mRNA_C-tenellus_contig10100.2.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10100.2.2 vs. uniprot
Match: D7FMQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMQ8_ECTSI) HSP 1 Score: 345 bits (884), Expect = 6.860e-116 Identity = 164/234 (70.09%), Postives = 191/234 (81.62%), Query Frame = 2 Query: 104 RPFTLAFLWGLGI----------------MSGTDDALFRAIENMQKGSKKPWGRFLDAGTGTHSLKWIHTLDTESFTAVTADARFAETTRKEARIGFDVKSPDEIVMGNWRDDGFLKGRTFNTILADYLIGAMDGFAPYYQDQVFDRLKRHLKPEGRLYLVGMQPLPDHPGGAAELVCEAARLRDACILLAGHRMYREYPLDWIVRQLERSGFAVTSAQKMPIIYTPRTVKRQV 757 R LAF W G M+ T+DALFR+IE MQK + KPWG+FLDAGTGTHSLKWI+TL+TE FTAVTAD +FAE TRKE IGF VK+PDEIV+GNWRD+ FL+GR F+T+LADYL+GA+DGFAPYYQDQVF+RLKRH+ P GR+YLVGMQPLPDHPGGAAELVCEAARLRD+CILLAGHR YREYPLDWI RQ+++SG VTSA+KMP++Y P TVKRQ+ Sbjct: 30 RAAKLAFFWSFGFGGFPQQKIRAAFPRLGMAATEDALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVTADPQFAENTRKE--IGFKVKTPDEIVVGNWRDEKFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMKKSGMVVTSAKKMPVLYAPHTVKRQL 261
BLAST of mRNA_C-tenellus_contig10100.2.2 vs. uniprot
Match: A0A835Z2H5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2H5_9STRA) HSP 1 Score: 256 bits (655), Expect = 3.780e-82 Identity = 116/205 (56.59%), Postives = 160/205 (78.05%), Query Frame = 2 Query: 155 DDALFRAIENMQKGSKKPWGRFLDAGTGTHSLKWIHTLDTESFTAVTADARFAETTRKEARIGFDVKSPDE----IVMGNWRDDGFLKGRTFNTILADYLIGAMDGFAPYYQDQVFDRLKRHLKPEGRLYLVGMQPLPDHPGGAAELVCEAARLRDACILLAGHRMYREYPLDWIVRQLERSGFAVTSAQKMPIIYTPRTVKRQV 757 DDALF+A+ +Q S KPWGRFLD+GTGTHSL+W+HTL T +TAVTADA+FA + E ++ ++ I++GNW+D+ F +G ++TILADYLIGA+DGF+PYYQD++FDRLKRHL P G L+++GMQP+PD A +V E ARLRDACILLAGHR YRE+PLDW+ R L+++GFAVT +++MPI+++ +++RQ+ Sbjct: 3 DDALFKAVTGLQTASGKPWGRFLDSGTGTHSLRWVHTLPTAGWTAVTADAQFAANMQAELQLTDAERAQASTAACIIVGNWQDESFQEGEIYDTILADYLIGAIDGFSPYYQDEIFDRLKRHLAPGGTLFIIGMQPVPDSAPHPANIVTEVARLRDACILLAGHRPYREFPLDWVERHLKKAGFAVTLSRRMPILHSEGSIRRQL 207
BLAST of mRNA_C-tenellus_contig10100.2.2 vs. uniprot
Match: A0A7R9U2U4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2U4_9STRA) HSP 1 Score: 242 bits (617), Expect = 1.590e-75 Identity = 113/200 (56.50%), Postives = 148/200 (74.00%), Query Frame = 2 Query: 158 DALFRAIENMQKGSKKPWGRFLDAGTGTHSLKWIHTLDTESFTAVTADARFAETTRKEARIGFDVKSPDEIVMGNWRDDGFLKGRTFNTILADYLIGAMDGFAPYYQDQVFDRLKRHLKPEGRLYLVGMQPLPDHPGGAAELVCEAARLRDACILLAGHRMYREYPLDWIVRQLERSGFAVTSAQKMPIIYTPRTVKRQV 757 DA+F +IE MQ +PWGRFLDAGTG HSL WI T++TE++TAVTA A +R R ++ D +V+GNW DD FL+G TF+ ILADYLIGAMDGF+PY QD +F+RL+RHL +G LY+VG++P+PD GAA+++CE R+RDA ILLAGHR YREYP++WI RQ RSGF V + K PI+Y+ ++ RQ+ Sbjct: 68 DAIFDSIERMQARIGRPWGRFLDAGTGRHSLHWISTIETEAWTAVTAAQEMAVQSRDSVRGA--MREQDRVVVGNWDDDTFLEGETFDVILADYLIGAMDGFSPYKQDLIFERLQRHLAEDGILYIVGLEPIPDSGAGAADVICEVRRMRDAMILLAGHRCYREYPIEWIYRQCRRSGFEVMESLKFPILYSRASITRQL 265
