mRNA_C-tenellus_contig1127.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1127.1.1
Unique NamemRNA_C-tenellus_contig1127.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: A0A6H5JQX9_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQX9_9PHAE)

HSP 1 Score: 419 bits (1077), Expect = 1.160e-139
Identity = 205/269 (76.21%), Postives = 237/269 (88.10%), Query Frame = 1
Query:   55 SAMESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLEHTKQVSV 861
            S+ E+ + V++M  V KQLPGGR+LF +ASL+F  GAKIGVLGVNGSGKSTVLKI+AG+DKE DG++W ++GLRVKYL QEPDLD +LNVMDNIR GIAEQE LV RFEE  ++MGDP+ADLDALL EQ+ LQ++I++ADAW LQHRVDI+MRKLRVPPGDSPV QLSGGEKRRVALCRLLLE PD++LLDEPTNHLDAESV WLE+YLR+FKGTVISITHDRYFLDNVA WILEVDRG L+P++GNYS WL QKQ RLD EH+KQ  V
Sbjct:  163 SSTETTETVITMDGVSKQLPGGRQLFADASLTFMRGAKIGVLGVNGSGKSTVLKIIAGEDKEFDGDMWTRDGLRVKYLPQEPDLDSSLNVMDNIRRGIAEQEDLVARFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFKGTVISITHDRYFLDNVAGWILEVDRGSLLPFRGNYSAWLVQKQNRLDREHSKQAQV 431          
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: D7FX01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX01_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 2.420e-139
Identity = 201/258 (77.91%), Postives = 230/258 (89.15%), Query Frame = 1
Query:   88 MKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLEHTKQVSV 861
            M  V KQLPGGR+LF +ASL+F  GAKIGVLGVNGSGKSTVLKI+AG+DKE DG++W ++GLRVKYL QEPDLD +LNVM+NIR GIAEQE++V RFEE  ++MGDP+ADLDALL EQ+ LQ++I++ADAW LQHRVDI+MRKLRVPPGDSPV QLSGGEKRRVALCRLLLE PD++LLDEPTNHLDAESV WLE+YLR+FKGTVISITHDRYFLDNVA WILEVDRG L+P+KGNYS WL QKQ RLD EH+KQ  V
Sbjct:    1 MDGVSKQLPGGRQLFADASLTFMRGAKIGVLGVNGSGKSTVLKIIAGEDKEFDGDMWTRDGLRVKYLPQEPDLDSSLNVMENIRRGIAEQENMVARFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFKGTVISITHDRYFLDNVAGWILEVDRGSLLPFKGNYSAWLVQKQNRLDREHSKQAQV 258          
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: A0A835ZAC8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC8_9STRA)

HSP 1 Score: 347 bits (890), Expect = 3.580e-113
Identity = 166/259 (64.09%), Postives = 209/259 (80.69%), Query Frame = 1
Query:   64 ESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840
            +S + V+S+  V K+LPGGR LF   SL+F HGAKIGVLG NG GKS+++KILAG D E DG +W + GL++ YL QEP LD +L+VM N+R+GIAEQE+L+ RF+ +S +MGDP+AD DALL EQ+ LQ+RID+  AW LQH V+I+M +L VPP  +PVA LSGGE+RRVALCR+LLE PD+++LDEPTNHLDAE   WLE YL++F+G VIS+THDRYFLDNVASWILE+DRG  IPY+GNYS WL  KQ RL++E
