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Homology
BLAST of mRNA_C-tenellus_contig1103.1.4 vs. uniprot
Match: D7G5E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E7_ECTSI) HSP 1 Score: 210 bits (535), Expect = 1.100e-51 Identity = 128/233 (54.94%), Postives = 148/233 (63.52%), Query Frame = 3
Query: 3006 PVVSRVKTMDDSFLRKVSIMLKRNQVKIKKFQQLTDRFRGGLINAKGYYEQVEELFGEANVEQITGPLLGALPEKDKRKTLQDAIKKAQKNKLAATXXXXXXXXXXXXXXXGFNLFG-WGKKEPASAQSTPA--PVVAKKGSVKGASSA-------GSDPFAAVYSKLSGANLALFKARTDLYLRGGINARNYYDSLERVFGKSNMAAEVPGVLKALPANKRSLLNSVYTGLT 3674
P+VSRVKTMDDSFL+KVS+ML+RNQ KIKKFQQLTDRFRGGLI A YY VEELFGE NVE+I GPLL ALPE DKRKTLQ KAQ+ K +LFG WG K A + PA P AKKG +DP+A +K+SG + LFK RT LY RGGINARNYYD+L VFG ++A++P +LKALP NKR LL V GL+
Sbjct: 779 PIVSRVKTMDDSFLKKVSVMLRRNQSKIKKFQQLTDRFRGGLIKAPVYYAGVEELFGEDNVEEIIGPLLAALPENDKRKTLQAVYSKAQRAKNGEGESDGGGIA---------SLFGGWGGKSKADTAAKPAAAPAPAKKGXXXXXXXXXXXXXXXAADPYAFAAAKISGKDYELFKTRTTLYARGGINARNYYDTLATVFGAKGVSAQLPALLKALPQNKRKLLQDVVDGLS 1002
BLAST of mRNA_C-tenellus_contig1103.1.4 vs. uniprot
Match: A0A6H5L7G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G1_9PHAE) HSP 1 Score: 158 bits (399), Expect = 3.910e-35 Identity = 141/240 (58.75%), Postives = 155/240 (64.58%), Query Frame = 3
Query: 2850 SNPFGGLFGSAGSSPKRTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVVSRVKTMDDSFLRKVSIMLKRNQVKIKKFQQLTDRFRGGLINAKGYYEQVEELFGEANVEQITGPLLGALPEKDKRKTLQDAIKKAQKNKLAATXXXXXXXXXXXXXXXGFNLFGWGKKEPASAQSTPAPVVAKKGSVKGASSAGS-------DPFAAVYSKLSGANLALFKARTDLYLRGGINAR 3548
SNPF GLFG +G S T+A XXXXXXXXXXXXXXX P+VSRVKTMDDSFLRKVS+ML+RNQ KIKKFQQLTDRFRGGLI A YY VEELFGE NVE+I GPLL ALPE DKRKTLQ KAQ+ K XXXXXXXXXXXXX AKKGS+K ++ G DP+A +KLSG + LFKART LY+RGGINAR
Sbjct: 865 SNPFSGLFGGSGVS--GTSAKKXXXXXXXXXXXXXXX---------------PIVSRVKTMDDSFLRKVSVMLRRNQSKIKKFQQLTDRFRGGLIKAPVYYAGVEELFGEDNVEEIIGPLLAALPENDKRKTLQAVYSKAQRAKNGEGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXAKKGSMKKPAAGGKXXXXXXXDPYAFAAAKLSGKDYELFKARTTLYVRGGINAR 1083
BLAST of mRNA_C-tenellus_contig1103.1.4 vs. uniprot
Match: A0A835YR94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR94_9STRA) HSP 1 Score: 154 bits (390), Expect = 4.230e-34 Identity = 115/222 (51.80%), Postives = 141/222 (63.51%), Query Frame = 3
