mRNA_C-tenellus_contig11326.1.4 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11326.1.4 vs. uniprot
Match: D8LK81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK81_ECTSI) HSP 1 Score: 183 bits (464), Expect = 1.810e-53 Identity = 99/168 (58.93%), Postives = 108/168 (64.29%), Query Frame = 3 Query: 159 MNLKEHVLEELELHEYYVRDALQCLLHTVLFIRAPGALRPREVGDECNFFRLRNERVHLSHLYQPYGVARCFDSILCVPTIASSYSPRNATLHTPTQVDGAMEGFWQSLSPAGPDLAKGWITISFFMRRVKKSIFGLMLKEEKVVWEQWVIPVLVNTAMRPLEDDQAS 662 MNLKEHVLEELELHEYYVRDALQCLLHT+LF+RAPG+LRPRE C F L ARC VDGA+E FW+SL PAGPDL+KGWI +SFFMRR KKS FGL LKEEKVVWEQWV+PVLVNT+ RP E D S Sbjct: 1 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRE--SHCENFGL--------------SFARC------------------GARDVDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKS-FGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTS 133
BLAST of mRNA_C-tenellus_contig11326.1.4 vs. uniprot
Match: A0A6H5J856_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J856_9PHAE) HSP 1 Score: 179 bits (455), Expect = 3.340e-51 Identity = 98/168 (58.33%), Postives = 107/168 (63.69%), Query Frame = 3 Query: 159 MNLKEHVLEELELHEYYVRDALQCLLHTVLFIRAPGALRPREVGDECNFFRLRNERVHLSHLYQPYGVARCFDSILCVPTIASSYSPRNATLHTPTQVDGAMEGFWQSLSPAGPDLAKGWITISFFMRRVKKSIFGLMLKEEKVVWEQWVIPVLVNTAMRPLEDDQAS 662 MNLKEHVLEELELHEYYVRDALQCLLHT+LF+RAPG+LRPRE C F L ARC VD A+E FW+SL PAGPDL+KGWI +SFFMRR KKS FGL LKEEKVVWEQWV+PVLVNT+ RP E D S Sbjct: 1 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRE--SHCENFGL--------------SFARC------------------GARDVDVAVDRALEEFWRSLRPAGPDLSKGWIAVSFFMRREKKS-FGLFLKEEKVVWEQWVVPVLVNTSPRPTEADDTS 133
BLAST of mRNA_C-tenellus_contig11326.1.4 vs. uniprot
Match: A0A835ZG30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG30_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.300e-36 Identity = 83/177 (46.89%), Postives = 103/177 (58.19%), Query Frame = 3 Query: 159 MNLKEHVLEELELHEYYVRDALQCLLHTVLFIRAPGALRPREVGDECNFFRLRNERVHLSHLYQP-YGVARCFDSILCVPTIASSYSPRNATLHTPTQVDGAMEGFWQSLSP--------AGPDLAKGWITISFFMRRVKKSIFGLMLKEEKVVWEQWVIPVLVNTAMRPLEDDQAS 662 MNLKEHVLEE+ELHE +VRDALQCLLHT+LF+RAPG LRPRE C++F L R Y P + DS + + A + Q L P PDL+KGW+T+SFF RR+KK++FGLM EEK+ WEQWV+PVLV+ A P D+AS Sbjct: 1 MNLKEHVLEEVELHESHVRDALQCLLHTILFVRAPGPLRPREA--HCDYFDLTYAR------YAPTWNRHLPTDSNRVLTVLVXXXXXXXXXXXXXXXXVRAHDPQHQPLKPLVKDLLAACWPDLSKGWVTLSFFERRIKKTMFGLMSNEEKIAWEQWVVPVLVSGAPLPTGADEAS 169
BLAST of mRNA_C-tenellus_contig11326.1.4 vs. uniprot
Match: A0A7S2UB45_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB45_9STRA) HSP 1 Score: 132 bits (331), Expect = 8.390e-33 Identity = 74/170 (43.53%), Postives = 98/170 (57.65%), Query Frame = 3 Query: 159 MNLKEHVLEELELHEYYVRDALQCLLHTVLFIRAPGALRPREVGDECNFFRLRNERVHLSHLYQPYGVARCFDSILCVPTIASSYSPRNATLH--TPTQVDGAMEGFWQSLSPAGPDLAKGWITISFFMRRVKKSIFGLMLKEEKVVWEQWVIPVLVNTAMRPLEDDQAS 662 MN KEH L ELEL Y VR+ALQC+LHT+LFIR+PG + PR+V C F L R IAS R+ L +VD A+E F +SLS GP+L G +T+SFF RR + +FGL+ E+K++WEQW++ V+VN RP+ DD+AS Sbjct: 1 MNCKEHHLPELELATYQVREALQCILHTILFIRSPGPVAPRDV--HCEGFDLTYTR------------------------IASDSENRSNRLEFDVDKKVDDAIESFLRSLSQIGPELLSGCLTLSFFERRATRQLFGLVSHEDKIIWEQWILRVVVNNTPRPVNDDKAS 144