Sbjct:   37 QSAEVVLSLVDVRKRLPGGRTLFDGVSLNFNHGAKIGVLGANGCGKSSLMKILAGLDAEFDGALWRRPGLKILYLPQEPQLDPDLDVMGNVRLGIAEQEALLARFDAISAAMGDPDADFDALLTEQAALQTRIDDLGAWALQHEVEIAMARLHVPPPRAPVASLSGGERRRVALCRMLLEKPDVLILDEPTNHLDAECTRWLETYLQAFRGMVISVTHDRYFLDNVASWILEIDRGATIPYEGNYSAWLAAKQRRLNVE 295          
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: A0A8K1FE21_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE21_PYTOL)

HSP 1 Score: 331 bits (849), Expect = 5.960e-107
Identity = 160/256 (62.50%), Postives = 202/256 (78.91%), Query Frame = 1
Query:   73 DYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840
            D+V  +K VG  +PGG++LF   SL F  GAKIGVLG NG+GKST+LKI+AG  KE DGE W+K+GLRV YL+QEP LD N NV +NI  G+ E   L+ RF+EVS++MG+P+AD D LLAEQ+ELQ +ID  + W L H V+ +M  LRVPP D  V  LSGGE+RRVALCRLLLE PD++LLDEPTNHLDAESV WLEE+L+++KGTV+SITHDRYFLDNVA W+LE+DRG    Y+GNY++WL Q++ RL+++
Sbjct:   53 DFVCHLKDVGVTIPGGKKLFERVSLGFLRGAKIGVLGPNGTGKSTLLKIIAGVRKEFDGERWVKDGLRVGYLAQEPYLDPNKNVYENIMDGLKETTDLLERFDEVSMAMGEPDADFDTLLAEQAELQDKIDHLNCWDLSHEVEKAMAALRVPPRDGDVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEEFLQNYKGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTKWLQQRRNRLNMQ 308          
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: W7TRE6_9STRA (Abc transporter atp-binding protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRE6_9STRA)

HSP 1 Score: 331 bits (849), Expect = 6.290e-107
Identity = 158/275 (57.45%), Postives = 212/275 (77.09%), Query Frame = 1
Query:   34 GGAKGGSSAMESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLEHTKQVS 858
            GG    S+A  + + + S+  V K LPGGR L  +  LSF  GAKIGVLGVNGSGKS++LKI++G D+EH G VW K  ++  YL+QEP LD  L+V  N+R+GIAEQE+LV++F+E+++ MG+ +ADLD LL EQ+ELQ RI+  D W ++HRVD  M+ L +PP D+ +  LSGGE+RRVALCR+LLE PD++LLDEPTNHLDA+SV WLE +L+ ++GTVI++THDRYFLDN+A W+LEVDRG L+P++GNY++WL  K  RLDLE  K+ +
Sbjct:   31 GGGSNPSNAPSTGEIICSLSDVTKVLPGGRVLLKDTRLSFFRGAKIGVLGVNGSGKSSLLKIISGVDQEHHGVVWRKPDVKFMYLAQEPQLDPALDVKGNVRLGIAEQEALVQKFDEIAMKMGETDADLDKLLEEQAELQGRIEALDCWNVEHRVDTVMKALHLPPPDASIISLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVAWLERFLQEYRGTVIAVTHDRYFLDNIARWVLEVDRGSLLPFQGNYTQWLEHKAARLDLERGKEAA 305          
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: A0A248JNM2_9PROT (Energy-dependent translational throttle protein EttA n=7 Tax=Nitrospirillum TaxID=1543705 RepID=A0A248JNM2_9PROT)

HSP 1 Score: 327 bits (838), Expect = 1.100e-105
Identity = 162/260 (62.31%), Postives = 197/260 (75.77%), Query Frame = 1
Query:   61 MESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840