Query: 3024 KTMDDSFLRKVSIMLKRNQVKIKKFQQLTDRFRGGLINAKGYYEQVEELFGEANVEQITGPLLGALPEKDKRKTLQDAIKKAQKNKLAATXXXXXXXXXXXXXXXGFN----LFGWGKKEPASAQSTPAPVVAKKGSVKGASSAGSDPFAAVYSKLSGANLALFKARTDLYLRGGINARNYYDSLERVFGKS--NMAAEVPGVLKALPANKRSLLNSVYTGL 3671
K MDD+F++ VS +L+R+Q KIK+FQ +TDRFRGGL+ A YY VE LFG ANV ++ PLL +LPE+DKR+ L+DA+KKA K XXXXXXXXXXXXXXX LFG+ A VAK +DPFA KLS AN LF ART L+ RGGINARNYYD+LE +FGK + A + V+ ALPA+K L+ VY GL
Sbjct: 860 KKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXX-AGAVAKA----------ADPFAFAQGKLSAANYDLFVARTKLFARGGINARNYYDTLETLFGKGPRGVGATIGNVVNALPASKARLVEDVYKGL 1070
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 5031 |
| Hectar predicted targeting category | signal peptide |
| Exons | 12 |
| Cds size | 3378 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789159.7780333-UTR-C-tenellus_contig1103:1841..2143 | 1680789159.7780333-UTR-C-tenellus_contig1103:1841..2143 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig1103 1842..2143 + |
| 1680789159.9092467-UTR-C-tenellus_contig1103:12962..14313 | 1680789159.9092467-UTR-C-tenellus_contig1103:12962..14313 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig1103 12963..14313 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789159.7895398-CDS-C-tenellus_contig1103:2143..2203 | 1680789159.7895398-CDS-C-tenellus_contig1103:2143..2203 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1103 2144..2203 + |
| 1680789159.797907-CDS-C-tenellus_contig1103:2681..3032 | 1680789159.797907-CDS-C-tenellus_contig1103:2681..3032 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1103 2682..3032 + |
| 1680789159.8073637-CDS-C-tenellus_contig1103:3312..3375 | 1680789159.8073637-CDS-C-tenellus_contig1103:3312..3375 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1103 3313..3375 + |
| 1680789159.8181462-CDS-C-tenellus_contig1103:3853..3979 | 1680789159.8181462-CDS-C-tenellus_contig1103:3853..3979 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1103 3854..3979 + |
| 1680789159.8277745-CDS-C-tenellus_contig1103:4323..4446 | 1680789159.8277745-CDS-C-tenellus_contig1103:4323..4446 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1103 4324..4446 + |
