mRNA_C-tenellus_contig11372.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11372.2.1 vs. uniprot
Match: D7FZ57_ECTSI (Plastid-lipid associated protein PAP / fibrillin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ57_ECTSI) HSP 1 Score: 103 bits (258), Expect = 5.010e-25 Identity = 55/106 (51.89%), Postives = 72/106 (67.92%), Query Frame = 1 Query: 1 KTQLLEAVQCTGRGVSTSTEQREEIDRLITALEAVNPTPNSGSSSLLSARWDLRWTSEREVLFLIEKGFFGLDTGVVFQAIDVEQGTLENTLLFEGGSFFSVGSSI 318 K +LL+ V+ T RG+STS EQR++ID LI A+E NP S +S LSARW L WT+ERE++FL+E+G G +G V Q IDV+ TL N ++F S F V SSI Sbjct: 99 KQRLLDTVRDTKRGISTSEEQRKDIDELIAAIEPFNPNAKSVTSESLSARWILEWTTEREIIFLMERGLPGKPSGPVEQDIDVDARTLSNRMIFGDDSLFEVASSI 204
BLAST of mRNA_C-tenellus_contig11372.2.1 vs. uniprot
Match: A0A7S0M3X5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M3X5_9CRYP) HSP 1 Score: 88.6 bits (218), Expect = 5.090e-20 Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 64 REEIDRLITALEAVNPTPNSGSSSLLSARWDLRWTSEREVLFLIEKGFFGLDTGVVFQAIDVEQGTLENTLLFEGGSFFSVGSS 315 ++ + LI AL NPTP++ SS L++ RW++RWT+E+E+LFL+EKGFFG V+Q ID GTL N L+FE S+ V S+ Sbjct: 57 KQRFEELIEALVDQNPTPDAASSPLMTGRWEMRWTTEKEILFLVEKGFFGQKCLSVYQDIDSAAGTLANALVFENDSYLKVQST 140
BLAST of mRNA_C-tenellus_contig11372.2.1 vs. uniprot
Match: A0A7S3XXJ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXJ7_HETAK) HSP 1 Score: 82.4 bits (202), Expect = 6.550e-17 Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 1 KTQLLEAVQCTGRGVSTSTEQREEIDRLITALEAVNPTPNSGSSSL---LSARWDLRWTSEREVLFLIEKGFFGLDTGVVFQAIDVEQGTLENTLLFEGGSFFSVGSS 315 K QLL+ V+ + RG+ T+ E +E I+ I LEA+NP + L+ RW L WT+E+EVLF+ EKGFFGL ++Q ID L+N + F S+FSV SS Sbjct: 80 KAQLLKVVEDSQRGLLTTPEDQELINDYIAKLEALNPAAKADPEEYRRTLNKRWRLTWTTEQEVLFIAEKGFFGLPVMDIYQDIDTVNNRLQNMIEFPQDSYFSVMSS 187
BLAST of mRNA_C-tenellus_contig11372.2.1 vs. uniprot
Match: A0A7S2I5Q3_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2I5Q3_9EUKA) HSP 1 Score: 70.9 bits (172), Expect = 4.260e-12 Identity = 45/109 (41.28%), Postives = 57/109 (52.29%), Query Frame = 1 Query: 1 KTQLLEAVQCTGRGVSTSTEQREEIDRLITALEAVNPTPNSGSSSLLSARWDLRWTSEREVLFLIEKGFFGL---DTGVVFQAIDVEQGT-LENTLLFEGGSFFSVGSS 315 K +LL + RG + + + AL +NPTPN SS LL W++ WT+E E+LFL EKGFFGL T D G L NT+ F+GG F VGSS Sbjct: 289 KKELLALCRGLERGARGDEADKARVAAAMEALATLNPTPNPASSLLLQGTWEVVWTTESELLFLTEKGFFGLPCLSTSQTIAPADTATGLELRNTVDFDGG-FLRVGSS 396
BLAST of mRNA_C-tenellus_contig11372.2.1 vs. uniprot
Match: A0A7S0JMC5_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JMC5_9EUKA) HSP 1 Score: 67.0 bits (162), Expect = 2.920e-11 Identity = 42/101 (41.58%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 40 GVSTSTEQREEIDRLITALEAVNPTPNSGSSSLLSARWDLRWTSEREVLFLIEKGFFGLDTGVVFQAI-------DVEQGTLE--NTLLFEGGSFFSVGSS 315 G ++ +EQR I I L AVNPTP+ +SSLL +W++ WT+E E+L L+ KG GL Q I D Q LE N + FEGGS +V S+ Sbjct: 59 GAASDSEQRAAIASQIDELAAVNPTPSPAASSLLRGKWEVVWTTESELLLLVNKGLPGLPGEGASQIIRFAEADDDASQRPLELLNCVQFEGGSALTVTST 159
BLAST of mRNA_C-tenellus_contig11372.2.1 vs. uniprot
Match: A0A7S0HLR2_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HLR2_9CRYP) HSP 1 Score: 67.0 bits (162), Expect = 7.850e-11 Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 34 GRGVST-STEQREEIDRLITALEAVNPTPNSGSSSLLSARWDLRWTSEREVLFLIEKGFFGLDTGVVFQAIDVEQGTLENTLLFEGGS-FFSVGSS 315 G+G+ T E+ + ++ LEA S + RW++ WT+E+E+LFL+EKG FGL V+Q I++E+G+L N + FE G VGSS Sbjct: 92 GKGLQTLPQEESARMKDIMDELEANFSVEKPAESPYMQGRWNMLWTTEKEILFLVEKGLFGLACTGVWQEINLEEGSLTNIIDFEEGKGMLKVGSS 187