            M S  YV  MK V K  PGGR++F N  LSF  GAKIGVLGVNGSGKST+LKI+AG DK+++GE W  +G+ V YL QEP LD N NV +N+   +   + L+ RF EVS +M DP+AD DAL+AEQ+ELQ +ID ADAW ++  VDI+M  LR PPGD+ V +LSGGEKRRVALC+LLL  PD++LLDEPTNHLDAESV WL+ +L  +KGTV+ +THDRYFLDNV  WILE+DRG  IPY+GNYS WL QK+ RL  E
Sbjct:    1 MASYQYVYVMKGVTKVYPGGRKVFENIWLSFYPGAKIGVLGVNGSGKSTLLKIMAGLDKDYNGEAWAADGVSVGYLPQEPQLDPNKNVQENVMDALGATKGLLDRFNEVSNAMADPDADFDALIAEQAELQEKIDAADAWDIERTVDIAMDALRCPPGDADVTKLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVAWLQRFLADYKGTVVMVTHDRYFLDNVTGWILELDRGSGIPYEGNYSSWLEQKEKRLAQE 260          
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: UPI0015D4E6C7 (energy-dependent translational throttle protein EttA n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D4E6C7)

HSP 1 Score: 323 bits (829), Expect = 2.470e-104
Identity = 163/260 (62.69%), Postives = 196/260 (75.38%), Query Frame = 1
Query:   61 MESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840
            M S  YV  MK + K  PGG+++  N  LSF  GAKIGV+GVNGSGKST+LKI+AG DK+++GE W  EG +V YL QEP LD +  V +N+   + E +SLV RF EVS  M +P+AD DALL EQ+ELQ +ID ADAW L+  VDI+M  LR PPGDS V +LSGGEKRRVALC+LLLE PD++LLDEPTNHLDAESV WLE +L  +KGTV+ +THDRYFLDNV  WILE+DRG  IPY+G YS WL QKQ RL+ E
Sbjct:    1 MASYQYVYVMKGLTKVYPGGKKVLDNVWLSFYPGAKIGVIGVNGSGKSTLLKIMAGLDKDYNGEAWSAEGAKVGYLPQEPQLDPSKTVQENVLEALKETKSLVDRFNEVSNLMAEPDADFDALLTEQAELQEKIDAADAWDLERTVDIAMDALRCPPGDSSVDKLSGGEKRRVALCKLLLEKPDLLLLDEPTNHLDAESVAWLERHLEEYKGTVVLVTHDRYFLDNVTGWILELDRGQGIPYEGAYSAWLEQKQKRLEQE 260          
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: A0A5D6XY47_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY47_9STRA)

HSP 1 Score: 324 bits (831), Expect = 2.760e-104
Identity = 154/256 (60.16%), Postives = 200/256 (78.12%), Query Frame = 1
Query:   73 DYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840
            D+V  ++ VG  +PGG++LF   SL F  GAKIGVLG NGSGKS++LK++AG  ++ DGE W+K+GLR+ YL QEP LD + NV +NI  G+AE ++L+RRF+EVS +MG+P+AD DALLAE +ELQ +ID    W L H VD +MR LRVP  D+ V  LSGGE+RRVALCRLLLE PD++LLDEPTNHLDAESV WLE++L+ + GTV+SITHDRYFLDNVA W+LE+DRG    Y+GNY+ WL Q++ R +++
Sbjct:   50 DFVCHLRDVGVTIPGGKKLFERVSLGFLRGAKIGVLGANGSGKSSLLKVVAGVARDFDGERWVKDGLRIGYLEQEPRLDPSKNVYENIMDGLAESQALLRRFDEVSAAMGEPDADFDALLAESAELQDQIDHLGCWDLSHEVDKAMRALRVPARDADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEDFLQGYPGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTRWLQQRRNRFNMQ 305          
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: UPI001A96756E (energy-dependent translational throttle protein EttA n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A96756E)

HSP 1 Score: 322 bits (826), Expect = 6.980e-104