| 1680789159.8390377-CDS-C-tenellus_contig1103:4877..5105 | 1680789159.8390377-CDS-C-tenellus_contig1103:4877..5105 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1103 4878..5105 + |
| 1680789159.8515673-CDS-C-tenellus_contig1103:5310..5403 | 1680789159.8515673-CDS-C-tenellus_contig1103:5310..5403 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1103 5311..5403 + |
| 1680789159.860978-CDS-C-tenellus_contig1103:6242..6350 | 1680789159.860978-CDS-C-tenellus_contig1103:6242..6350 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1103 6243..6350 + |
| 1680789159.8697946-CDS-C-tenellus_contig1103:7131..8757 | 1680789159.8697946-CDS-C-tenellus_contig1103:7131..8757 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1103 7132..8757 + |
| 1680789159.8786995-CDS-C-tenellus_contig1103:9324..9435 | 1680789159.8786995-CDS-C-tenellus_contig1103:9324..9435 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1103 9325..9435 + |
| 1680789159.8880017-CDS-C-tenellus_contig1103:10410..10766 | 1680789159.8880017-CDS-C-tenellus_contig1103:10410..10766 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1103 10411..10766 + |
| 1680789159.8969803-CDS-C-tenellus_contig1103:12829..12962 | 1680789159.8969803-CDS-C-tenellus_contig1103:12829..12962 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1103 12830..12962 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1103.1.4 >prot_C-tenellus_contig1103.1.4 ID=prot_C-tenellus_contig1103.1.4|Name=mRNA_C-tenellus_contig1103.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=1126bp
MKRPFTTFGALAFISIQLDTGKAFKVSLGPQRHTVPYTGRNHGIVPPPSK
PVASQPRFDSQTMATGGVETASNDVDAQDETDMKIQTTVEEKGASIEEVN
EAEVNVDTITTSEPVRSVEKDADSTPKVAPVQPRRNEFDSVEKALEYVRQ
ISAANLEQKKVAELAKRSKAVSETETSEPPVTAPESAKSAPAKPVAARPP
ASEASVASPGDVLKPTKAVSARPEGVKAKSVAPPSTPVKREVIPPKEAEV
VKIKTPDEVKTTVGDAKGESETESAAEPAAEPAAEPAAKSTAEPAATEES
TSQLKAAASITATKKESKESSPSMFEGLFNMGSDSIEDFFGIKVKSVLVD
TTKPPPKEQPLPNLDSKKVDALIEEDGLTEVTLKGKFRELEEEAAEKERA
AKESTKGEKSSVKEATVPKPTTPKSGAAPSSPFAGLTSMFSASPKPVAKE
AAEVPRPKTTPPPPKVTKVKTLKVTSAPAPAPASVPSPSLASTPTPSSEG
