mRNA_C-tenellus_contig11033.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig11033.1.1
Unique NamemRNA_C-tenellus_contig11033.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig11033.1.1 vs. uniprot
Match: D8LBY7_ECTSI (Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBY7_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 2.230e-145
Identity = 219/242 (90.50%), Postives = 233/242 (96.28%), Query Frame = 1 
Query:    1 SGGVFEVKSTNGDTMLGGEDFDEALLKHLLSEFRKESGLDLSGDRLAMQRLREAAEKAKRELDGMPQTDVSLPFITADATGPKHMNLKISRSSFENLVDGLIERAIQPCKNCIRDAGLETKDVDEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIKALQGEREMSVDNKV 726
            SGGVFEVKSTNGDTMLGGEDFDE LLKHLLSEFRKESG+DLSGD LAMQRLREAAEKAKRELDGMPQTDVSLPFITAD++GPKHMN+K++R+ FENLVDGLIERAI+PCK+C+RDAGLET +V EVLLVGGMTRMPKVQ+KVEAFFGKPPSRGVNPDEVVAMGAAIQGGVLRG VKDILLLDVTPLSLGIETLGGV TKLINRNTTIPTKKVQ FSTAADNQSQVQIKALQGEREM+ DNK+
Sbjct:  252 SGGVFEVKSTNGDTMLGGEDFDEVLLKHLLSEFRKESGIDLSGDTLAMQRLREAAEKAKRELDGMPQTDVSLPFITADSSGPKHMNVKVTRAEFENLVDGLIERAIKPCKDCMRDAGLETDEVHEVLLVGGMTRMPKVQSKVEAFFGKPPSRGVNPDEVVAMGAAIQGGVLRGSVKDILLLDVTPLSLGIETLGGVMTKLINRNTTIPTKKVQTFSTAADNQSQVQIKALQGEREMATDNKM 493
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BLAST of mRNA_C-tenellus_contig11033.1.1 vs. uniprot
Match: A0A836C7W0_9STRA (Heat shock protein 70 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7W0_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 2.520e-139
Identity = 208/241 (86.31%), Postives = 228/241 (94.61%), Query Frame = 1 
Query:    1 SGGVFEVKSTNGDTMLGGEDFDEALLKHLLSEFRKESGLDLSGDRLAMQRLREAAEKAKRELDGMPQTDVSLPFITADATGPKHMNLKISRSSFENLVDGLIERAIQPCKNCIRDAGLETKDVDEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIKALQGEREMSVDNK 723
            SGGVFEVKSTNGDT+LGGEDFDEALLK+L+  FRKESG++L+GDRLAMQRLREAAEKAKRELDG+P TDVSLPFITAD++GPKHMN+K++R++FENLVD LIERAI PCKNC+RDA L+  D+ EVLLVGGMTRMPKVQ +V+AFFGK PSRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIK LQGEREM+ DNK
Sbjct:  191 SGGVFEVKSTNGDTLLGGEDFDEALLKYLVDTFRKESGINLAGDRLAMQRLREAAEKAKRELDGLPMTDVSLPFITADSSGPKHMNIKVTRATFENLVDDLIERAITPCKNCMRDASLDKSDIHEVLLVGGMTRMPKVQERVQAFFGKQPSRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIKVLQGEREMAADNK 431
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BLAST of mRNA_C-tenellus_contig11033.1.1 vs. uniprot
Match: A0A7S2V2X3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2X3_9STRA)

HSP 1 Score: 405 bits (1040), Expect = 1.760e-138
Identity = 202/242 (83.47%), Postives = 224/242 (92.56%), Query Frame = 1 
Query:    1 SGGVFEVKSTNGDTMLGGEDFDEALLKHLLSEFRKESGLDLSGDRLAMQRLREAAEKAKRELDGMPQTDVSLPFITADATGPKHMNLKISRSSFENLVDGLIERAIQPCKNCIRDAGLETKDVDEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIKALQGEREMSVDNKV 726
            SGGVFEVKSTNGDT+LGGEDFDE LLKHL+ EFRKESG+DLS D LAMQR+REAAEKAKRELDG+PQTDVSLPFITAD TGPKHMN+KI+R+ FENLVD LIER + PC+NC++DAG++ K+V E+LLVGGM+RMPKVQ KVE FFG+ PS+GVNPDEVVAMGAAIQGGVL+GDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKK QVFSTAADNQ QVQIK LQGEREM+ DNK+
Sbjct:  162 SGGVFEVKSTNGDTLLGGEDFDEHLLKHLIKEFRKESGIDLSNDPLAMQRVREAAEKAKRELDGLPQTDVSLPFITADQTGPKHMNVKITRAQFENLVDDLIERTMDPCRNCLKDAGIDKKEVSEILLVGGMSRMPKVQTKVEEFFGRKPSKGVNPDEVVAMGAAIQGGVLKGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKGQVFSTAADNQPQVQIKVLQGEREMAADNKL 403
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BLAST of mRNA_C-tenellus_contig11033.1.1 vs. uniprot
Match: W7U263_9STRA (Heat shock protein 70 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U263_9STRA)

HSP 1 Score: 400 bits (1029), Expect = 1.630e-133
Identity = 199/242 (82.23%), Postives = 225/242 (92.98%), Query Frame = 1 
Query:    1 SGGVFEVKSTNGDTMLGGEDFDEALLKHLLSEFRKESGLDLSGDRLAMQRLREAAEKAKRELDGMPQTDVSLPFITADATGPKHMNLKISRSSFENLVDGLIERAIQPCKNCIRDAGLETKDVDEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIKALQGEREMSVDNKV 726
            SGGVFEVK+TNGDTMLGGEDFDE LLKHL +EFRK+SG+DLS DRLAMQRLREAAEKAKRELDG+ QT+VSLPFITAD TGPKH+N+K+SR+ FE LVD L++R IQPCKNC++DA +E KD++EVLLVGGMTRMPKVQ+ VE FFG+ PS+GVNPDEVVAMGAAIQGGVLRGDVKD+LLLDVTPLSLGIETLGG+FT+LINRNTTIPTKK QVFSTAADNQSQVQIK LQGERE++ DNK+
Sbjct:  250 SGGVFEVKATNGDTMLGGEDFDEELLKHLAAEFRKDSGIDLSKDRLAMQRLREAAEKAKRELDGLAQTEVSLPFITADQTGPKHLNVKVSRAQFEKLVDSLVQRTIQPCKNCLKDASVEKKDINEVLLVGGMTRMPKVQSVVEDFFGRKPSKGVNPDEVVAMGAAIQGGVLRGDVKDVLLLDVTPLSLGIETLGGMFTRLINRNTTIPTKKGQVFSTAADNQSQVQIKVLQGERELAADNKL 491
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BLAST of mRNA_C-tenellus_contig11033.1.1 vs. uniprot
Match: A0A662Y298_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y298_9STRA)

HSP 1 Score: 385 bits (988), Expect = 2.220e-130
Identity = 193/242 (79.75%), Postives = 221/242 (91.32%), Query Frame = 1 
Query:    1 SGGVFEVKSTNGDTMLGGEDFDEALLKHLLSEFRKESGLDLSGDRLAMQRLREAAEKAKRELDGMPQTDVSLPFITADATGPKHMNLKISRSSFENLVDGLIERAIQPCKNCIRDAGLETKDVDEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIKALQGEREMSVDNKV 726
            SGGVFEVKSTNGDT+LGGEDFDE LL++L++EF+KES +DLSGD LAMQRLREAAEKAKRELDG+ QTD+SLPFITADATGPKH+N+KI+R++FE LV  LIER + PCK C++DAG+E  +++EV+LVGGM+RMPKVQ  VE FFGK PS+GVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLI RNTTIPTKK QVFSTAAD+Q+QV IK LQGEREM+ DNK+
Sbjct:   33 SGGVFEVKSTNGDTLLGGEDFDEELLRYLVNEFKKESSIDLSGDNLAMQRLREAAEKAKRELDGLAQTDISLPFITADATGPKHLNMKITRATFEKLVGHLIERTMGPCKKCVKDAGVEKSEINEVILVGGMSRMPKVQTSVEDFFGKKPSKGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLIPRNTTIPTKKSQVFSTAADSQTQVGIKVLQGEREMASDNKL 274
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BLAST of mRNA_C-tenellus_contig11033.1.1 vs. uniprot
Match: A0A7S2STT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STT0_9STRA)

HSP 1 Score: 389 bits (999), Expect = 3.140e-130
Identity = 190/241 (78.84%), Postives = 223/241 (92.53%), Query Frame = 1 
Query:    1 SGGVFEVKSTNGDTMLGGEDFDEALLKHLLSEFRKESGLDLSGDRLAMQRLREAAEKAKRELDGMPQTDVSLPFITADATGPKHMNLKISRSSFENLVDGLIERAIQPCKNCIRDAGLETKDVDEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIKALQGEREMSVDNK 723
            SGGVFEVK+TNGDT+LGGEDFDEALL HL++EF+K+SG+D+SGDRLAMQR+REAAEKAKRELDG+ QT+VSLPFITADA+GPKHMN+KI+++ FE +VD L++R + PC+ C++DAGL TKD+ EV+LVGGMTRMPKVQ +V+ FFGK PSRGVNPDEVVAMGAAIQGGVLRGDVKD+LLLDVTPLSLGIETLGGVFT L++RNTTIPTKK QVFSTA D+QSQVQIK LQGER+M+ DNK
Sbjct:  262 SGGVFEVKATNGDTLLGGEDFDEALLSHLVAEFKKDSGMDVSGDRLAMQRMREAAEKAKRELDGLNQTEVSLPFITADASGPKHMNVKITKAQFEGIVDDLVQRTMSPCEKCVKDAGLSTKDIHEVILVGGMTRMPKVQERVQDFFGKEPSRGVNPDEVVAMGAAIQGGVLRGDVKDVLLLDVTPLSLGIETLGGVFTPLVSRNTTIPTKKDQVFSTAQDSQSQVQIKVLQGERKMAADNK 502
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BLAST of mRNA_C-tenellus_contig11033.1.1 vs. uniprot
Match: A0A024U537_9STRA (Chaperone DnaK n=19 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024U537_9STRA)

HSP 1 Score: 389 bits (1000), Expect = 1.440e-129
Identity = 195/242 (80.58%), Postives = 221/242 (91.32%), Query Frame = 1 
Query:    1 SGGVFEVKSTNGDTMLGGEDFDEALLKHLLSEFRKESGLDLSGDRLAMQRLREAAEKAKRELDGMPQTDVSLPFITADATGPKHMNLKISRSSFENLVDGLIERAIQPCKNCIRDAGLETKDVDEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIKALQGEREMSVDNKV 726
            SGGVFEVKSTNGDT+LGGEDFDE LL+HL+SEF++ESG+DLSGD LAMQRLREAAEKAKRELDG+ QTDVSLPFITADATGPKH+N+KI+R+ FE LV  LIER + PCK C++DAG+  ++++EV+LVGGM+RMPKVQ  VE FFGK PS+GVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLI RNTTIPTKK QVFSTA+DNQ+QV IK LQGEREM+ DNK+
Sbjct:  231 SGGVFEVKSTNGDTLLGGEDFDEELLRHLVSEFKRESGIDLSGDGLAMQRLREAAEKAKRELDGLAQTDVSLPFITADATGPKHLNIKITRAQFEKLVGHLIERTLNPCKKCVKDAGVTKEEINEVILVGGMSRMPKVQTSVEEFFGKRPSKGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLIPRNTTIPTKKSQVFSTASDNQTQVGIKVLQGEREMAADNKL 472
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BLAST of mRNA_C-tenellus_contig11033.1.1 vs. uniprot
Match: A0A7S2RB30_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RB30_9STRA)

HSP 1 Score: 388 bits (997), Expect = 1.980e-129
Identity = 194/242 (80.17%), Postives = 219/242 (90.50%), Query Frame = 1 
Query:    1 SGGVFEVKSTNGDTMLGGEDFDEALLKHLLSEFRKESGLDLSGDRLAMQRLREAAEKAKRELDGMPQTDVSLPFITADATGPKHMNLKISRSSFENLVDGLIERAIQPCKNCIRDAGLETKDVDEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIKALQGEREMSVDNKV 726
            SGGVFEVK+TNGDTMLGGEDFDE LL+HLL EF+K+SG+DLSGD LAMQRLREAAEKAKRELDG+ QTDVSLPFITAD+TGPKH+N+KI+R+SFE++V+ L+ R + PCK C++DA +   ++ EV+LVGGMTRMPKVQ  VE FF K PSRGVNPDEVVAMGAAIQGGVL+GDVKDILLLDVTPLSLGIETLGGV TKLI RNTTIPTKK QVFSTAADNQ QVQIKALQGEREM+VDNK+
Sbjct:  208 SGGVFEVKATNGDTMLGGEDFDEELLRHLLQEFKKDSGIDLSGDNLAMQRLREAAEKAKRELDGLAQTDVSLPFITADSTGPKHLNIKITRASFESMVERLVTRTVDPCKKCVKDADISKSEIHEVILVGGMTRMPKVQETVEKFFNKKPSRGVNPDEVVAMGAAIQGGVLKGDVKDILLLDVTPLSLGIETLGGVMTKLIPRNTTIPTKKSQVFSTAADNQPQVQIKALQGEREMAVDNKL 449
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BLAST of mRNA_C-tenellus_contig11033.1.1 vs. uniprot
Match: A0A2D4C022_PYTIN (Heat shock 70 kDa protein, mitochondrial n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C022_PYTIN)

HSP 1 Score: 389 bits (998), Expect = 2.880e-129
Identity = 195/242 (80.58%), Postives = 221/242 (91.32%), Query Frame = 1 
Query:    1 SGGVFEVKSTNGDTMLGGEDFDEALLKHLLSEFRKESGLDLSGDRLAMQRLREAAEKAKRELDGMPQTDVSLPFITADATGPKHMNLKISRSSFENLVDGLIERAIQPCKNCIRDAGLETKDVDEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIKALQGEREMSVDNKV 726
            SGGVFEVK+TNGDT+LGGEDFDE LL++L+ EF+KE+ +DLSGD LAMQRLREAAEKAKRELDG+ QTD+SLPFITADATGPKH+N+KI+R++FE LV  LIER + PCK C++DAGLE KDV+EV+LVGGM+RMPKVQ  VE FFGK PS+GVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLI RNTTIPTKK QVFSTAAD+Q+QV IK LQGEREM+ DNK+
Sbjct:  234 SGGVFEVKATNGDTLLGGEDFDEELLRYLVGEFKKETSIDLSGDNLAMQRLREAAEKAKRELDGLAQTDISLPFITADATGPKHLNMKITRATFEKLVSNLIERTMVPCKKCLKDAGLEKKDVNEVILVGGMSRMPKVQQSVEEFFGKKPSKGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLIPRNTTIPTKKSQVFSTAADSQTQVGIKVLQGEREMAADNKL 475
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BLAST of mRNA_C-tenellus_contig11033.1.1 vs. uniprot
Match: A0A6U1P0W5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1P0W5_CYCTE)

HSP 1 Score: 385 bits (989), Expect = 3.990e-129
Identity = 192/241 (79.67%), Postives = 217/241 (90.04%), Query Frame = 1 
Query:    1 SGGVFEVKSTNGDTMLGGEDFDEALLKHLLSEFRKESGLDLSGDRLAMQRLREAAEKAKRELDGMPQTDVSLPFITADATGPKHMNLKISRSSFENLVDGLIERAIQPCKNCIRDAGLETKDVDEVLLVGGMTRMPKVQAKVEAFFGKPPSRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKVQVFSTAADNQSQVQIKALQGEREMSVDNK 723
            SGGVFEVK+TNGDTMLGGEDFDE LL HLL++F+KESG+DL GD+LAMQRLREAAEKAKRELDG+ QTDVSLPFITADA+GPKHMN+K+S++ FE+LV  L++R I+PCK C++DA +   ++ EV+LVGGMTRMPKVQ  VE FFGK PSRGVNPDEVVAMGAAIQGGVL+GDVKDILLLDVTPLSLGIETLGGV TKLI RNTTIPTKK Q FSTAADNQ QVQIK +QGEREM+VDNK
Sbjct:  129 SGGVFEVKATNGDTMLGGEDFDEVLLGHLLNDFKKESGIDLGGDKLAMQRLREAAEKAKRELDGLAQTDVSLPFITADASGPKHMNVKVSKAQFESLVQALVDRTIEPCKKCMKDADISKSEIHEVILVGGMTRMPKVQDTVEEFFGKKPSRGVNPDEVVAMGAAIQGGVLKGDVKDILLLDVTPLSLGIETLGGVMTKLIPRNTTIPTKKQQTFSTAADNQPQVQIKVMQGEREMAVDNK 369
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11033.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBY7_ECTSI2.230e-14590.50Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836C7W0_9STRA2.520e-13986.31Heat shock protein 70 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2V2X3_9STRA1.760e-13883.47Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
W7U263_9STRA1.630e-13382.23Heat shock protein 70 n=2 Tax=Monodopsidaceae TaxI... [more]
A0A662Y298_9STRA2.220e-13079.75Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A7S2STT0_9STRA3.140e-13078.84Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A024U537_9STRA1.440e-12980.58Chaperone DnaK n=19 Tax=Saprolegniaceae TaxID=4764... [more]
A0A7S2RB30_9STRA1.980e-12980.17Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A2D4C022_PYTIN2.880e-12980.58Heat shock 70 kDa protein, mitochondrial n=2 Tax=P... [more]
A0A6U1P0W5_CYCTE3.990e-12979.67Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11033contigC-tenellus_contig11033:118..5176 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog67593.Physo108503
PFAMsHSP70
Model size744
Max annot lvl4776|Peronosporales
KEGG koko:K04043
KEGG TC1.A.33.1
KEGG Pathwayko03018,ko04212,ko05152,map03018,map04212,map05152
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.21e-130
EggNOG OGsCOG0443@1|root,KOG0102@2759|Eukaryota,3Q81K@4776|Peronosporales
Ec32 ortholog descriptionHeat shock protein 70
Ec32 orthologEc-20_003770.1
DescriptionMreB/Mbl protein
Cds size744
COG categoryO
BRITEko00000,ko00001,ko03019,ko03029,ko03110,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11033.1.1prot_C-tenellus_contig11033.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig11033 118..5176 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789160.0286405-CDS-C-tenellus_contig11033:117..1981680789160.0286405-CDS-C-tenellus_contig11033:117..198Choristocarpus tenellus KU2346CDSC-tenellus_contig11033 118..198 +
1680789160.0428889-CDS-C-tenellus_contig11033:1215..13051680789160.0428889-CDS-C-tenellus_contig11033:1215..1305Choristocarpus tenellus KU2346CDSC-tenellus_contig11033 1216..1305 +
1680789160.0519621-CDS-C-tenellus_contig11033:2478..25711680789160.0519621-CDS-C-tenellus_contig11033:2478..2571Choristocarpus tenellus KU2346CDSC-tenellus_contig11033 2479..2571 +
1680789160.0607562-CDS-C-tenellus_contig11033:2854..29431680789160.0607562-CDS-C-tenellus_contig11033:2854..2943Choristocarpus tenellus KU2346CDSC-tenellus_contig11033 2855..2943 +
1680789160.072574-CDS-C-tenellus_contig11033:3680..38281680789160.072574-CDS-C-tenellus_contig11033:3680..3828Choristocarpus tenellus KU2346CDSC-tenellus_contig11033 3681..3828 +
1680789160.0817337-CDS-C-tenellus_contig11033:4513..46511680789160.0817337-CDS-C-tenellus_contig11033:4513..4651Choristocarpus tenellus KU2346CDSC-tenellus_contig11033 4514..4651 +
1680789160.0911381-CDS-C-tenellus_contig11033:5071..51761680789160.0911381-CDS-C-tenellus_contig11033:5071..5176Choristocarpus tenellus KU2346CDSC-tenellus_contig11033 5072..5176 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig11033.1.1

>prot_C-tenellus_contig11033.1.1 ID=prot_C-tenellus_contig11033.1.1|Name=mRNA_C-tenellus_contig11033.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=248bp
SGGVFEVKSTNGDTMLGGEDFDEALLKHLLSEFRKESGLDLSGDRLAMQR
LREAAEKAKRELDGMPQTDVSLPFITADATGPKHMNLKISRSSFENLVDG
LIERAIQPCKNCIRDAGLETKDVDEVLLVGGMTRMPKVQAKVEAFFGKPP
SRGVNPDEVVAMGAAIQGGVLRGDVKDILLLDVTPLSLGIETLGGVFTKL
INRNTTIPTKKVQVFSTAADNQSQVQIKALQGEREMSVDNKVGTHAS*
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mRNA from alignment at C-tenellus_contig11033:118..5176+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig11033.1.1 ID=mRNA_C-tenellus_contig11033.1.1|Name=mRNA_C-tenellus_contig11033.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5059bp|location=Sequence derived from alignment at C-tenellus_contig11033:118..5176+ (Choristocarpus tenellus KU2346)
AGTGGTGGAGTGTTTGAGGTGAAGTCAACCAACGGGGATACTATGCTTGG
AGGAGAGGACTTCGATGAGGCTCTTCTCAAGGTACATTCATTGTGCATTT
TCCTCCATAGTCCTGCTGTACTTTCCGGTTAGTAGATTGTTCATCTCCTT
GATTCTTTTGCCACGATATCTGATTAATTTGCCTTTGGTCAACAAAGTCT
GTCCTTGTCGATGATTTTTTTTTCTGACCTATGTAATTTCATTGTTTTGT
CTCAGGTCTCCATCAATTGCTTTGGCGTATCCTTGGTGACTTTTGATTTA
ATATGTATGTATTTGTTTATGAATTAGGCGCGGAAGATATGTCGTTGGAT
TTTGTAGTGACGAGGTGATATATACTAGTAGCAGTGATAATATAATTTAA
TTTAAGTTTAGGGTTGGGGTAAGAGATGCACCTATGACTGCGAAGAATGT
TTCGATATTCACCTATGAATGCGAAGAATGTTTCGATATTCACCTATGAA
TGCGAAGAATGTTTCGATATTCACCTATGAATGCGAAGAATGTTTCGATA
TTCACCTATGACTGCGAAGAATGTTTCGATATTCACCTATGACTGCGAAG
AATGTTTCGATATTCACCTATGACTGCGGTGTGAGTTGAGAGTTTTCAAA
TGCAGGGTCCCCTTTGAGGATGGCGTGGACAAACTCTCTTCAGCACATGA
TCATGACATGATCACATGAGGAATAACGAAAAAAACAATAAAGCGCAACT
TCAATTAATGTGTGGGTTGCCGTAACTTCAATTAATGAGTGATTTCTTGA
TCAGAAATTTTTGTGTGTGTGATCTGACTCATGAGCATGGTTTGTTTGAC
AGTGTCTTGTGAGTGTTACGCTGTTCCCTTCACCACATATAGAAAAAATA
TATATGGTAGTGCCAAAGCGACTTTCAATATAAGCACACAATGAGACGTA
CATCCTCCTTCAGTATGAACTTTACTCTTGATTACTTCCTTGCAAACAAA
TTAAACATGTTTGATCCCTGTGTCCCACTTTTGTGTGTGGGTGTGTGGGT
GTGTGGGTGTGTGGGTGTGTGGGTGTGTGGGTGTTTTGGTTGAAACAGCA