Identity = 158/260 (60.77%), Postives = 196/260 (75.38%), Query Frame = 1
Query:   61 MESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840
            M S  YV  MK + K  PGG+++  N  LSF  G KIGVLG NG+GKST++KI+AG DK+  GE W  EG +V YL QEP LD + NV +N+   +AE + L+ RF EVS  M DP+AD DAL+AEQ++LQ +I+ ADAW +   V+I+M  LR PPGD+ V++LSGGEKRRVALC+LLLE PD++LLDEPTNHLDAESV WLE +L+ +KGTV+ +THDRYFLDNV  WILE+DRG  IPY+GNYS WL QKQ RLD E
Sbjct:    1 MASYQYVYVMKGLTKVYPGGKKVLDNIYLSFLPGVKIGVLGANGAGKSTLMKIMAGMDKDFSGEAWSAEGAKVGYLPQEPQLDPSKNVHENVMEALAETKGLLDRFNEVSNMMADPDADFDALMAEQADLQEKIEAADAWDIDRTVEIAMDALRCPPGDADVSKLSGGEKRRVALCKLLLEKPDLLLLDEPTNHLDAESVAWLERHLQEYKGTVVLVTHDRYFLDNVTGWILELDRGSGIPYEGNYSSWLEQKQKRLDQE 260          
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: A0A6I7PC24_9PROT (Energy-dependent translational throttle protein EttA n=1 Tax=Geminicoccaceae bacterium TaxID=2448052 RepID=A0A6I7PC24_9PROT)

HSP 1 Score: 322 bits (824), Expect = 1.390e-103
Identity = 153/260 (58.85%), Postives = 203/260 (78.08%), Query Frame = 1
Query:   61 MESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840
            M +  Y+  M+ + K  PGG+++F N +L+F  GAKIGVLGVNG+GKSTVLKI+AG DK+ +GE W  +G+++ YLSQEP+LD + +VM N+  G+AE ++L+ RF EVS+   D +AD DAL+AEQ++LQ +ID  + W ++  V+++M  LR PPGD+ VA LSGGEKRRVALCRLLL  PD++LLDEPTNHLDAESV WLE +L+ +KGTV++ITHDRYFLDNVA WILE+DRG  IP++GNYS WL  K+ RL+ E
Sbjct:    1 MAAYQYIYVMRQLTKIFPGGKKIFENVTLAFLPGAKIGVLGVNGAGKSTVLKIMAGLDKDFNGEAWAADGVKIGYLSQEPELDPSKDVMGNVMEGVAETKALIDRFNEVSMHFADEDADFDALMAEQADLQEKIDAVNGWEIERTVEMAMDALRCPPGDAEVATLSGGEKRRVALCRLLLAQPDMLLLDEPTNHLDAESVAWLERFLQEYKGTVVAITHDRYFLDNVAGWILEIDRGRGIPFEGNYSAWLENKRKRLEQE 260          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQX9_9PHAE1.160e-13976.21ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FX01_ECTSI2.420e-13977.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAC8_9STRA3.580e-11364.09P-loop containing nucleoside triphosphate hydrolas... [more]
A0A8K1FE21_PYTOL5.960e-10762.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W7TRE6_9STRA6.290e-10757.45Abc transporter atp-binding protein n=2 Tax=Nannoc... [more]
A0A248JNM2_9PROT1.100e-10562.31Energy-dependent translational throttle protein Et... [more]
UPI0015D4E6C72.470e-10462.69energy-dependent translational throttle protein Et... [more]
A0A5D6XY47_9STRA2.760e-10460.16Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
UPI001A96756E6.980e-10460.77energy-dependent translational throttle protein Et... [more]
