prot_C-tenellus_contig11044.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig11044.1.1
Unique Nameprot_C-tenellus_contig11044.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length54
Homology
BLAST of mRNA_C-tenellus_contig11044.1.1 vs. uniprot
Match: D7FS79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS79_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 1.290e-18
Identity = 35/54 (64.81%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 KVPLGDILDVERSGSVVWLKCLHLGTVGFEANLPGDSEIFYYAMDALLDLRCSL 54
            ++PL D+LDVER G VVW+KCLHLGT+GFEA+L  D+ +FY AMD+LLD RC +
Sbjct:  160 QIPLRDVLDVERRGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGV 213          
BLAST of mRNA_C-tenellus_contig11044.1.1 vs. uniprot
Match: A0A6H5K6H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H5_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 9.200e-18
Identity = 35/54 (64.81%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 KVPLGDILDVERSGSVVWLKCLHLGTVGFEANLPGDSEIFYYAMDALLDLRCSL 54
            ++PL D+LDVER G VVW+KCLHLGT+GFEA+L  D+ +FY AMD+LLD RC +
Sbjct:  385 QIPLRDVLDVERRGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGV 438          
BLAST of mRNA_C-tenellus_contig11044.1.1 vs. uniprot
Match: A0A835ZK67_9STRA (SKA2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK67_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.640e-12
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    2 VPLGDILDVERSGSVVWLKCLHLGTVGFEANLPGDSEIFYYAMDALLDLR 51
            VPL D+LDVER GS+VW+K LH+G  G E  L  D+E+ Y AMDALLD R
Sbjct:  382 VPLSDVLDVEREGSIVWVKTLHMGEFGLEMPLQEDAELVYLAMDALLDER 431          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11044.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FS79_ECTSI1.290e-1864.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6H5_9PHAE9.200e-1864.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZK67_9STRA2.640e-1262.00SKA2 domain-containing protein n=1 Tax=Tribonema m... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11044contigC-tenellus_contig11044:35..196 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11044.1.1mRNA_C-tenellus_contig11044.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig11044 35..196 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig11044.1.1 ID=prot_C-tenellus_contig11044.1.1|Name=mRNA_C-tenellus_contig11044.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=54bp
KVPLGDILDVERSGSVVWLKCLHLGTVGFEANLPGDSEIFYYAMDALLDL
RCSL
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