mRNA_C-tenellus_contig11047.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: D8LJZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ6_ECTSI) HSP 1 Score: 264 bits (674), Expect = 6.460e-79 Identity = 137/263 (52.09%), Postives = 175/263 (66.54%), Query Frame = 1 Query: 31 SQTPGVRRSGRQRMPPLKWWKGDHVVYEAEKEGVLAVAGIVKGQPTPVQS---RKRGRTGVGAIGGGLGGSKRGR--------LEPLSPSKLTALPQGS---YLRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKAGSAAQAFSVPAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLKV 777 S TPGVRRSGRQR+ PLK+W+GD++ Y +++G+ GIVKG P S RKRG G KR R + PLSPSK++ + + + K++ C+VWDE+TA RQVVM S NLV + + T R PGK+K G AAQAF V E IS WL+G L+LPP A+KD+EHVA STQIY V + QP+ALE+A+AMP + + FD TAQRFLLSPGDHFY+PVNN+YRLENHS A A+IYWT++K+ Sbjct: 559 SHTPGVRRSGRQRVAPLKFWRGDNIQYGVDEKGLQVAEGIVKGPALPEPSSPSRKRGSEG----------KKRRRPPAVKDEHMSPLSPSKVSEMRKSKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRAPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDRAKAVIYWTIIKI 811
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: A0A6H5KZX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZX0_9PHAE) HSP 1 Score: 263 bits (672), Expect = 2.790e-78 Identity = 136/254 (53.54%), Postives = 173/254 (68.11%), Query Frame = 1 Query: 31 SQTPGVRRSGRQRMPPLKWWKGDHVVYEAEKEGVLAVAGIVKGQPTPVQS---RKRGRTGVGAIGGGLGGSKRGRLEPLSPSKLTALPQGS---YLRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKAGSAAQAFSVPAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774 S TPGVRRSGRQR+ PLK+W+GD++ Y +++G+ GIVKG P S RKRG G G K + PLSPSK++ + + + K++ C+VWDE+TA RQVVM S NLV + + T R PGK+K G AAQAF V E IS WL+G L+LPP A+KD+EHVA STQIY V + QP+ALE+A+AMP + + FD TAQRFLLSPGDHFY+PVNN+YRLENHS A A+IYWT++K Sbjct: 657 SHTPGVRRSGRQRVAPLKFWRGDNIQYGVDEKGLQVAEGIVKGPALPEPSSTSRKRG--GEGKKRRRPPAVKDEHMSPLSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRAPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDRAKAVIYWTIIK 908
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: A0A7S2FXX0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXX0_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.870e-46 Identity = 91/256 (35.55%), Postives = 147/256 (57.42%), Query Frame = 1 Query: 31 SQTPGVRRSGRQRMPPLKWWKGDHVVYEAEKEGV----LAVAGIVKGQPTPVQSRKRGRTGVGAIGGGLGGSKRGRLEPLSPSKLTALPQGSYLRKEEACVVWDEDTAEHVKRQVVMRSDNL--VQNQLEPTGHRVPGK-DKAGSAAQAFSV-PAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774 S + G RRS RQR P L++W+ + ++YE ++G+ VAGI + TP ++ R K + P +++ LP+ + + VW+E A+ K +++ RS + + +L T R PG+ D G AAQ F + P + I GW+SG + LPP A+KDAE V +Q+++V +CQP + E+A+AMP ++ F+P +AQR+LLSPGD F++ N+YRL+NHS + D ++WT++K Sbjct: 3 SDSSGARRSKRQRYPVLEYWRNERMIYERPEDGLGEVLPMVAGISERSKTPAAPTRKKRP-----------RKDISMSQPVPIQVSDLPEQYEFKDSDKGRVWNEKEAKASKMKIICRSKAMKKTERELPITADRDPGEEDLVGVAAQGFLMNPMSSAIPGWISGYVTLPPRAIKDAEGVGYCSQVFFVAECQPGSFEVAIAMPQDQ--QIVFEPESAQRYLLSPGDQFFVAPGNVYRLQNHSKKVDCKLFWTIIK 245
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: A0A7S2SRM5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRM5_9STRA) HSP 1 Score: 168 bits (426), Expect = 8.750e-46 Identity = 103/263 (39.16%), Postives = 142/263 (53.99%), Query Frame = 1 Query: 7 LGIKKEKGSQTPGVRRSGRQRMPPLKWWKGDHVVYEAEK-----EGVLAVAGIVKGQPTPVQSRKRGRTGVGAIGGGLGGSKRGRLEPLSPSKLTALPQGSYLRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKD-KAGSAAQAFSVP-AEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774 +G+ + GS RRS R R PPL +WK + VYE E + VAG+ + TP + ++ R I RG P LPQG +K E VW E+ K V+ RS L + +L T R + + G+AAQAF V A D+ W+SG + LPP A+KD E V S+Q+++V DCQP +LE+A+ + ++ R FD +TAQRFLLS GD FYIP NIYRLENHS + D I+W +++ Sbjct: 204 VGVTPDDGS----ARRSRRVRYPPLAYWKNERYVYERRASEGLGEVLPTVAGVSERTKTPAAAARKKRPRPRKI-------DRGNALPSKD-----LPQGREFKKHEKAKVWSEEAQRQRKMTVIARSSQLEEGELPITAKRTKDESSRVGAAAQAFKVESAGPDLPTWISGHVVLPPHAIKDPERVGNSSQVFFVADCQPKSLEVAIGL--DQDRPTDFDRATAQRFLLSSGDQFYIPPFNIYRLENHSEDQDCKIFWAIIQ 448