A0A6I7PC24_9PROT1.390e-10358.85Energy-dependent translational throttle protein Et... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1127contigC-tenellus_contig1127:142..6199 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FX01
Model size861
Max annot lvl2880.D7FX01|-
Hectar predicted targeting categoryother localisation
Exons6
Evalue3.97e-140
EggNOG OGsCOG0488@1|root,KOG0927@2759|Eukaryota
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-10_003770.1
DescriptionATPase activity
Cds size861
COG categoryT
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1127.1.1prot_C-tenellus_contig1127.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1127 142..6199 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789171.056336-CDS-C-tenellus_contig1127:141..2801680789171.056336-CDS-C-tenellus_contig1127:141..280Choristocarpus tenellus KU2346CDSC-tenellus_contig1127 142..280 -
1680789171.0717845-CDS-C-tenellus_contig1127:725..7941680789171.0717845-CDS-C-tenellus_contig1127:725..794Choristocarpus tenellus KU2346CDSC-tenellus_contig1127 726..794 -
1680789171.0831573-CDS-C-tenellus_contig1127:1682..18461680789171.0831573-CDS-C-tenellus_contig1127:1682..1846Choristocarpus tenellus KU2346CDSC-tenellus_contig1127 1683..1846 -
1680789171.0952802-CDS-C-tenellus_contig1127:2666..27981680789171.0952802-CDS-C-tenellus_contig1127:2666..2798Choristocarpus tenellus KU2346CDSC-tenellus_contig1127 2667..2798 -
1680789171.1103354-CDS-C-tenellus_contig1127:3280..34051680789171.1103354-CDS-C-tenellus_contig1127:3280..3405Choristocarpus tenellus KU2346CDSC-tenellus_contig1127 3281..3405 -
1680789171.127213-CDS-C-tenellus_contig1127:5967..61991680789171.127213-CDS-C-tenellus_contig1127:5967..6199Choristocarpus tenellus KU2346CDSC-tenellus_contig1127 5968..6199 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1127.1.1

>prot_C-tenellus_contig1127.1.1 ID=prot_C-tenellus_contig1127.1.1|Name=mRNA_C-tenellus_contig1127.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=287bp
KGGGGGRTGKGGGAKGGSSAMESQDYVMSMKSVGKQLPGGRELFGNASLS
FTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEP
DLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSEL
QSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLL
EMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASW
ILEVDRGVLIPYKGNYSEWLHQKQGRLDLEHTKQVSV
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mRNA from alignment at C-tenellus_contig1127:142..6199-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1127.1.1 ID=mRNA_C-tenellus_contig1127.1.1|Name=mRNA_C-tenellus_contig1127.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=6058bp|location=Sequence derived from alignment at C-tenellus_contig1127:142..6199- (Choristocarpus tenellus KU2346)