PGFWESMFGTPVDDGDVNTLPEKVDSARSMPVFTPPPAPAKAPVKASVKG
EEKKTSTRAPSPEEKKAAPASTLFGMFGGSSQATKEVPPPAAKPKVAPAS
TPEPKAAPSKGGAAPSSPLAGLTSMFSMSPKPAAKKEVEVPPSKATTPTP
TKVAKAKTLKVTSAPAPAPVSSPPTPMSKGPGFWESMFAPPVDDEEVNTL
PEKVDGARAMPVFAPPPAPAKAPAAKKVSAPPAPAPKEKKAAPAPSMFSM
LGTNVSQKSSPTPSKADTQPVTPPPKTAANKAPPAGGFNLFGGMSAKKTA
PAPAPAPAPAPVVEEKKSSSFMDKLFTTSKPAPSLAPEVEPVAKPSPAPS
NPFGGLFGSAGSSPKRTAAAAAKPKPKPKPKPKPKPKPKPKPAAPVSPQP
VPVVSRVKTMDDSFLRKVSIMLKRNQVKIKKFQQLTDRFRGGLINAKGYY
EQVEELFGEANVEQITGPLLGALPEKDKRKTLQDAIKKAQKNKLAATATA
GGGGEGEGEGEGGFNLFGWGKKEPASAQSTPAPVVAKKGSVKGASSAGSD
PFAAVYSKLSGANLALFKARTDLYLRGGINARNYYDSLERVFGKSNMAAE
VPGVLKALPANKRSLLNSVYTGLTN* back to topmRNA from alignment at C-tenellus_contig1103:1842..14313+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-tenellus_contig1103.1.4 ID=mRNA_C-tenellus_contig1103.1.4|Name=mRNA_C-tenellus_contig1103.1.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=12472bp|location=Sequence derived from alignment at C-tenellus_contig1103:1842..14313+ (Choristocarpus tenellus KU2346)
CATTGTTTTGTCTATAATTGTACATCCTGCCTCCCCCAGAGGTGCAAGTT
GATATCAAAACCCTAACACTACCGATTGCCAGATCAGGTGTCTCTATGTA
TGTATGTTGAGAATCTGAGTATCACTATTACCCACTAACACAGGACAAAA
GGTGAAGCCGCAATAGCCCTCAAACAAGTGTTCGAGATCAGGAGGAGAGG
CTCTCCGCCTATCCTCCATCAGGATCATTCTGCTTGGGAGAAGTGCGGAG
GTGGTTTATTTGAACCAGTTGCCATCTTGAGTGGGAAGAAAGAGGGGTTG
TTATGAAGCGACCCTTCACAACCTTTGGGGCGTTAGCCTTTATCAGCATC
CAGCTAGACACGGTGAGTGGATGAAAGAAATTAAAATATTACTTTGACAC
AGCTGCTATGGAGGTGGCTCTAAGTTTACCCCATTTTACCGAGTTGCGGG
AGACAAAGCGAGTGTCAATTTTATCTTAAGGGTGGAGGGACATCAATCGT
GCTGTATGGTGTGAGGTGAAGGTTTGCCCTTCTTTGCTTGAGCTCGCATA
TTTTGATTAATATCGAAAAATGTGCAAGTAGGACAACGTCAACTTGGCAG
TTCTTTTCCTCTTCTCACTAGCTCGGATTTAAACATGCACGTATCCACAC
ATGTCGCTTCTCATCTTCAATGTTGCTTCCTTGTACATGGAAACCTTACT
GTAGCGTTAAAGAACTCGATAAATCCTGCTTGTATGAAACGACGCAATTC
TGTGCCTCATATTGGTTGCATTCCTTTGTTGACTATGGGTTGTCTTCATT
TGCAACTTGACGATATGTAACCCATGCACCATACCTGCAGGGCAAGGCAT
TTAAAGTTTCCTTAGGACCACAGCGACATACTGTTCCATACACCGGAAGA
AACCATGGCATTGTCCCACCACCTAGCAAGCCCGTGGCGTCTCAGCCAAG
ATTCGACTCGCAGACAATGGCTACTGGTGGAGTGGAGACTGCTTCTAATG
ATGTTGATGCCCAGGACGAAACGGACATGAAAATTCAGACCACTGTTGAA
GAGAAGGGTGCAAGTATTGAGGAAGTTAATGAAGCCGAGGTCAATGTTGA
