mRNA_C-tenellus_contig11283.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11283.1.1 vs. uniprot
Match: D7FT91_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT91_ECTSI) HSP 1 Score: 147 bits (371), Expect = 2.950e-38 Identity = 97/219 (44.29%), Postives = 119/219 (54.34%), Query Frame = 1 Query: 4 TGTENDVGLRAGKLTLDGVKNIRDLSSVTGSGIHAGRVFRTGNLSQATEADITRLKEEMYIRTLIDLRSRTETMMDKQLHSHVYRDYVDV--------------------------ELNLRGRTSGEKAAWVWPGGRGVGGXXXNRSVIQEDSRRRYFVSLIDESIYKKGIFQKLRKRHKAAVVALAPAAPLSKRCMKKAKGYFMAKINDGGLVLLNEV 582 T DV L+GV+NIRDLSSV G GI AGRVFRTG+LS ATE D +DLRS TE D+ +H VY +V+V L ++G+ G A G XXX YFVSLIDESIYKKG+FQ+LR+RHKAAV+ALAPA +S+RC +KA+G F+ +IN GGLVLLNE+ Sbjct: 193 TAAAADVARERDPFVLEGVQNIRDLSSVEGYGIVAGRVFRTGHLSAATERDAKTXXXXXXXXXXVDLRSATELGHDELIHGDVYEGFVNVGGGDHSGTGVSQGPAWDEAIQGESNDALPVQGKVGGASAG---AGXXXXXXXXXXXXXXXXXXXXXYFVSLIDESIYKKGVFQRLRRRHKAAVLALAPATMVSRRCTQKARGIFLREINAGGLVLLNEL 408
BLAST of mRNA_C-tenellus_contig11283.1.1 vs. uniprot
Match: W7TPH7_9STRA (Tyrosine-protein phosphatase family, C-terminal domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPH7_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.710e-31 Identity = 80/187 (42.78%), Postives = 110/187 (58.82%), Query Frame = 1 Query: 22 VGLRAGKLTLDGVKNIRDLSSVTGSGIHAGRVFRTGNLSQATEADITRLKEEMYIRTLIDLRSRTETMMDKQLHSHVYRDYVDVELNLRGRTSGEKAAWVWPGGRGVGGXXXNRSVIQEDSRRRYFVSLIDESIYKKGIFQKLRKRHKAAVVALAPAAPLSKRCMKKAKGYFMAKINDGGLVLLNEV 582 VG+ G + L+ VKNIRDLSSV GSGI AGR++RTG LS+A+E DI ++E +TLIDLRS E MD Q++S + R G K A SV+Q R+F+S+IDE IY++G+F++L KR KAA + L +SKR ++A+ F+ IND GL LLN++ Sbjct: 120 VGMVTGGIKLERVKNIRDLSSVRGSGIKAGRIYRTGYLSKASEEDIKFIRETAKFKTLIDLRSEKELGMDDQMNSSATK-----------RGCGGKNAETVRVDPSPAPSTGQTSVLQ-----RHFISVIDEGIYQRGVFKRLAKRKKAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDL 290
BLAST of mRNA_C-tenellus_contig11283.1.1 vs. uniprot
Match: A0A7S2NYU5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NYU5_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.260e-24 Identity = 72/182 (39.56%), Postives = 102/182 (56.04%), Query Frame = 1 Query: 58 VKNIRDLSSVTGSGIHAGRVFRTGNLSQATEADITRLKEEMYIRTLIDLRSRTETMMDKQLHSHVYRDYVDVELNLRGRTSGEKAAW------VWPGGRGVGGXXXNRSVIQEDSRR-RYFVSLIDESIYKKGIFQKLRKRHKAAVVALAPAAPLSKRCMKKAKGYFMAKINDGGLVLLNEV 582 +KN RDL+S S I RV+R G ++ ATE D+ L +E+ +RTL+DLRSRTE + D+ H + D D + +S E+ + W +GV V+ ++SR+ R+FVSL+DE Y +G KLRKR A V +P A +SKR K F+ +IN GGL LLNE+ Sbjct: 76 IKNARDLNSCNNSPIMPNRVYRMGKVTDATEQDMDILFDELNVRTLVDLRSRTE-LRDEMNGVHAHHDEEDSGADAA-LSSSERDVFEGFHDLTWSERKGVRSLNKTDEVLLDESRKERHFVSLMDEIKYVRGTLSKLRKRDIAKAVLKSPGAVVSKRVRGNVKSIFLDEINAGGLPLLNEL 255
BLAST of mRNA_C-tenellus_contig11283.1.1 vs. uniprot