BLAST of mRNA_C-tenellus_contig11372.2.1 vs. uniprot
Match: L1JCV5_GUITC (PAP_fibrillin domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JCV5_GUITC) HSP 1 Score: 62.8 bits (151), Expect = 9.160e-10 Identity = 33/98 (33.67%), Postives = 56/98 (57.14%), Query Frame = 1 Query: 1 KTQLLEAVQCTGRGVST-STEQREEIDRLITALEAVNPTPNSGSSSLLSARWDLRWTSEREVLFLIEKGFFGLDTGVVFQAIDVEQGTLENTLLFEGG 291 K +L Q +G+S +TE + + ++ LE+ S + RW++ WT+E+E+LFL+EKG FGL V+Q I++++ +L N + FE G Sbjct: 101 KAELRAICQRARKGLSELTTEDSQRMQEIMAKLESKFSIEKPAESLFMQGRWNMLWTTEKEILFLVEKGLFGLQCTGVWQDINLQEASLTNIIDFEMG 198
BLAST of mRNA_C-tenellus_contig11372.2.1 vs. uniprot
Match: A0A7S3XCP0_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XCP0_9CHLO) HSP 1 Score: 60.8 bits (146), Expect = 5.400e-9 Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 1 KTQLLEAVQCTGRGVSTSTEQREEIDRLITALEAVNPTPNSGSSSLLSARWDLRWTSEREVLFLIEKGFFGLDTGVVFQAIDVEQGTLENTLLFEGGSFFSVGSSI 318 K +LL +Q T RG+ +++EEI R L + + + +LSA+W L WT+E+E LF+ EK G +Q IDV++ TL+N + F F+V S I Sbjct: 52 KRELLRLIQGTKRGLVE--DRKEEIRRCAMELGDLASGSTNTAEEVLSAKWKLLWTTEKETLFIFEKF---ASAGEAYQVIDVQEATLQNIIEFPPEGAFTVESKI 152
BLAST of mRNA_C-tenellus_contig11372.2.1 vs. uniprot
Match: A0A7S2RAR6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAR6_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 8.840e-9 Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 1 KTQLLEAVQCTGRGVSTSTEQREEIDRLITALEAVNPTPNS---GSSSLLSARWDLRWTSEREVLFLIEKGFFGLDTGVVFQAIDVEQGTLENTLLFEGGSFFSVGSSI 318 K ++L + T RGV+ + EQ++ +D L+ AL A P S +S RWDLR+T+E E+L L+ G +V Q +DV LEN + +E G F V S++ Sbjct: 92 KEEILNLAEETNRGVTATVEQKQAMDALVDALLAATPDGEKRGLASDPRISTRWDLRYTTEAELLVLM-----GSRATLVTQVLDVPGAGLENLVQWENGVEFLVDSTL 195
BLAST of mRNA_C-tenellus_contig11372.2.1 vs. uniprot
Match: C1MVG1_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MVG1_MICPC) HSP 1 Score: 60.5 bits (145), Expect = 1.010e-8 Identity = 37/94 (39.36%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 1 KTQLLEAVQCTGRGVSTSTEQREEIDRLITALEAVNPTPNSGSS---SLLSARWDLRWTSEREVLFLI-EKGFFGLDTGVVFQAIDVEQGTLEN 270 K+QL++AV T RG++ S R I+ LI LEA NPTP+ ++ + L+ W + +TS E+L L+ + G+ G + Q IDV GT+EN Sbjct: 4 KSQLMDAVAGTKRGLAASGAARARINELIATLEASNPTPSPATADGAAGLAGEWKIAYTSASELLLLLASENLPGVTIGDITQTIDVVAGTVEN 97 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11372.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11372.2.1 >prot_C-tenellus_contig11372.2.1 ID=prot_C-tenellus_contig11372.2.1|Name=mRNA_C-tenellus_contig11372.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=106bp KTQLLEAVQCTGRGVSTSTEQREEIDRLITALEAVNPTPNSGSSSLLSARback to top mRNA from alignment at C-tenellus_contig11372:1106..2282- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11372.2.1 ID=mRNA_C-tenellus_contig11372.2.1|Name=mRNA_C-tenellus_contig11372.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1177bp|location=Sequence derived from alignment at C-tenellus_contig11372:1106..2282- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11372:1106..2282- >mRNA_C-tenellus_contig11372.2.1 ID=mRNA_C-tenellus_contig11372.2.1|Name=mRNA_C-tenellus_contig11372.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=318bp|location=Sequence derived from alignment at C-tenellus_contig11372:1106..2282- (Choristocarpus tenellus KU2346)back to top |