BLAST of mRNA_C-tenellus_contig11326.1.4 vs. uniprot
Match: A0A1Z5KEC3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEC3_FISSO) HSP 1 Score: 130 bits (326), Expect = 1.940e-32 Identity = 71/168 (42.26%), Postives = 98/168 (58.33%), Query Frame = 3 Query: 159 MNLKEHVLEELELHEYYVRDALQCLLHTVLFIRAPGALRPREVGDECNFFRLRNERVHLSHLYQPYGVARCFDSILCVPTIASSYSPRNATLHTPTQVDGAMEGFWQSLSPAGPDLAKGWITISFFMRRVKKSIFGLMLKEEKVVWEQWVIPVLVNTAMRPLEDDQAS 662 MN KEH L ELEL VR ALQC+LHT+LF+R+PG + P++V EC F L R+ +H QP P A + +VD A+E F ++LS GP+L G +T+SFF RR + +FGL+ EE+VV+EQWV+ V+VN RP+ +D A+ Sbjct: 1 MNCKEHYLPELELSTAQVRSALQCILHTILFLRSPGPVTPKDV--ECEDFNLTYARIANNHQNQP-------------PNKAMGNIVHSLENDIDQKVDDAIESFLRTLSQIGPELLSGCLTVSFFERRATRQLFGLVSHEERVVFEQWVMRVVVNNTPRPISNDSAA 153
BLAST of mRNA_C-tenellus_contig11326.1.4 vs. uniprot
Match: A0A1Z5KIE0_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIE0_FISSO) HSP 1 Score: 130 bits (326), Expect = 5.680e-32 Identity = 71/168 (42.26%), Postives = 98/168 (58.33%), Query Frame = 3 Query: 159 MNLKEHVLEELELHEYYVRDALQCLLHTVLFIRAPGALRPREVGDECNFFRLRNERVHLSHLYQPYGVARCFDSILCVPTIASSYSPRNATLHTPTQVDGAMEGFWQSLSPAGPDLAKGWITISFFMRRVKKSIFGLMLKEEKVVWEQWVIPVLVNTAMRPLEDDQAS 662 MN KEH L ELEL VR ALQC+LHT+LF+R+PG + P++V EC F L R+ +H QP P A + +VD A+E F ++LS GP+L G +T+SFF RR + +FGL+ EE+VV+EQWVI ++VN RP+ +D A+ Sbjct: 1 MNCKEHYLPELELSTAQVRSALQCILHTILFLRSPGPVTPKDV--ECEDFNLTYARIANNHQNQP-------------PNKAMGNIVHSLENDIDQKVDDAIESFLRTLSQIGPELLSGCLTVSFFERRATRQLFGLVSHEERVVFEQWVIRLVVNNTPRPISNDSAA 153
BLAST of mRNA_C-tenellus_contig11326.1.4 vs. uniprot
Match: A0A7S2I1L3_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2I1L3_9STRA) HSP 1 Score: 129 bits (325), Expect = 8.810e-32 Identity = 74/168 (44.05%), Postives = 102/168 (60.71%), Query Frame = 3 Query: 159 MNLKEHVLEELELHEYYVRDALQCLLHTVLFIRAPGALRPREVGDECNFFRLRNERVHLSHLYQPYGVARCFDSILCVPTIASSYSPRNATLHTPTQVDGAMEGFWQSLSPAGPDLAKGWITISFFMRRVKKSIFGLMLKEEKVVWEQWVIPVLVNTAMRPLEDDQAS 662 MN +EH + ELEL VR+ALQ +LHT+LFIR+PG + PR+V C F L R+ + P R D TI+ S S N +VDGA+E F +SL+ GP+L G +T++FF RR + +FGL+ EE+VVWEQW++ V+VN RP+ DD+AS Sbjct: 1 MNCREHHIPELELATGQVREALQAILHTILFIRSPGPVAPRDVN--CEGFDLTYNRIATNDGTPPTST-RSLDG----RTISRSSSLEN---DVDKKVDGAIEVFLRSLTQIGPELLSGCLTLAFFERRATRQLFGLVSHEERVVWEQWILRVVVNNTPRPVNDDKAS 158
BLAST of mRNA_C-tenellus_contig11326.1.4 vs. uniprot