BLAST of mRNA_C-tenellus_contig10100.2.2 vs. uniprot
Match: A0A7S1Y0Y4_9STRA (Hypothetical protein n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Y4_9STRA) HSP 1 Score: 237 bits (605), Expect = 2.650e-73 Identity = 118/229 (51.53%), Postives = 159/229 (69.43%), Query Frame = 2 Query: 89 RRGSPRPFTLAFLW-GLGIMSGTD----DALFRAIENMQKGSKKPWGRFLDAGTGTHSLKWI-HTLDTESFTAVTADARFAETTRKEARIGFDVKSPDEIVMGNWRDDGFLKGRTFNTILADYLIGAMDGFAPYYQDQVFDRLKRHLKPEGRLYLVGMQPLPDHPGGAAELVCEAARLRDACILLAGHRMYREYPLDWIVRQLERSGFAVTSAQKMPIIYTPRTVKRQV 757 R +P F+L F + G G T DA+F IE MQ ++PWGRFLDAGTG+HSL+WI DT+S+TAVTA A+ +R + ++ D++V+GNW D+ FL+G ++ ILADYLIGAMDGF+PY QD +F+RLKRHL P+G +Y+VG++P+PD GAA+++CE RLRDA ILLAGHR YREYPL WI RQ R+GF V + PI+Y+ ++ RQ+ Sbjct: 71 RAATPVLFSLFFFFLGEGSAMATPAKKGDAIFDCIERMQMQQQRPWGRFLDAGTGSHSLQWIARNFDTDSWTAVTAAEEMAKQSRDSVKG--HMREQDKVVIGNWDDETFLEGEVYDVILADYLIGAMDGFSPYTQDLIFERLKRHLAPDGVIYIVGLEPIPDTAEGAADVICEVRRLRDAMILLAGHRCYREYPLTWIYRQCRRAGFEVLESTTFPILYSRASITRQL 297
BLAST of mRNA_C-tenellus_contig10100.2.2 vs. uniprot
Match: A0A7S1UJN4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJN4_9STRA) HSP 1 Score: 235 bits (600), Expect = 7.120e-73 Identity = 110/201 (54.73%), Postives = 148/201 (73.63%), Query Frame = 2 Query: 158 DALFRAIENMQKGSKKPWGRFLDAGTGTHSLKWI-HTLDTESFTAVTADARFAETTRKEARIGFDVKSPDEIVMGNWRDDGFLKGRTFNTILADYLIGAMDGFAPYYQDQVFDRLKRHLKPEGRLYLVGMQPLPDHPGGAAELVCEAARLRDACILLAGHRMYREYPLDWIVRQLERSGFAVTSAQKMPIIYTPRTVKRQV 757 DA+F IE MQ ++PWGRFLDAGTG+HSL+WI DT+S+TAVTA A+ +R + ++ D++V+GNW D+ FL+G ++ ILADYLIGAMDGF+PY QD +F+RLKRHL P+G +Y+VG++P+PD GAA+++CE RLRDA ILLAGHR YREYPL WI RQ R+GF V + PI+Y+ ++ RQ+ Sbjct: 73 DAIFDCIERMQMQQQRPWGRFLDAGTGSHSLQWIARNFDTDSWTAVTAAEEMAKQSRDSVKG--HMREQDKVVIGNWDDETFLEGEVYDVILADYLIGAMDGFSPYTQDLIFERLKRHLAPDGVIYIVGLEPIPDTAEGAADVICEVRRLRDAMILLAGHRCYREYPLTWIYRQCRRAGFEVLESTTFPILYSRASITRQL 271
BLAST of mRNA_C-tenellus_contig10100.2.2 vs. uniprot