CCTACTCTCAGAGTTTCGCAAGGAATCAGGGTTGGATCTGTCAGGGGACA
GGCTTGCCATGCAACGACTCCGTGAGGCAGCAGAAAAGGTGATGTTATGT
GATGCCATGTTTTTGTAGGGGAGATATATATATATATTTTTTTATGTAAG
AGATTTTGTGTAGGTTTTTTGGGGGGACTTTTGGTGATATTGTTGGTGAT
TTTTTTTTTGGTGAGACTCTTTTTCTGTTTTGTCCATTGTAAGCTGAAGG
CGTTCGCTTGACTTTTATTTTTTGGAAGGTTGGTACTGCAGTATTGCGTG
AGGTTTTGGTTGTTTTAAAGGACCTTCTGTTGTACTTGTGGAAAATAAAA
TTTGTGTACTATTATTTCATTTTTGAATTGGTATTTGAAGTTATTTAACG
GTGGGGTTGGTGAGTGAAGACATTTCTTGCTTTGTCATGTTTGAGTGTTT
ACTCTGTAGCTACCAGAGGAAACTAAACTACTATGTACTGTACTGACATT
CAACTTTTTTCAGTGTTTGAGGTTAGAGGATGGGGTATGAGATCTGAATG
GATTCTTCTGTAGAGAGGGAGTGTTGCCACGGGTTGAAATATGTGTTCAA
TGCACCTTGTTGGTGGATAGATTGCTAAGAATGGATTGTATACAAGCTCT
GCTGAGTTAAGGTTAGGGTTGTTGGATGCTGTGGGACTGGGAGGAGGAAG
GGCCTGTTGATCTGTCTCGAAAGGCGTGTTGACATTGTGATGTATGTGAG
AATTATAGTTAAGTGAGTGTTGGTTTTGTTCTAGTGCGATGTATACATGT
ATTTGTTTGAAATATGATGATATTTCAAGCTATCAGTTTTTTTTATCACT
CTCTCCGTATTGATTTTTAAAATGTTTATTGCGAGTAGTAACATTTTTTT
TTTTGGAGGGGGGAAGGAGGGTGTGTGTGTGCTGGAGGATTGAGCTTTTG
TATTCCTTTTTTGGCGTGTTAGTGACATGGGGTGAATGTGTTGTCCTTTT
CTATACTTTTTGGCGTGTTTCTAAAGCGATTGGTTCAGAGTATGGGGGTC
CCTTCAAATATGGATGGGCACACAATGTGTGTTATTGAATAATCCAAGTA
GTTGATGCACGACTTGAGCTAAGTAGGTGGCATTAATACATGCTAACATA
TATCCTCCTAACAAGTATGTCACCGTGATGCTGTTTGTGTTCGTGCTTCT
CCTTCACCATGGAATATATATATATATTTATTTATAATGGTTTAATGATG
TGGATGGACAGGCAAAGCGTGAGTTGGATGGCATGCCGCAGACAGATGTG
TCACTGCCGTTCATCACTGCAGATGCAACTGGACCCAAGCACATGAACCT
GAAGGTAACCATGAGGAGTTCCAGGGTTGTGTACAGGTTCTCTGGGTTGC
CACCACGATGTTGGCTACTACACTATAGAGTATACTGCAAAGAAGTATAT
TAAAATGAAAAAAATCATTAAAAAAAATGTACTTGGGGGAGTATTTTTCG
TCTCAAGAAAAAATTGTGGGTTGTGGTGGGATATAATTAGGTAAATTTAT
ACTACTTTCTTTGCTTTTGTCTTAAACTTCCACCAACCTTGATGCCCCCC
CCTCCTCCCCATCCCTCATTTTTTTGTTGGCAAACAGATATCTCGCTCGT
CTTTTGAGAACCTGGTGGACGGGCTCATTGAGAGGGCTATCCAGCCTTGC
AAGAATTGCATTCGGGATGCTGGACTGTGAGTGCTTGGCTTTTCTAGATT
AGGGAGTCTCCTCACCCCTCAAGTGTGATAGATGATGCTATGTTCTATTC
TCTGATTTGAGTTGTCTTACCTACCTTTTTATTGATATGTTGATATGTGA
TACCTCTTTTGACCAATGTACATCAGGAACATACATGTCTCACTTTATGA
GATCTCCTGGTTCAAATTTATATTGTCACTCCTGGAGTTTTGCACATGCT
TAGGAGGTGTATGAATATATGTGTATGCTATATCCTCCCCCTCCCCCACC
GCTCACCCATTTCCTCTATTCCAATCAAAGACAGAAGATGTAACTCGGCG
GTTATATGCTACAAAGTACACTGTTGATTTTATTGTTTACCATGTTGTCC
ACTGTCTTGTTTGGTATAATGCCCCTTTTTCATGTTTTTTTTTGTTACTT
TATTATTAAATTTTGTATTATTACTGTTTCTCAATTTTTTTTTGTGATTG
CACCACAACAATGCATACAGATTGTCTTTCTTTGAGCTTTTTTGATTAGA
TGTTCTTTGGGATAGTGATGCCATTGATGGTGTTGTCGATGGTGTGGATG
TACACTCTACATTGAGAAATAAAGTGGGACGTATATTTGCAATGTTTTTT
AATTTATAGTTTTGAAATCAAGATTATGTAGTGAAGGAACTCTTCTGTCC
GCAGGTGGTATATTCTTATTTTTGAAACATTTTAAGTGAAAACACTAATG
ATTATCTCTGCAGGGAGACCAAGGATGTGGATGAGGTGCTTTTGGTTGGT
GGCATGACACGGATGCCTAAGGTGCAGGCTAAGGTGGAGGCGTTCTTTGG
