mRNA_C-tenellus_contig11445.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11445.1.1 vs. uniprot
Match: D8LR38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR38_ECTSI) HSP 1 Score: 214 bits (545), Expect = 1.220e-61 Identity = 102/145 (70.34%), Postives = 120/145 (82.76%), Query Frame = 1 Query: 1 RCQICSVETTQTDKDPRQAKGIGFGEDPALVEAVERHRKNENGYHFESTEQLRRVEEERIRLEKERRVLFVDYDKQFYDLDDPENMFQFDRRHRHWLKKHGVIRQGVLWRKEELVRWFEGREAEGDPEAAEMKGRMMSWHASATR 435 RC+ C +E T+ KD RQAKGIGFGEDPALVEAVERHR NE G+ FE++ QL+ VE+ERIRLEKERRV F +YD FYDLDDPE M++ DRRHRHWLK+ GVIRQGVLWRKEEL+ WF+ R AEGD EA EMKG M++W+ +ATR Sbjct: 1532 RCRDCGMEATRMHKDVRQAKGIGFGEDPALVEAVERHRANEGGFRFETSAQLKAVEDERIRLEKERRVCFAEYDHMFYDLDDPEMMYELDRRHRHWLKEKGVIRQGVLWRKEELLEWFDNRVAEGDTEATEMKGVMIAWYDNATR 1676
BLAST of mRNA_C-tenellus_contig11445.1.1 vs. uniprot
Match: A0A7S3HJF4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJF4_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.550e-24 Identity = 62/137 (45.26%), Postives = 84/137 (61.31%), Query Frame = 1 Query: 1 RCQICSVETTQTDKDPRQAKGIGFGEDPALVEAVERHRKNENGYHFESTEQLRRVEEERIRLEKERRVLFVDYDKQFYDLDDPENMFQFDRRHRHWLKKHGVIRQGVLWRKEEL--------VRWFEGREAEGDPEA 387 +C +C E ++ K+ Q G G G DPAL EAV+RHR+NE + F+S+++L VE+ERIRLEKERR + + FYD D ++ FDRRH +KK G+ RQG+ W++EEL R E E EG PEA Sbjct: 493 KCTVCGKELSELHKEESQVLGYGSGADPALFEAVKRHRENEMTFRFKSSQELENVEQERIRLEKERREMETS-EAYFYDFQDLPVIYDFDRRHAVSIKKAGIFRQGLQWKEEELEFFELSKVTREKERLEKEGLPEA 628
BLAST of mRNA_C-tenellus_contig11445.1.1 vs. uniprot
Match: A0A835YM62_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM62_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.690e-10 Identity = 38/66 (57.58%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 154 LRRVEEERIRLEKERRVLF--VDYDKQFYDLDDPENMFQFDRRHRHWLKKHGVIRQGVLWRKEELV 345 L VE ER+RLEKER + D D FYDLDD ++QFD RHR LK+ GV+RQGVLW K+EL+ Sbjct: 2034 LAAVEAERLRLEKERFAMARGADADALFYDLDDASMVYQFDLRHRVNLKEAGVVRQGVLWEKDELL 2099
BLAST of mRNA_C-tenellus_contig11445.1.1 vs. uniprot
Match: A0A6G0WGR8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGR8_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.480e-7 Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 1 RCQICSVETTQTDKDPRQAKGIGFGEDPALVEAVERHRKNENGYHFESTEQLRRVEEERIRLEKERRVLFVDYDKQFYD 237 RC+ C E ++T ++ A+G DP L VE+HR NE+ +HFE+ L+RVE+ERIRLEKE R + ++ + Q YD Sbjct: 1186 RCKQCGKEMSRTFEETDVARGA----DPQLDRDVEKHRLNESSFHFENAAHLKRVEDERIRLEKEAREIQLN-EVQSYD 1259
BLAST of mRNA_C-tenellus_contig11445.1.1 vs. uniprot
Match: A0A1V9Y827_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y827_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 2.370e-6 Identity = 33/93 (35.48%), Postives = 55/93 (59.14%), Query Frame = 1 Query: 1 RCQICSVETTQTDKDPRQAKGIGFGEDPALVEAVERHRKNENGYHFESTEQLRRVEEERIRLEKERRVLFVDYDKQFYDLDDPENMFQFDRRH 279 +C+ C E ++ ++K G DPAL + +E+HR+NE + F S L+ VE+ER+RLEKERR + + + + YD + + +F+ RH Sbjct: 1159 KCKSCGAEVSKL----YESKDAARGTDPALDKDIEKHRENEASFRFTSAAHLKAVEDERLRLEKERREIDLS-EIRMYDAVHSKAIAEFNFRH 1246
BLAST of mRNA_C-tenellus_contig11445.1.1 vs. uniprot
Match: A0A485LNB1_9STRA (Aste57867_23364 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNB1_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.500e-5 Identity = 35/93 (37.63%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 1 RCQICSVETTQTDKDPRQAKGIGFGEDPALVEAVERHRKNENGYHFESTEQLRRVEEERIRLEKERRVLFVDYDKQFYDLDDPENMFQFDRRH 279 RC++C E + + A+G DPAL VE+HR NE + F + L+RVE+ER+RLEKE R + + + Q YD + + F+ RH Sbjct: 995 RCKVCGKEVSHIFDEEDVARGA----DPALDRDVEKHRLNEVSFRFTNAAHLKRVEDERLRLEKEAREIQL-AEVQSYDSTHMKAIEAFNFRH 1082
BLAST of mRNA_C-tenellus_contig11445.1.1 vs. uniprot
Match: A0A3R8D9W3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R8D9W3_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 2.640e-5 Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 1 Query: 1 RCQICSVETTQTDKDPRQAKGIGFGEDPALVEAVERHRKNENGYHFESTEQLRRVEEERIRLEKERR 201 +C+ C E +++ D A+G DPAL VE HR E + FE+ E LRRVE+ER+RLEKE R Sbjct: 100 KCKQCGKEMSRSFDDVDAARGA----DPALDHDVEMHRLFEASFRFENAEHLRRVEDERVRLEKEAR 162
BLAST of mRNA_C-tenellus_contig11445.1.1 vs. uniprot
Match: A0A3L6VD64_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VD64_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 2.700e-5 Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 1 Query: 1 RCQICSVETTQTDKDPRQAKGIGFGEDPALVEAVERHRKNENGYHFESTEQLRRVEEERIRLEKERR 201 +C+ C E +++ D A+G DPAL VE HR E + FE+ E LRRVE+ER+RLEKE R Sbjct: 389 KCKQCGKEMSRSFDDVDAARGA----DPALDHDVEMHRLFEASFRFENAEHLRRVEDERVRLEKEAR 451
BLAST of mRNA_C-tenellus_contig11445.1.1 vs. uniprot
Match: W4GGS7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGS7_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 2.780e-5 Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 1 Query: 1 RCQICSVETTQTDKDPRQAKGIGFGEDPALVEAVERHRKNENGYHFESTEQLRRVEEERIRLEKERR 201 +C+ C E +++ D A+G DPAL VE HR E + FE+ E LRRVE+ER+RLEKE R Sbjct: 1191 KCKQCGKEMSRSFDDVDAARGA----DPALDHDVEMHRLFEASFRFENAEHLRRVEDERVRLEKEAR 1253
BLAST of mRNA_C-tenellus_contig11445.1.1 vs. uniprot
Match: A0A3R7BAK0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BAK0_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 6.470e-5 Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 1 Query: 1 RCQICSVETTQTDKDPRQAKGIGFGEDPALVEAVERHRKNENGYHFESTEQLRRVEEERIRLEKERR 201 +C+ C E +++ D A+G DPAL VE HR E + F++ E LRRVE+ER+RLEKE R Sbjct: 710 KCKQCGKEMSRSFDDVDAARGA----DPALDRDVEMHRLFEASFRFDNAEHLRRVEDERVRLEKEAR 772 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11445.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11445.1.1 >prot_C-tenellus_contig11445.1.1 ID=prot_C-tenellus_contig11445.1.1|Name=mRNA_C-tenellus_contig11445.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=146bp RCQICSVETTQTDKDPRQAKGIGFGEDPALVEAVERHRKNENGYHFESTEback to top mRNA from alignment at C-tenellus_contig11445:304..1714+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11445.1.1 ID=mRNA_C-tenellus_contig11445.1.1|Name=mRNA_C-tenellus_contig11445.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1411bp|location=Sequence derived from alignment at C-tenellus_contig11445:304..1714+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11445:304..1714+ >mRNA_C-tenellus_contig11445.1.1 ID=mRNA_C-tenellus_contig11445.1.1|Name=mRNA_C-tenellus_contig11445.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=438bp|location=Sequence derived from alignment at C-tenellus_contig11445:304..1714+ (Choristocarpus tenellus KU2346)back to top |