Match: A0A7S1UJN8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJN8_9STRA) HSP 1 Score: 223 bits (567), Expect = 2.850e-68 Identity = 103/186 (55.38%), Postives = 139/186 (74.73%), Query Frame = 2 Query: 203 KPWGRFLDAGTGTHSLKWI-HTLDTESFTAVTADARFAETTRKEARIGFDVKSPDEIVMGNWRDDGFLKGRTFNTILADYLIGAMDGFAPYYQDQVFDRLKRHLKPEGRLYLVGMQPLPDHPGGAAELVCEAARLRDACILLAGHRMYREYPLDWIVRQLERSGFAVTSAQKMPIIYTPRTVKRQV 757 +PWGRFLDAGTG+HSL+WI DT+S+TAVTA A+ +R + ++ D++V+GNW D+ FL+G ++ ILADYLIGAMDGF+PY QD +F+RLKRHL P+G +Y+VG++P+PD GAA+++CE RLRDA ILLAGHR YREYPL WI RQ R+GF V + PI+Y+ ++ RQ+ Sbjct: 59 RPWGRFLDAGTGSHSLQWIARNFDTDSWTAVTAAEEMAKQSRDSVKG--HMREQDKVVIGNWDDETFLEGEVYDVILADYLIGAMDGFSPYTQDLIFERLKRHLAPDGVIYIVGLEPIPDTAEGAADVICEVRRLRDAMILLAGHRCYREYPLTWIYRQCRRAGFEVLESTTFPILYSRASITRQL 242
BLAST of mRNA_C-tenellus_contig10100.2.2 vs. uniprot
Match: A0A7S2XXT9_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXT9_9STRA) HSP 1 Score: 215 bits (548), Expect = 9.370e-66 Identity = 108/229 (47.16%), Postives = 151/229 (65.94%), Query Frame = 2 Query: 116 LAFLWGLGIMSGTDDALFRAIENMQKGSKKPWGRFLDAGTGTHSLKWIHT------LDT--------ESFTAVTADARFAETTRKEARIGFDVKSPDEIVMGNWRDDGFLKGRTFNTILADYLIGAMDGFAPYYQDQVFDRLKRHLKPEGRLYLVGMQPLPDHPGGAAE-LVCEAARLRDACILLAGHRMYREYPLDWIVRQLERSGFAVTSAQKMPIIYTPRTVKRQV 757 ++F++ L T F I MQ+ KPWG+FLDAGTG HS+KW+ + LD+ ES+ VTA A+ R++ ++ ++ D +V+GNW D LKG TF+T+LADYLIGAMDGF+PY QD + RLK+H+ P RLY++G++PLPD AE +VCE R+RDACILLAGHR YRE+PL+W R L SGF V ++K+PI+Y+ +++KRQ+ Sbjct: 4 VSFMFMLFSARRTLPTPFAEITRMQQECGKPWGKFLDAGTGLHSMKWVSSRGRSGGLDSNEDPVGGLESWCGVTASWEDAQKIRQDPQVSGVMQDSDSVVLGNWDDPDLLKGMTFDTVLADYLIGAMDGFSPYKQDLMLPRLKQHMAPGARLYIIGLEPLPDKSQNPAEDIVCEVRRVRDACILLAGHRCYREFPLEWTERHLTGSGFRVVESKKLPIMYSFQSIKRQI 232
BLAST of mRNA_C-tenellus_contig10100.2.2 vs. uniprot
Match: A0A7S3GT58_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT58_9STRA) HSP 1 Score: 212 bits (540), Expect = 8.280e-65 Identity = 98/207 (47.34%), Postives = 134/207 (64.73%), Query Frame = 2 Query: 140 IMSGTDDALFRAIENMQKGSKKPWGRFLDAGTGTHSLKWIHTLDTESFTAVTADARFAETTRKEARIGFDVKSPDEIVMGNWRDDGFLKGR-TFNTILADYLIGAMDGFAPYYQDQVFDRLKRHLKPEGRLYLVGMQPLPDHPGGAAELVCEAARLRDACILLAGHRMYREYPLDWIVRQLERSGFAVTSAQKMPIIYTPRTVKRQV 757 I D LF+ IE K WG+ LDAGTG HS+KWI L +TA+TAD KE+ + ++ D +++GNW D+ F +G TF+TILADYLIGA+DGF+PY QD++ +LKRHL PEGRLY++GM P+PD P ++ E R RDACILL GHR YRE+PLDW+ R L + F+VT ++ I+++ + RQ+ Sbjct: 2 IQRNMGDILFKTIEKFH--GTKAWGKILDAGTGVHSIKWIQGLTNSGWTAITADTGMRNQMMKESGVAAQMRPQDSVIVGNWMDEAFCEGLGTFDTILADYLIGAVDGFSPYQQDEILVKLKRHLTPEGRLYIIGMNPIPDEPAPPGNIISEIRRARDACILLGGHRPYREFPLDWMRRHLTSAQFSVTGSKNFTILHSEDSAVRQI 206
BLAST of mRNA_C-tenellus_contig10100.2.2 vs. uniprot