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: A0A835YQ32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ32_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.320e-39 Identity = 78/166 (46.99%), Postives = 107/166 (64.46%), Query Frame = 1 Query: 298 LRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKAGS---AAQAFSV--PAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALA-MPDNEVRN-DFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774 +R EE+C+V+D D ++Q++ R+D+LV L H G+ + + AA+AFSV A +S W SG L LPP +K AE V TQ+YWV C+P +LELA+A +P+ R D FD +TAQR+LLSPGDHFY+P N+YRLENH+ +ADA I W +L Sbjct: 1 MRMEESCLVYDVDARGEEQKQIIFRNDSLVYQSL----HLADGQAENSAPCQAARAFSVRGAAACGLSSWSSGALTLPPRGLKAAERVDDHTQLYWVTSCRPYSLELAIAKIPEGSDRPADAFDDATAQRYLLSPGDHFYVPPRNVYRLENHAPDADAQICWAILN 162
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: B8BWA8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWA8_THAPS) HSP 1 Score: 155 bits (391), Expect = 2.730e-39 Identity = 100/272 (36.76%), Postives = 144/272 (52.94%), Query Frame = 1 Query: 34 QTPG---VRRSGRQRMPPLKWWKGDHVVYEAEKEGVL---------AVAGIVKGQPTPVQSRK------RGRTG----VGAIGGGLGGSKRGRLEPLSPSKLTALPQGSYLRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKA-GSAAQAFSVPAEAD--ISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774 +TPG +RRS R R PL++WK + ++YEA+ E L V+G+ K +PTP + RK + + G S G +P L + L E +W E + + +VV R DN ++L + R + K G A+QAF VP + D G++SG + LPP +KDAE V +Q++ VGDCQPN+LE ALA P N+ + F+ TAQR+LLS GD F IP N+YR+ENHS A ++WT++K Sbjct: 526 RTPGGTEIRRSHRARFKPLQFWKNEKLIYEAQNESGLLGEAMGDMPVVSGVHKAKPTPYKERKVTVKPKQEKNGKXXXXXXXXXXXXXSYDGGPNAKNPFDPKTLGKKYQLNNGEHGSIWSETLEDTTESKVVSRLDNRSFSKLPLSNTRKKKESKVVGFASQAFHVPTDQDDLFPGYISGNVVLPPRGIKDAEGVGLCSQVFNVGDCQPNSLEFALADPTNQ--DGEFNAKTAQRYLLSKGDMFQIPPGNVYRIENHSKTDKACLFWTIIK 795
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: A0A6S8DDY6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8DDY6_9STRA) HSP 1 Score: 152 bits (384), Expect = 2.880e-39 Identity = 95/267 (35.58%), Postives = 133/267 (49.81%), Query Frame = 1 Query: 1 MVLGIKKEKGSQTPGVRRSGRQRMPPLKWWKGDHVVYEAEKEGVLAVAGIVK-GQPTPVQSRKRGRTGVGAIGGGLGGSKRGRLEPLSPSKLTALPQGSYLRKEEA--CVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKAGSAAQAFS-----VPAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPD-NEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774 M + KK+ + GVRRS RQ+ PP++WWK + V+Y + E A V+ +PTP +K ++ +K T + Y EE +WDE VV R L +L T R P SAAQA S + A ++ WLSG L +PP A+KD E V +Q+++V CQP ALELA+A P + R F+P A RFLL+PGD F+IP NN+YR+EN S A I+W +++ Sbjct: 183 MPISEKKKANQEDRGVRRSRRQKFPPMQWWKNERVIYTLDTEIEAPTATAVELAEPTPRPIKKX-------------------XXAINNNKDTII-SSEYFADEEGGQAQIWDELRRRSEMTIVVSRESELQTTKLPGTSSRRPDNAPLASAAQALSNEAYELDANLCLAAWLSGQLIMPPRAIKDEESVGLCSQVFFVASCQPGALELAIASPSIDSNRPPNFEPDQAVRFLLAPGDQFHIPPNNMYRIENRSTTQLAKIFWCIMR 429