AAGGGTGGTGGAGGAGGAAGGACTGGAAAGGGAGGAGGGGCTAAGGGAGG TTCTTCTGCAATGGAGAGCCAGGACTATGTGATGAGCATGAAATCGGTGG GTAAGCAGCTTCCTGGGGGGAGGGAGCTCTTTGGTAACGCGAGCCTCAGC TTTACGCACGGGGCTAAGATCGGTGTTCTTGGGGTTAACGGCAGCGGCAA GAGTACTGTTCTAAAGATTCTCGCAGGTCAAGGTACGACAAATGTATCCT GCGGGGGCGGGATCGACTCAAGTTGGACATTGGAACATAATAATATCCCG CAGGATGATGCGGATTTGCTATTTGCCCCAACATTGCGCGACCCCAAATC GAAACGCTGGTTGGATTGATGCTCCATAGACAAGGACGCCTCTACTATTT TATACAAATGTGCCTGCTTCTGGGACGCCCACTTCATATATGAACGCTTT TTTTTTAGTCTACTGATGTTGAGTGGATCACGACTAAAACAAATGGGACC TTCAGTGTGGACTTGTATGTACATTTGCGGAGGGCTGCATGCCCACATAA TAGTCTCTTTTGTGGGTAGAGTAACCAGTGCATACATTTTCTTTTGAATT AATGCGGCGTTGGTCTCTTATGTACTCGATTCTTTTCACGGGAGGACATG GTTTGTTTTATCTCGGAGTGTGTAAGTGCTAGCAAGGTATAACGAACATT TTATGAAACAAGACAGTTAGTTGCCAGGAGTGCTGGTGTTGTCTAAAGAA GTCAAAATGTGTTGGATTCAATGGGGAAATGGTTCTTATTGTAAGCACAA CATTGTAGAGCACTGCAGCAACTTTTTTTTGCAGAACCGAGTGAAGCTAT AAAAACTGTACAAGGGTCAGTTTTGGGGGGTGAGGTGTTTTCGTTTTTTT TGTTTTTTTTGTTTTTTGTACGTTTTTCAGTCGCGCGATCATATGCACCC TTGGACGAAAAACGTGACAGCTGACTGGGTAGCTGGGTAGCAGTGGTTAT TATTGTGCCCTATATCGGACGATGGCAAGGTGAAGGATCTCTTCACTTTT TCATATTGAAAAATTGGCCCCGAATGGACCGTCGCCACCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCAACCATAAAATCAAAATTATCT ATTATTTTTTTTTTATTATATTATTAAAAAACAATAATTTTTTTTTTTTT TTTTATCAAAAAATCCCCCCCCACCGCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCAGAGTAATTTCATTGAAATTACAAAATACTCTTTTGTTATTT TCAGATCTCAAGTAACTACAGAGATAGAAGGAAAGGAGGTTGATATGACA ACACATACAGGTAGAAGGGGCTTGGGGTGGTATGACAAGAGTTGTAGATA CCCACCGCTCTGTGTCTAGAGATACCTACTAAATTCTTCACACAATTAGA GATACCTACTAATATCTTCACACAATTTCCGTTGTGTTCTATGTTTGTCT CCCTCCTCACGACATTGCAAACTGCCAGTGAGCATACAACATTAGCATCA TTGGTGGATGATAAATATATTGTTTGATTTCAGTGTTTGATAATCGAGCT TGAATCAAACTCAGAAAATCGAAACTCAATAGTACAAGCAATTGTTGGTA ATAAATTCGCGGTGGTTATGTCATTAGGTGGTTGGTTTAGTTTATTGCTC TCCTTCACACAAGTGCATTATTGGATGGCATTTTTGGTATATTGGAATAG ATAGCTGCAGAGTGAAGGCATTCAGCCAGCCGTGTAGGGACCCCTGCAAC AGACGATATGGTGGTTGTCTGAAGATTGAAGTGGTGCATATCATGGTTAT GTAAACAACACAATTGTTGAAGATGTCTTCTATGCTTTGTGCTGGCTACC TACGCAGTTTCAGCTGGGCTGTATTGCCTTACATAGTTTCTTCTGCCTAG CCAGACCTGCCAATGCCTAAATTTGCTTGGGTAGACCTCCGTTTAGCTAC CTAATATTTTCTACGTTCATTCATCCTCATCAAAAGAGGCCTATGCCGTG AGTGTTTACAGTTTATCGCAGCACTCGTTCCTGTACTTTTTTGTGGTATG GTCTCATGAGTGGTAGCCAGCCTGCATGACTTTGAAGCCTCCAAACTTGC AGGGGTCTGGGGAAGCGAGGCCTATAAACAGTGGTCTACATTTCAAGTAT TGCTATCAATATTGAATATTGATAGCAAGATTTTGATATTCGATTGCTAT ATTCGATATATTGAAGCATCAAAGGCCCCAAAAGATTGATATGACTGATG TTTAGATGTTTGATATTTTGATAATGATATATGACATGTTTGATATTTTT