CAAACCGCCTTCAAGGGGTGTAAACCCTGATGAGGTTGTTGCCATGGGGG
CTGCAATCCAGGTGCGGCATTGTGTTTTGAGGAGATAAGGAAGGCGGGGG
GGTTCAGAATATGCAGGATGTTATCTGCGTTGTTTCTTACTTGGCAGTCC
AAAGCACTGTTGATGGATCTTCTGGGAGGGGAGGAGTTTGGGATGTGTTC
TGATTTTACTGATATTTAACGTTTGTTCCTCTTTTTTTTTACTGTTTCTA
GTTTATGGCCGCACTTTTGAGAACTTTTGAGAACTTTTGAGAAGTCTTAT
ATTTTTTGTGGAGTATGCTCTACTGTGTTAGTGATTAGACTGTGCATGTG
CACACCTGTGCAAGGGAGTAAACTCTACTCTGCAGGGGACCGCTTGTGTT
AGTTGCTCTTTGGAGTGGTGTATATGAATATTGTTTTTTATTTTTGTTTT
GTTTTGATGAGATTGTATACAAAATAGAAACAAAAGAGTGTGGAAATGGA
TACATTTTGATTTTTTTGTTCTGAATTGTTGTTATCTTTCTCTTTTCTTT
TTTTCAAAGGTTCGTGAAACAGATCATTATTTTTGGTTTTTGGTTGTCCA
TCTTTGCTCCTCATCGTGGTACTGTGAGTTGCTGTTATTTTTTTTGCGGG
TTAGGTTCCTCAGATAGTGCTTACATGTGTTGTCCTGTCTGTATATACAT
GTAAGGCGTTTTTCTGTACATTGTATGACGTTTGATTTGTTCTTAGGGAG
GAGTGCTCAGGGGAGATGTCAAGGATATCCTGCTGCTGGATGTTACGCCT
CTGTCTTTGGGAATTGAGACCCTGGGAGGTGTGTTCACTAAGCTGATTAA
CAGGAATACAACCATTCCCACGAAAAAGGTTCAGGTGAGAGTTTTCAAGA
GCAAGGATATGATGTCTTTATTGTACAGGTATGTATGTTTTACTATTTGT
TGGTATTTTTATTAGACATTGATCAGAGTTGGGATGTGCTACTCTTGTCA
TAGATTTTGTCATAGCCTTGAACAGGCATTTTTCTCTGTTTTTTTGTGTC
TGTTGAACCCACTTCTTTTCTATTGAAGTTCAATCAAGGAAACTGCTTCC
AAAATTGGTGTGTGTGAGCAGTCCTCTTTGTTTATGTGTCTTTTAAAGTC
ACCATATTTTTGTTTATTTGCATCTTAGGTTCTTTTTTGAAAAAGAGGTT
ATGAACAGTAATTTAGTGAATCTGCTCTGAAGGTACTTGCCTCATACTAA
TAGGAGAGATGGTTCTTACTTTGTTCCTGAACATGGTTTTCATGGATAAA
ATAGGTGTTTTCCACTGCAGCTGACAACCAGAGTCAGGTTCAGATCAAGG
CCCTGCAGGGAGAGAGGGAGATGTCAGTAGACAACAAGGTGGGTACGCAT
GCAAGTTAG
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Coding sequence (CDS) from alignment at C-tenellus_contig11033:118..5176+

>mRNA_C-tenellus_contig11033.1.1 ID=mRNA_C-tenellus_contig11033.1.1|Name=mRNA_C-tenellus_contig11033.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=744bp|location=Sequence derived from alignment at C-tenellus_contig11033:118..5176+ (Choristocarpus tenellus KU2346)
AGTGGTGGAGTGTTTGAGGTGAAGTCAACCAACGGGGATACTATGCTTGG
AGGAGAGGACTTCGATGAGGCTCTTCTCAAGCACCTACTCTCAGAGTTTC
GCAAGGAATCAGGGTTGGATCTGTCAGGGGACAGGCTTGCCATGCAACGA
CTCCGTGAGGCAGCAGAAAAGGCAAAGCGTGAGTTGGATGGCATGCCGCA
GACAGATGTGTCACTGCCGTTCATCACTGCAGATGCAACTGGACCCAAGC
ACATGAACCTGAAGATATCTCGCTCGTCTTTTGAGAACCTGGTGGACGGG
CTCATTGAGAGGGCTATCCAGCCTTGCAAGAATTGCATTCGGGATGCTGG
ACTGGAGACCAAGGATGTGGATGAGGTGCTTTTGGTTGGTGGCATGACAC
GGATGCCTAAGGTGCAGGCTAAGGTGGAGGCGTTCTTTGGCAAACCGCCT
TCAAGGGGTGTAAACCCTGATGAGGTTGTTGCCATGGGGGCTGCAATCCA
GGGAGGAGTGCTCAGGGGAGATGTCAAGGATATCCTGCTGCTGGATGTTA
CGCCTCTGTCTTTGGGAATTGAGACCCTGGGAGGTGTGTTCACTAAGCTG
ATTAACAGGAATACAACCATTCCCACGAAAAAGGTTCAGGTGTTTTCCAC
TGCAGCTGACAACCAGAGTCAGGTTCAGATCAAGGCCCTGCAGGGAGAGA
GGGAGATGTCAGTAGACAACAAGGTGGGTACGCATGCAAGTTAG
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