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: A0A7S2R7M7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R7M7_9STRA) HSP 1 Score: 135 bits (339), Expect = 5.700e-36 Identity = 68/158 (43.04%), Postives = 100/158 (63.29%), Query Frame = 1 Query: 310 EACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGK-DKAGSAAQAFSVPAEAD--ISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774 E +WDE E V+ ++ S+N++ + L + R + DK G AAQ+F++ A D + GW++G L+LPP ++KDAE V Q++ VG CQP ALE+A+A P E F ++QRFLLS GD F+IP NIYRLENHS + L++WT+++ Sbjct: 9 EVAYIWDEAEGEIVEDKIFCYSENMIGSDLPLSAKRSKREGDKVGMAAQSFNIAASTDNVLPGWIAGNLRLPPKSIKDAEGVGLCAQVFNVGQCQPKALEVAIADP--EENGGKFSDKSSQRFLLSTGDMFHIPPGNIYRLENHSSSEECLLFWTIVR 164
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: K0TMS8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TMS8_THAOC) HSP 1 Score: 139 bits (349), Expect = 6.440e-34 Identity = 96/275 (34.91%), Postives = 139/275 (50.55%), Query Frame = 1 Query: 37 TPG---VRRSGRQRMPPLKWWKGDHVVYEAEKE-GVLA--------VAGIVKGQPTPVQSRKR-------------GRTGVGAIGGGLGGSKRGRLEPL-SPSKLTALPQGSYLRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKA-GSAAQAFSVPAEAD--ISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774 TPG +RRS R R PL +WK + +VY+ ++E G+L VAG++ PTP + RK EP P +L + +R E+ VW E + +VV R D ++L R + K G A+QAF V + D G+++G + +PP +KDAE V +Q++ VGDCQPN++E ALA P+ + + FDP TAQR+LLS GD F IP N+YR+ENHS A ++WT++K Sbjct: 322 TPGGSRLRRSRRARFKPLDFWKNEKLVYKPQREPGLLGEAMGDMPVVAGVMHALPTPYRERKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSREPFDDKSLRKKYKIRTGESGHVWSETLENTLPAKVVSRLDGRSFSKLPLCSDRKKRESKVVGFASQAFHVQTDDDDLFPGYIAGNVVMPPRGIKDAEGVGLCSQVFNVGDCQPNSVEFALADPNGQ--DGEFDPRTAQRYLLSKGDMFQIPPGNVYRIENHSKTDRATLFWTIVK 594
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: K3WQF2_GLOUD (CENP-C_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQF2_GLOUD) HSP 1 Score: 138 bits (348), Expect = 1.010e-33 Identity = 84/253 (33.20%), Postives = 132/253 (52.17%), Query Frame = 1 Query: 43 GVRRSGRQRMPPLKWWKGDHVVYEAEKEGV----LAVAGIVK-GQPTPVQSRKRGRTGVGAIGGGLGGSKRGRLEP----LSPSKLTALPQGSYLRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKAGSAAQAFSVPAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774 GVRRS R+R PL W+KG+H VYE + GV VAGI + G TP ++ ++ +K+ P + P ++LP+G E ++D K V+ R+ + +L VPG A Q+F++ S W+ G L LPP A K+AE V + Q+++V +CQP A+E++ V +++FD + A RFLL+PGD FY+P N Y L+N+S +A +++T++K Sbjct: 372 GVRRSKRKRFKPLAWYKGEHYVYERRESGVGLVIPTVAGIERVGTTTPTKTARKY-------------TKKSHSNPQRKAIKPFPKSSLPKGLKYEDGEWADLYDTSAGCINKMNVICRASEIEHRELPSVDGEVPG-----FAGQSFNLRNSHPFSRWICGRLGLPPGAAKEAESVGEAVQVFYVTNCQPGAVEVSFG----PVTDEYFDTTKATRFLLNPGDEFYVPSRNAYYLKNYSEKATCDLHFTIMK 602 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11047.2.1 >prot_C-tenellus_contig11047.2.1 ID=prot_C-tenellus_contig11047.2.1|Name=mRNA_C-tenellus_contig11047.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=261bp MVLGIKKEKGSQTPGVRRSGRQRMPPLKWWKGDHVVYEAEKEGVLAVAGIback to top mRNA from alignment at C-tenellus_contig11047:2055..4952+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11047.2.1 ID=mRNA_C-tenellus_contig11047.2.1|Name=mRNA_C-tenellus_contig11047.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2898bp|location=Sequence derived from alignment at C-tenellus_contig11047:2055..4952+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11047:2055..4952+ >mRNA_C-tenellus_contig11047.2.1 ID=mRNA_C-tenellus_contig11047.2.1|Name=mRNA_C-tenellus_contig11047.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=783bp|location=Sequence derived from alignment at C-tenellus_contig11047:2055..4952+ (Choristocarpus tenellus KU2346)back to top |