Match: A0A2E7UX52_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7UX52_9DELT) HSP 1 Score: 208 bits (530), Expect = 1.250e-63 Identity = 106/207 (51.21%), Postives = 145/207 (70.05%), Query Frame = 2 Query: 152 TDDALFRAIENMQKGSKKPWGRFLDAGTGTHSLKWIHTLDTESFTAVTADARFAETTRKEARIGFD-VKSPDEIVMGNWRDDGFLKGRTFNTILADYLIGAMDGFAPYYQDQVFDRLKRHLKPE-GRLYLVGMQPLPDH---PGGAAELVCEAARLRDACILLAGHRMYREYPLDWIVRQLERSGFAVTSAQKMPIIYTPRTVKRQV 757 T+DALF +E ++ WGR LDAGTG HSL+WI +L+T +TAVT + E R+G D +++ D IV GNW D+ L+G F+ +LADYL+GA+DGFAPY+Q ++F+RL+ H++ E GRLY+VG++P PD PGG +LV E ARLRDACILLAGHR YREYP +W+ R L ++GF V S++ +PI+Y R V Q+ Sbjct: 6 TEDALFSTLERFH--GERSWGRVLDAGTGMHSLQWIRSLETAGWTAVTGAVSRQQDL--ERRLGADGMRATDRIVTGNWTDEALLRGEVFDVVLADYLLGAIDGFAPYFQTRLFERLRSHVRRESGRLYVVGLEPYPDRAADPGG--QLVLEIARLRDACILLAGHRCYREYPREWVHRTLAQAGFEVDSSEAIPIVYRRRFVDGQL 206
BLAST of mRNA_C-tenellus_contig10100.2.2 vs. uniprot
Match: A0A2E5HIC5_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E5HIC5_9DELT) HSP 1 Score: 206 bits (524), Expect = 7.170e-63 Identity = 110/203 (54.19%), Postives = 135/203 (66.50%), Query Frame = 2 Query: 158 DALFRAIENMQKGSKKPWGRFLDAGTGTHSLKWIHTLDTESFTAVTADARFAETTRKEARIGFDVKSPDEIVMGNWRDDGFLKGRTFNTILADYLIGAMDGFAPYYQDQVFDRLKRHLKPEGRLYLVGMQPLPDH---PGGAAELVCEAARLRDACILLAGHRMYREYPLDWIVRQLERSGFAVTSAQKMPIIYTPRTVKRQV 757 D LF +E Q WG LDAGTG HSL WI L TE +TAVT DAR R E R ++ D +V+GNWRD L ++ +LADYLIGA+DGFAPY+QDQ+ RL+ ++ GRLY++G++P PD PGGA L+ E ARLRDACILLAGHR YREYP+DWIVRQL SGF V A K+PI+Y R +K Q+ Sbjct: 3 DQLFAQLEAWQ--GDDDWGSVLDAGTGDHSLSWILGLPTERWTAVTGDAR--RKARLEERYADRMRPEDRVVVGNWRDPVMLHDERYDVVLADYLIGAIDGFAPYFQDQLMARLRPLVR--GRLYIIGLEPYPDRAHSPGGA--LILEVARLRDACILLAGHRCYREYPMDWIVRQLGLSGFMVDDAMKIPILYGERFIKGQL 197 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10100.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10100.2.2 >prot_C-tenellus_contig10100.2.2 ID=prot_C-tenellus_contig10100.2.2|Name=mRNA_C-tenellus_contig10100.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=234bp MYSFPCSEEARRRGSPRPFTLAFLWGLGIMSGTDDALFRAIENMQKGSKKback to top mRNA from alignment at C-tenellus_contig10100:1498..5562+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10100.2.2 ID=mRNA_C-tenellus_contig10100.2.2|Name=mRNA_C-tenellus_contig10100.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4065bp|location=Sequence derived from alignment at C-tenellus_contig10100:1498..5562+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10100:1498..5562+ >mRNA_C-tenellus_contig10100.2.2 ID=mRNA_C-tenellus_contig10100.2.2|Name=mRNA_C-tenellus_contig10100.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=702bp|location=Sequence derived from alignment at C-tenellus_contig10100:1498..5562+ (Choristocarpus tenellus KU2346)back to top |