prot_C-tenellus_contig11212.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig11212.1.1
Unique Nameprot_C-tenellus_contig11212.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length117
Homology
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BLAST of mRNA_C-tenellus_contig11212.1.1 vs. uniprot
Match: A0A6H5L6J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J2_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 2.360e-48
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 0 
Query:    1 LVEAVQSVLGGPGEEGGLGEGFVEACLSCLGWSPQAVVEAFIEGRLPPQVASLERGLRRAWKGKKGDLDKAYRVDKELAAKEGQRQLALEREAEMDAWILSREYDDDYDDQVGR 114
            +V++VQ+VLGG GE GGLGEGFVEACLS LGWSPQ V+EA +E RLPPQVA+L RGLRRAWKGKKGDLDKAYRVDK+LAA E +R +A+E+  E DA++LSREYDDDYDDQ  R
Sbjct:  346 MVKSVQAVLGGTGEPGGLGEGFVEACLSVLGWSPQGVIEAVLEDRLPPQVANLNRGLRRAWKGKKGDLDKAYRVDKDLAAAEAKRLIAMEKRQEDDAYLLSREYDDDYDDQAWR 459
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BLAST of mRNA_C-tenellus_contig11212.1.1 vs. uniprot
Match: A0A7S2AVJ1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AVJ1_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.220e-12
Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 0 
Query:   17 GLGEGFVEACLSCLGWSPQAVVEAFIEGRLPPQVASLERGLRRAWKGKKG--DLDKAYRVDKEL----AAKEGQRQLA--LEREAEMDAWILSREYDDDYDDQ 111
            GLG GFVEA L    +S   VV A ++  LPPQ+  ++R L R    +K   D+D  Y V  +       +E QRQL   ++R+ E +AW+LSREYDDD+DDQ
Sbjct:    1 GLGAGFVEAMLVFHDFSVARVVAAVLDDNLPPQLEGMDRKLGRYRVSRKDLKDIDAGYSVGSQARDDDVLREKQRQLIRNMDRDEEDNAWVLSREYDDDFDDQ 103
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BLAST of mRNA_C-tenellus_contig11212.1.1 vs. uniprot
Match: A0A836CBT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT6_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 9.400e-7
Identity = 24/35 (68.57%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:    1 LVEAVQSVLGGPGEEGGLGEGFVEACLSCLGWSPQ 35
            ++  VQ V GGP +EGG+GEGFVEACLS +GWSPQ
Sbjct:  737 MIAEVQEVFGGPEQEGGVGEGFVEACLSLMGWSPQ 771
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11212.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L6J2_9PHAE2.360e-4874.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2AVJ1_9STRA3.220e-1243.69Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836CBT6_9STRA9.400e-768.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 18..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11212contigC-tenellus_contig11212:234..2179 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11212.1.1mRNA_C-tenellus_contig11212.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig11212 234..2179 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig11212.1.1 ID=prot_C-tenellus_contig11212.1.1|Name=mRNA_C-tenellus_contig11212.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=117bp
LVEAVQSVLGGPGEEGGLGEGFVEACLSCLGWSPQAVVEAFIEGRLPPQV
ASLERGLRRAWKGKKGDLDKAYRVDKELAAKEGQRQLALEREAEMDAWIL
SREYDDDYDDQVGRRNM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf