mRNA_C-tenellus_contig11193.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11193.3.1 vs. uniprot
Match: D7FYC0_ECTSI (GTPBP2, EF1alpha-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC0_ECTSI) HSP 1 Score: 169 bits (428), Expect = 6.390e-44 Identity = 126/279 (45.16%), Postives = 148/279 (53.05%), Query Frame = 1 Query: 1 VPVFVVSSVTAKGLSHLRVFLGGLTTPEPLATKYREARSKAAEVRISDTFLVEGVEGEVYAGTVVSGVVSVGDRLLLGPSGSLGSFVSTTVASVHVSRTAVRSASAGQTASFSLIFEETRELRGASGREVGDGESKTTKGGKKIQEEEGSGGSGCACCWVGDDVRCSLHVDGAEGEGENGGGEEKGRGGCHYVPQRGLGLAAD-SLRDGGGCGGTFLAEDLSPTARRGRGVGKCSNASGSSEGGSPSSRMRKGMVLVEASSRPCTTFEFDAEVMVLHHP 834 VPV VSSVT+ G++ LR FLG L+ PEPL Y+EAR KAAEVRIS+TF+VEGV GEVYAG VVSG VSVGDRLLLGP+G G+FV T VASVHV+R AVR ASAGQTASF+L+ + + G KGR + G+G+ A R GGGCGG + A G G E SP R RKGMVLVEA+ P T++EF+AEVMVLHHP Sbjct: 630 VPVMQVSSVTSDGIADLRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVEGV-GEVYAGNVVSGTVSVGDRLLLGPTGPRGAFVRTAVASVHVARLAVRRASAGQTASFTLVTDPDTDSDGDEXXXXXXXXXVAVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGR---EKAVEAGVGVVASIPARIGGGCGGAGMMASGGTPAPLVDGGGGXXXXXXVGEAESPR-RTRKGMVLVEATGLPNTSYEFEAEVMVLHHP 903
BLAST of mRNA_C-tenellus_contig11193.3.1 vs. uniprot
Match: A0A6H5KZE4_9PHAE (Tr-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE4_9PHAE) HSP 1 Score: 129 bits (324), Expect = 5.180e-30 Identity = 70/98 (71.43%), Postives = 81/98 (82.65%), Query Frame = 1 Query: 1 VPVFVVSSVTAKGLSHLRVFLGGLTTPEPLATKYREARSKAAEVRISDTFLVEGVEGEVYAGTVVSGVVSVGDRLLLGPSGSLGSFVSTTVASVHVSR 294 VPV VSSVT+ G++ LR FLG L+ PEPL Y+EAR KAAEVRIS+TF+V+GV GEVYAG VVSG VSVGDRLLLGP+GS G+FV T VASVHV+R Sbjct: 762 VPVMQVSSVTSDGIAELRAFLGRLSPPEPLEAMYKEARGKAAEVRISNTFMVDGV-GEVYAGNVVSGTVSVGDRLLLGPTGSRGAFVRTAVASVHVAR 858
BLAST of mRNA_C-tenellus_contig11193.3.1 vs. uniprot
Match: U5H0L8_USTV1 (Tr-type G domain-containing protein n=2 Tax=Microbotryum TaxID=34416 RepID=U5H0L8_USTV1) HSP 1 Score: 77.0 bits (188), Expect = 3.520e-12 Identity = 53/122 (43.44%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 4 PVFVVSSVTAKGLSHLRVFLGGLTTPEPLATKYREARSKAAEVRISDTFLVEGVEGEVYAGTVVSGVVSVGDRLLLGPSGSLGSFVSTTVASVHVSRTAVRSASAGQTASFSLIFEETRELR 369 P+F+VS+VT +GL+ ++ FL P+A+K E ISD F V V G V +GT++SGVV+VGD +LLGP SLG FV+T V S+ R V A AGQ+ SF+L + ++R Sbjct: 498 PIFLVSNVTGQGLNLIKTFLN----VAPIASKAHFPLDADFEFSISDVFSVPFV-GAVTSGTIMSGVVNVGDTVLLGPD-SLGGFVTTAVKSIQRKRVNVNRAEAGQSVSFALKRIKRSQIR 613
BLAST of mRNA_C-tenellus_contig11193.3.1 vs. uniprot