GATTACATGGAACGAGTCTGGGCAGTAATCACTACTGAAGAGCACTTGAT GTGTTCAAGTGCCTGGGCAGGCAGCAGGCACCTGGCAGTGAAATATGTGG GTAGAGGGGTTCGTGAGTCTGGTGCTCTGCTGCAGTGACCATCCCGCAAC CAACTCTTCTGGCTGTATCCTTTACTCCCGAGTTCTTGCTGGTGATACAG ACTAGGTTGCAAACTTGAGGTTTCCGCTGTGTAGTCGCAAAACCTTCTGT AGCCAGACCCTTTCCTACTTGATGTTTGTCTGTAATCCCCATCTCTCTTA TTGATCTTAACATTTTTGGGGGTGTCCTTTTAAGGTAAGCATGGGCTTAC ACCAATGCTGCAGTGTAGTGTGAGCCTCTTTAACCGGACCTATCAATATT ATTTCCTCGTCACACCTACCTCCCTCTCCCTTCCTTGGTATTAGACAAGG AACACGATGGAGAGGTATGGATAAAAGAAGGCCTCAGGGTCAAGTACCTG TCCCAGGAGCCAGACCTGGATCTCAATTTAAACGTTATGGATAACATCCG GATTGGTATTGCTGAGCAGGTGTGTCGGTAAATCTCTTCCTCACCATGCC TGTCCCTCCATTTCAAACATATCTCCTAGTTGTGCTTGGTCTTCTCAAAT CAGTAACATGATCATTCACAAGTAGTGCTCTAGTTGCAGGTGATCCTCTT GAGTCGTCGCTTTTGCTTTTGTATTGTGCTAACCCTGGTTCTCTCCGCTT CAGTAATGCAAAGTTCTTGTCCTTGTCACTTGCCTCCTCACCCTACCCCA CCTCCTTATATCATGGCTTGCCCTTTCTCTTGCTTTTGTGTTTGGTCGTC CACCTGCCCACCTGCACACCCCTACCATCCCCATCCTCTGTTGATGCATC CCTGAGGTTGAACTCCATATATTTTCTATCCAAACCTCACAATCCATTTC CTATTTCCTTGCATATGCTGGGTTTTGTGATCTGCCATTGTATCTGTATC TGGGGGGGCTTGATTATTACACTTCATCTGGTTGGGGTCACTGTTTGTCA GGAGAGTTTGGTGCGTAGGTTTGAGGAGGTGAGTGTATCCATGGGAGACC CTGAGGCAGACCTGGATGCCCTGTTAGCAGAGCAATCAGAGCTGCAGTCT CGCATCGATGAGGCTGATGCCTGGACCCTTCAGGTGACCAAATGACTCTT GATAAAAGCTTGGTGGGGGGGGGGAAGGGATGGTTTTGTGGAGGGCAGGG TTGCATTGTAAGTAGTAAGTATTTGTTGCCTTAGTCACGTGAGTATAGAC CACACAACTTGTCTTGCTAAGCAGAGCTGCATTGATGGTGATGCCTGTGA CTGTTGTGTCCCTTGATACCTGACACCTACCAAGGCTAGTACATGTAGGT ACTAGTACATGTAGGTACTAGTACAAATATGTCTTGTTGGTCTTCGATCT CAAGGCACCTAGTATGAATACTGGATGAGTGAGCACATGATGTGTAACTA CTGTACTTGTCGAACAATGCCCAGCCACAGAAGCCATAAATCCATAGTCC TCTAGACTTGCAGTGCATGCCCTCAAATGAATCGCGAAGTATATACTTTG TACAGCAATGATATTGCTGGTTTGAAGTAGTATCACCTCATGCTCTTTTA CTAAAGTAGTTACACTGTCAATACTGTGTGTAATACTGTAGAGTGTTGTA CTAGTACCTTGGACTGTATTGTACTAGTACCTTGGACTGTATTGTACTAG TACCTTGGACTGTATTGTACTAGTACCTTGGACTGTATTGTACTAGTACC TTGGACTGCGTTGTACTAGTACCTTGGACTGCGTTGTACTAGTACCTTGG ACTGTGTTGTACTAGTACCTTGGACTGTGTTGTACTAGTACCTTGGACTG CAAGTGGCCCTTATTTCCTTCTTGTATTCTTCTGTCATTTCGGTGTGTTT GCATCTACGGGTGGGCGTGTGCCTGTGTGAAAAATCGGGGTCTGATCCTC CAGCACCGTGTGGACATTTCAATGAGAAAGCTGCGCGTGCCCCCTGGTGA CTCCCCTGTGGCGCAACTTTCGGGAGGTGAGAAGCGCCGTGTGGCCTTAT GCCGCCTGCTGCTGGAGATGCCGGACATCGTCCTCCTAGATGAGCCAACC AATCATCTGGATGCAGAGTGAGTCTCAAGCAAGCTTCTGTTCGTTTCTTT TGTGCTTGTGGTTCAGGGTTAAGGGTCTTGGGGGGGGGATGATGAGTAGA TGGGTGAGGTTTAGAGGGGAGGAGGATAAGTGTGCGCCTTACTGTTGTTC CGAGGGTTGAGGTGTGTGTAGTGCGTGGTGTACCCATCTAAATGATTCAA GTTGTTACATGTGTGGGAGGGAGACATTACTTTTTGTGAGACTTGTCTAT GTTCCAACAGAAGCTGTGTGTTTATGTATGTATCTGAGAGGGAGAGAGTT AGAAGGCCTTTATCGAGCGGTAGAAGATTGCGGGCTTGTTGGTTGAGATG