TACTATCACTACATCTGAGCCTGTGAGGTCAGTGGAGAAGGATGCGGACT
CGACGCCCAAGGTCGCACCTGTGCAACCGCGGCGAAATGAGGTACGGTGG
GATCGGTCAGCGACTGGTACCTGTCCTTGTTAGCACTCTCCGATGTTGTC
AGATAAGCCTAGTTGCCTTTGTCCTGCCCACTGTTGTTGTCACTTTGTCC
AGAATGCGTCAACCCTTTTTGCATGTTCAACATCGTCAGTTCTCTTGTGC
TTCATCACATTTTCTGACCAAATCACCCCAGTCAGATACAAATGCATGAG
GAAATCTAATGCTCATGAATACCTTGGCCTGTTCATTTGACCATCTTTTT
TTTGCTCTGTGTGGATTCAAGTTTGACTCAGTGGAGAAAGCACTAGAATA
TGTCAGGCAAATCAGTGCAGCAAATCTCGAACAGGTGAGGTGGTATCAGC
ATCAAGCTGAGTGCAAGGCATCTACAAAAGGGGTTGGGGGCTGGGGTGGT
TGCTTGTGTGCTATTGTTCAGCTATCATCAAAGACTGTGACATTCAAGTT
TGTAGTGCTTTGAATAGGGTTAGGGTTAGGTACCGGAGTGTACATGTTGC
CATATTTTTTTTTGCTGGTTATTGTGTAGTAGTATTGCACAGAGAGGTAA
ATCTTTAACTCATGACATGTAATCTTCACTGTATACCTTTGTATCAATTT
AGCATCAAGAGATAAGATATCTCAAGTGTGTATTGATGAGACACAATTGC
TTAGGATGCTGTCAGGTTGTGCTCATGTCCCAGCCACACCATGCATTCAT
GTGTGTATTGATGAGACACAATTGCTTAGGATGCTGTCAGGTTGTGCTCA
TGTCCCAACCACACCATGCATTCATGTGTGCACCAACTCGAATCATTTGC
TCTACTTCTCAGAAAAAGGTTGCTGAACTGGCAAAGAGGTCGAAAGCTGT
ATCAGAAACTGAAACATCTGAACCACCTGTGACTGCACCGGAGTCTGCAA
AGTCAGCACCGGCCAAGCCAGTAGCAGCCAGGCCGCCGGTGAGTGGAGTG
GTGGGAGTATTCTTAGCGACTTGTTACCTAAAGTGCAATACATAAGTAAC
ATGGTGTGTATGTTTGATATTTCTTGGCGCCCAGAAATATTTTATTTCAT
GATTTGTTCTTTGACTTTTTTTTTTTGGTTGTGTGCTGTGTACCTGAAGC
TAGTTTACCAATAACACCCAAATCTGCGGCACAGGGCTGATTCAGATTCT
GCTGGCAACCTATCCAAACAAAAAGCGGTTCTTGGAGGGGCCTATGAGGC
TTGTATCATGCACGAAAATATGGGCTCTAGCTAGACCTCACCTACACTTA
CTCTTGCTTGCTCCATGCCCTTGTTATTTTAGGCCTCTGAGGCATCCGTA
GCTTCACCAGGTGATGTGCTCAAACCCACAAAAGCTGTGTCAGCTCGCCC
TGAAGGTGTAAAGGCAAAATCTGTTGCCCCACCATCCACCCCGGTAAAGA
GAGAGGTGAGAGAGGGAGCTACTGGAAGAAAGTCTGTTGGTCTGATGGTA
TATTATTGTGAGGAGAGGATTGATTGGACTTCTCGAATGTATCCTATTAG
GTCAGTGTAGCATTGAGACCGGTTCTTTGTTTATGCTTGTTGCTGTTCAA
GCCATGCGTTGGTAATTAGCAGTCTTGTTACGACCTCCATCAAGGAGATG
TAGAGCATGTGGGTGGGGAAGGCATGGCTTTTGAAGTGGGATTTGGCCAA
AGTAACTTATTTGTTTTCTTTCAACTGTCTTGATTACCTTTGTTACCTTG
GTATTTTTTAACTGTTGCTTGATGTTCATAATACATTGCAGAATAACGGT
GACAGCAGATGTTGAAGGGTTTTTTGATATCTCTTGAAGAATGCCCTAGT
ATCTCACGTTTTCCCTCCTGTCTATGATCCTTTAAGGTTATCCCTCCAAA
GGAAGCAGAGGTGGTGAAGATTAAGACTCCGGATGAGGTCAAGACTACAG
TGGGAGATGCTAAGGGTGAGAGTGAGACTGAGTCTGCAGCTGAGCCTGCT
GCTGAGCCTGCTGCTGAGCCTGCTGCTAAGTCTACTGCTGAGCCTGCTGC
TACTGAGGAGTCTACTTCCCAACTCAAGGCTGCAGCATCGATAACAGCCA