Match: M5E6N7_MALS4 (Tr-type G domain-containing protein n=2 Tax=Malassezia sympodialis (strain ATCC 42132) TaxID=1230383 RepID=M5E6N7_MALS4) HSP 1 Score: 74.3 bits (181), Expect = 2.300e-11 Identity = 50/113 (44.25%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 4 PVFVVSSVTAKGLSHLRVFLGGLTTPEPLATKYREARSKAAEVRISDTFLVEGVEGEVYAGTVVSGVVSVGDRLLLGPSGSLGSFVSTTVASVHVSRTAVRSASAGQTASFSL 342 P+F VSSVT L L +F+ + + + +Y +SK E+ +SD F V V G V +G + SG+V VGD LLLGP G LG+F T+V S+H R V ASAGQ+ F+L Sbjct: 211 PIFQVSSVTGHHLDLLSLFMNLIPSSQ---ARYAPLQSKPVELPVSDVFNVPFV-GTVVSGVLTSGIVKVGDPLLLGPDG-LGNFTPTSVRSIHRRRVNVECASAGQSVCFAL 318
BLAST of mRNA_C-tenellus_contig11193.3.1 vs. uniprot
Match: A0A0L0SC68_ALLM3 (Tr-type G domain-containing protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SC68_ALLM3) HSP 1 Score: 73.2 bits (178), Expect = 6.980e-11 Identity = 53/122 (43.44%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 4 PVFVVSSVTAKGLSHLRVFLGGLTTPEPLATKYREARSKAAEVRISDTFLVEGVEGEVYAGTVVSGVVSVGDRLLLGPSGSLGSFVSTTVASVHVSRTAVRSASAGQTASFSLIFEETRELR 369 P+F+VS+V A GL +LR FL L P+ KY + E + +TF V GV G V +GT+ SG+V VGD LLLGP SLG F+ T V +H+ R V A AG + S +L + +LR Sbjct: 437 PIFLVSNVDATGLPYLRQFLNVL----PMMGKYDI--TSPTEYSVVETFSVPGV-GTVVSGTLTSGIVHVGDSLLLGPD-SLGHFMPTQVKGIHMKRVPVPVALAGHSCSLALKKVKRSQLR 550
BLAST of mRNA_C-tenellus_contig11193.3.1 vs. uniprot
Match: A0A7S1ETP2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETP2_9RHOD) HSP 1 Score: 72.8 bits (177), Expect = 7.460e-11 Identity = 51/114 (44.74%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 1 VPVFVVSSVTAKGLSHLRVFLGGLTTPEPLATKYREARSKAAEVRISDTFLVEGVEGEVYAGTVVSGVVSVGDRLLLGPSGSLGSFVSTTVASVHVSRTAVRSASAGQTASFSL 342 VP FV+S+VT +GL +LR FL + + + E +S+ AE I + F V GV G V AGT VSG VS G L LGP S G F V SVH RT V+ AG+ SF+ Sbjct: 361 VPFFVISNVTGEGLGYLRSFLNIIQPRKD----WTEFKSQPAEFSIDEIFTVPGV-GTVVAGTTVSGSVSAGQVLALGPDSS-GHFTKVQVKSVHYKRTPVKKVVAGEAGSFAF 468
BLAST of mRNA_C-tenellus_contig11193.3.1 vs. uniprot
Match: A0A507CEZ8_9FUNG (Tr-type G domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CEZ8_9FUNG) HSP 1 Score: 72.4 bits (176), Expect = 1.190e-10 Identity = 55/113 (48.67%), Postives = 69/113 (61.06%), Query Frame = 1 Query: 4 PVFVVSSVTAKGLSHLRVFLGGLTTPEPLATKYREARSKAAEVRISDTFLVEGVEGEVYAGTVVSGVVSVGDRLLLGPSGSLGSFVSTTVASVHVSRTAVRSASAGQTASFSL 342 P+F VS+VT +GL L++FL + P KY+ + + E ISD F V GV G V +GTV SG+V VGD LLLGP S G F T V S+ R V ASAGQ+ASF+L Sbjct: 380 PIFQVSNVTGEGLDLLKLFLN-ILQPNGRG-KYQ--KDQPTEYSISDLFSVPGV-GTVVSGTVNSGIVHVGDTLLLGPD-SAGHFQPTIVKSIQRKRVNVPCASAGQSASFAL 486
BLAST of mRNA_C-tenellus_contig11193.3.1 vs. uniprot