Match: A0A7S0FIE9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIE9_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.540e-29 Identity = 72/168 (42.86%), Postives = 95/168 (56.55%), Query Frame = 3 Query: 159 MNLKEHVLEELELHEYYVRDALQCLLHTVLFIRAPGALRPREVGDECNFFRLRNERVHLSHLYQPYGVARCFDSILCVPTIASSYSPRNATLHTPTQVDGAMEGFWQSLSPAGPDLAKGWITISFFMRRVKKSIFGLMLKEEKVVWEQWVIPVLVNTAMRPLEDDQAS 662 MN KEH L ELEL VR+ALQ LHT+LFIR+PG + PR+V C F L R+ + + + V + L +VD A+E F +SL+ GP+L G +T+SFF RR K +FGLM EE+VVWEQW+I V+VN RP+ +D AS Sbjct: 1 MNCKEHHLPELELATGQVREALQTALHTILFIRSPGPVAPRDV--HCEGFDLTYTRIETPDGQRSWSQQAAGGGVGGVGGGVQQQIALESDLDR--RVDDAIENFLRSLTQIGPELLSGCLTLSFFERRASKQLFGLMNHEERVVWEQWIIRVVVNNTPRPVGEDSAS 164
BLAST of mRNA_C-tenellus_contig11326.1.4 vs. uniprot
Match: A0A7S4VM27_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VM27_9STRA) HSP 1 Score: 120 bits (301), Expect = 6.710e-29 Identity = 71/170 (41.76%), Postives = 100/170 (58.82%), Query Frame = 3 Query: 159 MNLKEHVLEELELHEYYVRDALQCLLHTVLFIRAPGALRPREVGDECNFFRLRNERVHLSH--LYQPYGVARCFDSILCVPTIASSYSPRNATLHTPTQVDGAMEGFWQSLSPAGPDLAKGWITISFFMRRVKKSIFGLMLKEEKVVWEQWVIPVLVNTAMRPLEDDQAS 662 MN +EH + ELEL VR+ALQ +LHT+LFIR+PG + PR+V C F L R+ + + G R +I+ S S N +VD A+E F +SL+ GP+L G +T+ FF RR + +FGL+ EE+VVWEQW++ V+VN RP+ DD+AS Sbjct: 1 MNCREHHIPELELATGQVREALQAILHTILFIRSPGPVAPRDV--HCEGFDLTYTRIATNDGSSIRSDGGGR---------SISRSISIEN---DLDKKVDDAIEVFLRSLTQIGPELLSGCLTLGFFERRATRQLFGLVSHEERVVWEQWILRVVVNNTPRPVNDDKAS 156
BLAST of mRNA_C-tenellus_contig11326.1.4 vs. uniprot
Match: A0A1E7F556_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F556_9STRA) HSP 1 Score: 121 bits (303), Expect = 9.140e-29 Identity = 69/168 (41.07%), Postives = 92/168 (54.76%), Query Frame = 3 Query: 159 MNLKEHVLEELELHEYYVRDALQCLLHTVLFIRAPGALRPREVGDECNFFRLRNERVHLSHLYQPYGVARCFDSILCVPTIASSYSPRNATLHTPTQVDGAMEGFWQSLSPAGPDLAKGWITISFFMRRVKKSIFGLMLKEEKVVWEQWVIPVLVNTAMRPLEDDQAS 662 MN KEH L ELEL VR+ALQ +L+T+LFIR+PG + PR+V EC F L P IA+S S +VD +++ F LS GP+L G +T+SFF RR + +FGL+ EE+VVWEQW + V+VN RP+ DD A+ Sbjct: 1 MNCKEHYLPELELATGQVREALQAILYTILFIRSPGPVSPRDV--ECEGF-----------------------DFLTYPRIATSSSLSTLNYDVDKRVDQSIQNFLMKLSQIGPELLSGGLTLSFFERRKTQQLFGLVSNEERVVWEQWHLRVVVNNTPRPVSDDSAA 143 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11326.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11326.1.4 >prot_C-tenellus_contig11326.1.4 ID=prot_C-tenellus_contig11326.1.4|Name=mRNA_C-tenellus_contig11326.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=190bp MNLKEHVLEELELHEYYVRDALQCLLHTVLFIRAPGALRPREVGDECNFFback to top mRNA from alignment at C-tenellus_contig11326:57..2070- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11326.1.4 ID=mRNA_C-tenellus_contig11326.1.4|Name=mRNA_C-tenellus_contig11326.1.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2014bp|location=Sequence derived from alignment at C-tenellus_contig11326:57..2070- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11326:57..2070- >mRNA_C-tenellus_contig11326.1.4 ID=mRNA_C-tenellus_contig11326.1.4|Name=mRNA_C-tenellus_contig11326.1.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=570bp|location=Sequence derived from alignment at C-tenellus_contig11326:57..2070- (Choristocarpus tenellus KU2346)back to top |