1 Query: 19 MEVWNFERLASTPMLACAFEEFARRALCHESVQFLVDVFRYQEGNFS-SVRYEMDRAAD-QYEGFTFIVTKYIVSGAPEEVNISSRDKKAIMDIFRAGLLFFSYMTDEERR 345 MEVWNFERLA TP+LA AFE++++RALCHESV FL +V RYQ +++ S R + + Q+ F +I +I G+PEEVNIS DKKAI+D++ G F + +E+RR Sbjct: 117 MEVWNFERLARTPLLAAAFEDYSKRALCHESVLFLSEVSRYQSDDYATSARPSSESSCPTQFGTFCYITDTFIKGGSPEEVNISDADKKAILDVYHKGEESFGGVNEEDRR 227
BLAST of mRNA_C-tenellus_contig11624.1.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI) HSP 1 Score: 113 bits (283), Expect = 4.330e-27 Identity = 55/116 (47.41%), Postives = 82/116 (70.69%), Query Frame = 1 Query: 1 RVSGQDMEVWNFERLASTPMLACAFEEFARRALCHESVQFLVDVFRYQEGNFSSVRYEMDRAA-DQYEGFTFIVTKYIVSGAPEEVNISSRDKKAIMDIFRAGLLFFSYMTDEERR 345 R ++MEVWNFERLA TP+LA AFE++++RALCHESV FL +V RYQ ++++ + R++ Q+ F +I +I +G+PEEVNIS DKK I+++++ G F + +EERR Sbjct: 360 RPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERR 475
BLAST of mRNA_C-tenellus_contig11624.1.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 110 bits (276), Expect = 5.420e-26 Identity = 51/111 (45.95%), Postives = 77/111 (69.37%), Query Frame = 1 Query: 13 QDMEVWNFERLASTPMLACAFEEFARRALCHESVQFLVDVFRYQEGNFSSVRYEMDRAADQYEGFTFIVTKYIVSGAPEEVNISSRDKKAIMDIFRAGLLFFSYMTDEERR 345 ++MEVW+FERL TP+LA AFE++++RALCHESV FL +V RYQ ++++ Q+ F +I +I +GAPEEVNIS +D+K I+++++ G F + +EERR Sbjct: 456 EEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAGTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERR 566
BLAST of mRNA_C-tenellus_contig11624.1.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE) HSP 1 Score: 100 bits (250), Expect = 1.840e-22 Identity = 46/113 (40.71%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 13 QDMEVWNFERLASTPMLACAFEEFARRALCHESVQFLVDVFRYQEGNFSSVRYEMDRAA--DQYEGFTFIVTKYIVSGAPEEVNISSRDKKAIMDIFRAGLLFFSYMTDEERR 345 QD+++W+FER+ TP+LA AFE+++++ALCHES FL +V RYQ G+++ ++ Q+ F +I +I +G+PEEVNIS +++K I+ ++ G F + +EERR Sbjct: 446 QDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMATRASSGSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNEEERR 558
BLAST of mRNA_C-tenellus_contig11624.1.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI) HSP 1 Score: 100 bits (249), Expect = 2.040e-22 Identity = 47/113 (41.59%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 13 QDMEVWNFERLASTPMLACAFEEFARRALCHESVQFLVDVFRYQEGNFSSVRYEMDRAA--DQYEGFTFIVTKYIVSGAPEEVNISSRDKKAIMDIFRAGLLFFSYMTDEERR 345 QD+++W+FER+ TP+LA AFE++++RALCHES FL +V RYQ G++++ ++ Q+ F +I +I +G+PEEVNIS +++K I+ ++ G F + D ERR Sbjct: 343 QDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERR 455
BLAST of mRNA_C-tenellus_contig11624.1.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 7.510e-22 Identity = 46/113 (40.71%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 13 QDMEVWNFERLASTPMLACAFEEFARRALCHESVQFLVDVFRYQEGNFSSVRYEMDRAA--DQYEGFTFIVTKYIVSGAPEEVNISSRDKKAIMDIFRAGLLFFSYMTDEERR 345 QD+++W+FER+ TP+LA AFE++++RALCHES FL +V RYQ G++++ + ++ Q+ F +I +I +G+ EEVNIS +++K I+ ++ G F + EERR Sbjct: 204 QDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASSGSSFPTQFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNVEERR 316
BLAST of mRNA_C-tenellus_contig11624.1.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.510e-21 Identity = 50/112 (44.64%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 13 QDMEVWNFERLASTPMLACAFEEFARRALCHESVQFLVDVFRYQEGNFSS-VRYEMDRAADQYEGFTFIVTKYIVSGAPEEVNISSRDKKAIMDIFRAGLLFFSYMTDEERR 345 ++MEVW+FERL TP+LA AFE++++RALCHESV FL +V RYQ ++++ Q+ F FI +I +GAPEEVNI +K I+++++ G F + +EERR Sbjct: 385 EEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERR 492
BLAST of mRNA_C-tenellus_contig11624.1.1 vs. uniprot
Match: D7FTV9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV9_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 8.320e-21 Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 19 MEVWNFERLASTPMLACAFEEFARRALCHESVQFLVDVFRYQEGNFSSVRYEMDRAAD--QYEGFTFIVTKYIVSGAPEEVNIS---SRDKKAIMDIFRAGLLFFSYMTD 333 MEVW+FER+ASTP+LA AFE++++RALCHESV FL +V RYQ N+ ++ Q+ F +I +I +G+PEEVNI SR + + ++ A L+ TD Sbjct: 1 MEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSPEEVNIRMIFSRAHRDVKNMLEANLVLRFLNTD 110
BLAST of mRNA_C-tenellus_contig11624.1.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 3.350e-18 Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 1 RVSGQDMEVWNFERLASTPMLACAFEEFARRALCHESVQFLVDVFRYQEGNFSSVRYEMDRAAD--QYEGFTFIVTKYIVSGAPEEVNIS---SRDKKAIMDIFRAGLLFFSYMTD 333 R ++MEVW+FER+ASTP+LA AFE++++RALCHESV FL +V RYQ N+ ++ Q+ F +I +I +G+ EEVNI SR + + ++ A L+ TD Sbjct: 331 RSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNIRMIFSRAYRDVKNMLEANLVLRFLNTD 446
BLAST of mRNA_C-tenellus_contig11624.1.1 vs. uniprot
Match: A0A6H5LA03_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA03_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 6.470e-17 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 19 MEVWNFERLASTPMLACAFEEFARRALCHESVQFLVDVFRYQEGNFSSVRYEMDRAA--DQYEGFTFIVTKYIVSGAPEEVNISSRDKKAIMD 291 MEVW+FERLA TP+LA AFE++++RALCHESV FL +V YQ ++++ ++ Q+ +I + +G+PEEVN S DKKAI + Sbjct: 482 MEVWSFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSWYQNDDYATQTRASSGSSCPTQFGTLCYITDTFTKAGSPEEVNTSDADKKAIFE 574 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11624.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11624.1.1 >prot_C-tenellus_contig11624.1.1 ID=prot_C-tenellus_contig11624.1.1|Name=mRNA_C-tenellus_contig11624.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=110bp MEVWNFERLASTPMLACAFEEFARRALCHESVQFLVDVFRYQEGNFSSVRback to top mRNA from alignment at C-tenellus_contig11624:181..1404- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11624.1.1 ID=mRNA_C-tenellus_contig11624.1.1|Name=mRNA_C-tenellus_contig11624.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1224bp|location=Sequence derived from alignment at C-tenellus_contig11624:181..1404- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11624:181..1404- >mRNA_C-tenellus_contig11624.1.1 ID=mRNA_C-tenellus_contig11624.1.1|Name=mRNA_C-tenellus_contig11624.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=330bp|location=Sequence derived from alignment at C-tenellus_contig11624:181..1404- (Choristocarpus tenellus KU2346)back to top |