Match: A0A2H9TKB4_9FUNG (Gtp-binding protein 1 n=1 Tax=Paramicrosporidium saccamoebae TaxID=1246581 RepID=A0A2H9TKB4_9FUNG) HSP 1 Score: 72.0 bits (175), Expect = 1.470e-10 Identity = 51/113 (45.13%), Postives = 67/113 (59.29%), Query Frame = 1 Query: 4 PVFVVSSVTAKGLSHLRVFLGGLTTPEPLATKYREARSKAAEVRISDTFLVEGVEGEVYAGTVVSGVVSVGDRLLLGPSGSLGSFVSTTVASVHVSRTAVRSASAGQTASFSL 342 P+F VS+V+ +G+ HL+ FL L P KY A AE +I+DT++V GV G V AGT++SG VS+G L LGP SLG+F S + V R V AGQ AS +L Sbjct: 317 PIFQVSNVSGEGIDHLKNFLHLL----PQGVKYG-ATEAPAEFQITDTYVVPGV-GTVVAGTMISGTVSLGQTLYLGPD-SLGNFTSCQIKGVQRKRVTVPKVYAGQCASLAL 422
BLAST of mRNA_C-tenellus_contig11193.3.1 vs. uniprot
Match: A0A497KTY8_9ARCH (Elongation factor 1-alpha n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A497KTY8_9ARCH) HSP 1 Score: 71.6 bits (174), Expect = 1.960e-10 Identity = 53/123 (43.09%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 1 VPVFVVSSVTAKGLSHLRVFLGGLTTPEPLATKYREARSKAAEVRISDTFLVEGVEGEVYAGTVVSGVVSVGDRLLLGPSGSLGSFVSTTVASVHVSRTAVRSASAGQTASFSLIFEETRELR 369 VP+F VS+VT KGL LR FL L P T++ E +K + I D F V GV G V +G + G VS D +L+GP GSF + V S+H++RT V A AG A +L E ELR Sbjct: 309 VPIFTVSNVTGKGLDLLRTFLNLL----PQRTRWNEQVNKQLLMYIDDIFNVRGV-GPVISGLIKQGTVSENDYVLIGPFKD-GSFRNVRVKSIHINRTFVSRAVAGNDACLALSGVEFEELR 425
BLAST of mRNA_C-tenellus_contig11193.3.1 vs. uniprot
Match: A0A4P9W8N0_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W8N0_9FUNG) HSP 1 Score: 70.9 bits (172), Expect = 3.710e-10 Identity = 52/113 (46.02%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 4 PVFVVSSVTAKGLSHLRVFLGGLTTPEPLATKYREARSKAAEVRISDTFLVEGVEGEVYAGTVVSGVVSVGDRLLLGPSGSLGSFVSTTVASVHVSRTAVRSASAGQTASFSL 342 P+F VS+V+ +GL LR+FL + + KY + E I+DTF V GV G V +GT+ SG+V VGD LLLGP S G F T V S+ R +V ASAG +ASF+L Sbjct: 297 PIFQVSNVSGEGLDLLRLFLNVVHANG--SGKYDV--KQPVEYSITDTFSVPGV-GTVVSGTITSGIVHVGDSLLLGPD-STGHFTPTIVKSIQRKRVSVPCASAGHSASFAL 403 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11193.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11193.3.1 >prot_C-tenellus_contig11193.3.1 ID=prot_C-tenellus_contig11193.3.1|Name=mRNA_C-tenellus_contig11193.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=280bp VPVFVVSSVTAKGLSHLRVFLGGLTTPEPLATKYREARSKAAEVRISDTFback to top mRNA from alignment at C-tenellus_contig11193:2287..4879- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11193.3.1 ID=mRNA_C-tenellus_contig11193.3.1|Name=mRNA_C-tenellus_contig11193.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2593bp|location=Sequence derived from alignment at C-tenellus_contig11193:2287..4879- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11193:2287..4879- >mRNA_C-tenellus_contig11193.3.1 ID=mRNA_C-tenellus_contig11193.3.1|Name=mRNA_C-tenellus_contig11193.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=840bp|location=Sequence derived from alignment at C-tenellus_contig11193:2287..4879- (Choristocarpus tenellus KU2346)back to top |