ATTAGGGTTACTACATCTGTACGCTCATCTGACACCATTTTTTGTGGGGC ATAGGTAAATGATTTGTAGTAGTGGTGATTTTACTGCCACTTCAGTGCAC TGACAAAATCTTGGCTATTAGGACGTTAGTAGGACAGACACTACTCCTCG ACTGTTGTTGGTGTTGTGCAACAAGGTGCTTTTTTGATCATGTTTCAAAC CTTGAGCAGAGGATACATTGATGAACTGATTCATTTTACCTTTCTTTCCT TCATGCTTTGCCCCTGAAAAGGATTACTTGCAATACCCTACTTAGCTCAC ATTTTGCCACAGGACTCTCTCACTGATAATGTAATGCTTTGACACATCCC TTGAGATACAGGCCTGTGTACCCATGCCCCTTACGGGATCCTAAGAGGTG ATCATCAGCAACGCCATCCAAGCATCCTAGAGAACTAACTCAGTAGTGAT CAGTCCCGTCACACATATTGTTTCACAGAGGAATCTCTTTTCATGGAGGT CACCGTGTATGTACTCATCCCATAGATGTTTTCCTGTGTTTGTGCTGACT TACAGGTCTGTTCTTTGGCTGGAAGAGTATCTTCGATCCTTCAAGGGCAC TGTGATCAGCATCACGCACGACAGGTAATGGAAACCCCATAATAATCTCA GGCAAGAATCACTCGGTGTCTATCAATCACTACTGCTATGGGCTGTGTAT GTGAGAGAGGGTGTGTGTGAAATGGTTTGGATGACCTATACTACAGTTTC CACCTTTGTGAAATGACCCCATGTTGCCATAGGCATACTTGGAGTGAAGA TCATCTCCCCCAAATGCCTCCTGGAATAACCTGCCCCCCTCATACCCAAT ATCAATCTTCCCCCCTACTTCCATGATGTGACTTCACGCCTCAACCACCA CCCACTCCCATAACTCCCCTCCCCCCCCTCCTTCCCATTTATATTATTTA TATTATTTGTAAACACACACATACATATGCGCACACAGAGTCAGCTTTCA TTATTTTTTTAATCCCATGTCCCTTTCCAATTGAGATACACTTGTTCCCT CCCACAATATATAAAAAAGGTACTTTTTGGATAATGTAGCCTCCTGGATA TTGGAGGTAGACCGAGGTGTGCTAATCCCCTACAAGGGTAACTACTCAGA GTGGCTCCATCAAAAGCAGGGAAGGTTAGACTTGGAACACACCAAACAGG TGAGTGTT
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Coding sequence (CDS) from alignment at C-tenellus_contig1127:142..6199-

>mRNA_C-tenellus_contig1127.1.1 ID=mRNA_C-tenellus_contig1127.1.1|Name=mRNA_C-tenellus_contig1127.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=861bp|location=Sequence derived from alignment at C-tenellus_contig1127:142..6199- (Choristocarpus tenellus KU2346)
AAGGGTGGTGGAGGAGGAAGGACTGGAAAGGGAGGAGGGGCTAAGGGAGG
TTCTTCTGCAATGGAGAGCCAGGACTATGTGATGAGCATGAAATCGGTGG
GTAAGCAGCTTCCTGGGGGGAGGGAGCTCTTTGGTAACGCGAGCCTCAGC
TTTACGCACGGGGCTAAGATCGGTGTTCTTGGGGTTAACGGCAGCGGCAA
GAGTACTGTTCTAAAGATTCTCGCAGGTCAAGACAAGGAACACGATGGAG
AGGTATGGATAAAAGAAGGCCTCAGGGTCAAGTACCTGTCCCAGGAGCCA
GACCTGGATCTCAATTTAAACGTTATGGATAACATCCGGATTGGTATTGC
TGAGCAGGAGAGTTTGGTGCGTAGGTTTGAGGAGGTGAGTGTATCCATGG
GAGACCCTGAGGCAGACCTGGATGCCCTGTTAGCAGAGCAATCAGAGCTG
CAGTCTCGCATCGATGAGGCTGATGCCTGGACCCTTCAGCACCGTGTGGA
CATTTCAATGAGAAAGCTGCGCGTGCCCCCTGGTGACTCCCCTGTGGCGC
AACTTTCGGGAGGTGAGAAGCGCCGTGTGGCCTTATGCCGCCTGCTGCTG
GAGATGCCGGACATCGTCCTCCTAGATGAGCCAACCAATCATCTGGATGC
AGAGTCTGTTCTTTGGCTGGAAGAGTATCTTCGATCCTTCAAGGGCACTG
TGATCAGCATCACGCACGACAGGTACTTTTTGGATAATGTAGCCTCCTGG
ATATTGGAGGTAGACCGAGGTGTGCTAATCCCCTACAAGGGTAACTACTC
AGAGTGGCTCCATCAAAAGCAGGGAAGGTTAGACTTGGAACACACCAAAC
AGGTGAGTGTT
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