Match: A0A7S2UX35_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX35_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.410e-24 Identity = 72/201 (35.82%), Postives = 105/201 (52.24%), Query Frame = 1 Query: 49 LDGVKNIRDLSSVTGSGIHAGRVFRTGNLSQATEADITRLKEEMYIRTLIDLRSRTETMMDKQLHSHVYRDYVDVEL------------NLRGRTS-----------GEKAAWVWPGGRGVGGXXXNRSVIQEDSRRRYFVSLIDESIYKKGIFQKLRKRHKAAVVALAPAAPLSKRCMKKAKGYFMAKINDGGLVLLNEV 582 L+ VKN RDL++V GS I GRV RTG LS AT D+ L E++ ++T+IDLRS E DK S ++ + V+ + R R G+ AAW + ++ + +RYF+SL++ES+YKKG+ +L R KAA V A +S R K+A+ + K+N+GGL LLNE+ Sbjct: 65 LENVKNCRDLANVKGSPIKPGRVLRTGFLSNATSKDVKNLLEKLGLKTVIDLRSPREIDDDKHEGS-IFESFQSVDWTEDQQRRKWERRSKRSRAKYLVQRAAMELQGKAAAWNYRKKMSEKREKEREETMRAKASQRYFISLMNESLYKKGVISRLGNRQKAAAVMYLAGAVVSTRAYKRARSLVLKKVNEGGLGLLNEL 264
BLAST of mRNA_C-tenellus_contig11283.1.1 vs. uniprot
Match: A0A7S4PPL8_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PPL8_GUITH) HSP 1 Score: 96.3 bits (238), Expect = 3.470e-20 Identity = 68/181 (37.57%), Postives = 102/181 (56.35%), Query Frame = 1 Query: 49 LDGVKNIRDLSSVTGSGIHAGRVFRTGNLSQATEADITRLKEEMYIRTLIDLRSRTETMMDK-QLHSHVYRDYVDVELNLRGRTSGEKAAWVWPGGRGVGGXXXNRSVIQEDSRRRYFVSLIDESIYKKGIFQK--LRKRHKAAVVALAPAAPLSKRCMKKAKGYFMAKINDGGLVLLNEV 582 L+ V+NIRDLSSVT S + GRVFRT + A+E+D + E I+TLIDLRS E MD + +S V++ Y D+ ++ +G+ A + S +E R R+ +S+IDE+IYK+G+F++ LRK+ KA + KA+ +F+ IN+ GL LLNE+ Sbjct: 74 LECVQNIRDLSSVTNSPVKPGRVFRTACVGTASESDACLIVEN--IKTLIDLRSEKEYGMDSVKYNSSVWQQYDDLIYEVKKSKTGKPKALI------------PSSPAKEPMRARHMLSVIDEAIYKRGVFKRMSLRKKIKAGIYRAVSYT--------KARSFFIEYINNAGLPLLNEL 232
BLAST of mRNA_C-tenellus_contig11283.1.1 vs. uniprot
Match: A0A7S1VK86_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VK86_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.280e-16 Identity = 71/226 (31.42%), Postives = 106/226 (46.90%), Query Frame = 1 Query: 43 LTLDGVKNIRDLSSVTGSGIHAGRVFRTGNLSQATEADITRLKEEMYIRTLIDLRSRTETMMDKQLH-SHVYRDYVDVELNLRGR------------TSGEKAAWVWPGGRG--------------------------------VGGXXXNRSVIQEDSRR-RYFVSLIDESIYKKGIFQKLRKRHKAAVVALAPAAPLSKRCMKKAKGYFMAKINDGGLVLLNEV 582 L+L+ VKN RDL+S GS + R+ R G L AT D+ L ++ I+T++DLRS TE D+ L S V+ D+ +V RGR S ++ W W VGG + + SR+ R+FVSL++E Y +G ++RKR A + AP A +S+R K F+ +INDGGL+++NE+ Sbjct: 83 LSLEKVKNGRDLASPIGSPVKPNRMIRIGRLGAATPKDMDLLFNKLGIQTIVDLRSPTELKEDESLQRSEVFSDFYNVLWTERGRKRDGCLRELGVLASPLRSRW-WKSKSDTDITGSDEQEDEEIVKEVINLVEESNCNECDEVGGVSAAEFLAKAPSRKERHFVSLMNEFKYVRGTMSRVRKRDIARTIIKAPGALVSRRVRASVKKPFLDRINDGGLLMVNEL 307
BLAST of mRNA_C-tenellus_contig11283.1.1 vs. uniprot
Match: A0A7S0NC98_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0NC98_9CRYP) HSP 1 Score: 83.2 bits (204), Expect = 1.220e-15 Identity = 68/182 (37.36%), Postives = 101/182 (55.49%), Query Frame = 1 Query: 46 TLDGVKNIRDLSSVTGSGIHAGRVFRTGNLSQATEADITRLKEEMYIRTLIDLRSRTETMMDK-QLHSHVYRDYVDVELNLRGRTSGEKAAWVWPGGRGVGGXXXNRSVIQEDSRRRYFVSLIDESIYKKGIFQKLR--KRHKAAVVALAPAAPLSKRCMKKAKGYFMAKINDGGLVLLNEV 582 +L+ VKN+RDL+SVTGS + GR FR L A++AD + + + I+TL+DLRS E D + +S V+ +Y ++ ++ SG V P + G R R+ VS+IDE +YK+G+F+KL K+ KAAV LS+ ++K F+ IND GL LLNE+ Sbjct: 81 SLECVKNVRDLASVTGSPVKPGRCFRASCLGTASKADESLITKN--IKTLVDLRSEKEFSTDSTKYNSTVFDEYDNLLYEVKYSKSGRPKELV-PKVSSIDG-----------ERSRHMVSVIDEKLYKRGVFKKLGLGKKLKAAVYM-----GLSQTKLRK---LFIDFINDAGLPLLNEL 240
BLAST of mRNA_C-tenellus_contig11283.1.1 vs. uniprot
Match: L1IUB0_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IUB0_GUITC) HSP 1 Score: 74.7 bits (182), Expect = 1.050e-12 Identity = 55/160 (34.38%), Postives = 86/160 (53.75%), Query Frame = 1 Query: 112 RVFRTGNLSQATEADITRLKEEMYIRTLIDLRSRTETMMDK-QLHSHVYRDYVDVELNLRGRTSGEKAAWVWPGGRGVGGXXXNRSVIQEDSRRRYFVSLIDESIYKKGIFQK--LRKRHKAAVVALAPAAPLSKRCMKKAKGYFMAKINDGGLVLLNEV 582 RVFRT + A+E+D + E I+TLIDLRS E MD + +S V++ Y D+ ++ +G+ A + S +E R R+ +S+IDE+IYK+G+F++ LRK+ KA + KA+ +F+ IN+ GL LLNE+ Sbjct: 11 RVFRTACVGTASESDACLIVEN--IKTLIDLRSEKEYGMDSVKYNSSVWQQYDDLIYEVKKSKTGKPKALI------------PSSPAKEPMRARHMLSVIDEAIYKRGVFKRMSLRKKIKAGIYRAVSYT--------KARSFFIEYINNAGLPLLNEL 148
BLAST of mRNA_C-tenellus_contig11283.1.1 vs. uniprot
Match: A0A7S1EEI9_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EEI9_HEMAN) HSP 1 Score: 72.8 bits (177), Expect = 7.210e-12 Identity = 57/176 (32.39%), Postives = 88/176 (50.00%), Query Frame = 1 Query: 58 VKNIRDLSSVTGSGIHAGRVFRTGNLSQATEADITRLKEEMYIRTLIDLRSRTETMMDK-QLHSHVYRDYVDVELNLRGRTSGEKAAWVWPGGRGVGGXXXNRSVIQEDSRRRYFVSLIDESIYKKGIFQKLRKRHKAAVVALAPAAPLSKRCMKKAKGYFMAKINDGGLVLLNEV 582 VKN+RDL+SV S I GRV R + A+ D + + ++TL+DLRS E D + +S ++ +Y + ++ SG A + N + R R+ +S+IDESIYK+G+F+KL + KA + M +A+ F+ IN GL LLNE+ Sbjct: 23 VKNVRDLASVGNSPIKPGRVLRAACIGTASPNDEGIILDT--VKTLVDLRSEQEYSGDMIKYNSSIFDEYDSLFYTVKKSKSGRPKALI----------PNNEATAP---RTRHLLSVIDESIYKRGVFKKLSLKKKAKAALYLGVS------MVRARKVFLDYINAAGLPLLNEL 177
BLAST of mRNA_C-tenellus_contig11283.1.1 vs. uniprot
Match: A0A4D9D8L3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8L3_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.370e-11 Identity = 44/123 (35.77%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 226 MDKQLHSHVYRDYVDVELNLRGRTSGEKAAWVWPGGRGVGGXXXNRSVI----QEDSRRRYFVSLIDESIYKKGIFQKLRKRHKAAVVALAPAAPLSKRCMKKAKGYFMAKINDGGLVLLNEV 582 MD Q++S VY Y WVW G+ + S Q + +R+F+S+IDESIY++G+F++L KR KAA + L +SKR ++A+ F+ IND GL LLN++ Sbjct: 1 MDDQMNSSVYDGY---------------ETWVW--GKNAETVRVDPSPAPSSGQTSALQRHFISVIDESIYQRGVFKRLAKRKKAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDL 106 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11283.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11283.1.1 >prot_C-tenellus_contig11283.1.1 ID=prot_C-tenellus_contig11283.1.1|Name=mRNA_C-tenellus_contig11283.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=194bp MTGTENDVGLRAGKLTLDGVKNIRDLSSVTGSGIHAGRVFRTGNLSQATEback to top mRNA from alignment at C-tenellus_contig11283:293..3601- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11283.1.1 ID=mRNA_C-tenellus_contig11283.1.1|Name=mRNA_C-tenellus_contig11283.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3309bp|location=Sequence derived from alignment at C-tenellus_contig11283:293..3601- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11283:293..3601- >mRNA_C-tenellus_contig11283.1.1 ID=mRNA_C-tenellus_contig11283.1.1|Name=mRNA_C-tenellus_contig11283.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=582bp|location=Sequence derived from alignment at C-tenellus_contig11283:293..3601- (Choristocarpus tenellus KU2346)back to top |