CCAAAAAAGAATCGGTTGAGTGACACTCTCCCCTTGACACACTCCCCTTG
ACACACTCCCCTTCTGCCCCGTGTGAAATAGACCAGCTGAATATCAAGGA
CGATATTCAATTATTATGTAGTGTTTGCTTTCTTCGTCACGAAACATTGG
ATGGGTGAGTTAAGTGGTAACTGCTAATAATTTATTGCTGTCTCTTTTGC
CCTCCTCCCACCTTATCAGAAGGAGTCATCGCCATCCATGTTTGAAGGCT
TGTTCAACATGGGCTCAGATTCCATCGAGGATTTCTTTGGGATCAAAGTG
AAGTCTGTCCTGGTGCGTGTTCTCTCGACTGACATACTCCCTCTGTACAA
CTGATAAACTCCCTCTGCACAAGAAGCTTTGCTGATGTATGGCTCGTTAC
TGCCTTGTGGTATTGCTGGTGAACAAGGTGGTACAGTGGTTGAAGAAGCA
GTGTTGTGAATCTTAGCTTTGATTGGACCATTGTGGATTGATACAATCAC
CATCAAGTAAAATCAAGTAAAACCGAAAACCAAAGGGAATTTTTTTGGAA
TTTTTTTGACAGGTTTCTTTTCGCTGGAGCGTTTTCCTCAGCACGCATCA
TTTGCAGAGTTTGGCAATTATCAGGGTACTATTATTGCAATATGTGTAAG
TTTTAATTTTTAATTTGAATTTGAGTACACTTTTATTTTTGTCGTGTGGA
GAATTTTCCGGAACACGATGAATGGTTTCCTTTATCCTGATCCTAGCTCT
GTCCCTGACACTGCATTTTTGAACAAAAAGAAGTTCCTGAATTCAATCGA
GTTTCTGGTGGCTGCTGTGCCCCGCCCCCCCCTCCTTCCCTGATTTGTTC
AACTGTAGAGTAGATGTACTTGTGGAATTGCAAGATAAGGGTTAGGGTTG
GGGGTTGCAGGAGGGAGATGTGACGTTCTATTCCTATTTTTCTGCACTAG
TTTAGGCCCTGTTAATTTACCGATTTCTCTTGCACTGAAATGAATCAGAA
ATGAGTCCTTTGCTGTGATGCCTGATTGCTCAAGGCTGGGATTCACGCCT
TGTTACTTGTATTGAGTGAGGAGGTTTGTGGTGGATAAGGTAAGGAGTGG
GGTTCGTACACATGCCCACCCAGAGCAGCTGTTGTTTGTTGTGTTGATCA
GGTGGACACCACCAAGCCACCTCCGAAGGAACAGCCCCTGCCCAACCTCG
ACTCTAAGAAAGTGGATGCGCTTATTGAAGAGGATGGACTTACTGAGGTG
ACCCTCAAGGTGAACACACATATATACACGTACATATATATTTCTAAGTA
TGCATGAATGTTCAAGTTTGTAAACAAAAGCCGAAAAACTTAGGGTTAGG
GTTCTGAGAGATGCGGCGCATTAGCCCTTAAAAGCGTCAGAGGTTGGGGC
TCAGCAGGCATTTCATGTGGTATACCTTATTCTGTTTGTGGTGTGACTTC
TGAGTCTTAGCCCCTGGGTACATATGTTATGGTGTGCTTGGACCTATCTA
TTTGTGAAGGGACTGTTTACAGTATGATCTCCATGAGGTGTGATAGTTAC
GTAATTGCTTCTGGTCGTTCTGTAGGACTTGCAAGGAAGTAGAGTCACCA
TTCCCATCTCCTTTTCCCATTCTCATTCTCATTCCTATTCTCACGTAGGT
CACGAAGTATCACAGCTCTGCGATTTTTGTTGGATGCACAATTGTGTTGA
AATTTAGTAGTGGAAGCCCTTGTTTCTTGTTTTTCTCCTTTCTTGTTGAA
TCAGAATGTTGATATTATGATACTACTGTTCTTCTGTGCATGGCGTGTTC
ATGTTGCGTTAGAGTGTAGGGTCAGGGTTAGGGTGATACATTTCTTCCAC
TGTGTCCCATCTGTGATGTGTGTTATGTAACATACGCTCTATGAGGGTTA
GAGAGTATGGATTACTGATTAGGTTTTTACTTCATTTGCATGTATTGCAG
AGTTTTGATGTACCGGTAGTTTTTTATTTATTTACATAGTTGTGATAACA
TAGTTGTGATAGACACTTCAACCCCTTCGAACCAAAACAGGGCAAGTTCC
GTGAGCTTGAGGAAGAGGCAGCAGAAAAAGAAAGGGCGGCTAAGGAATCA
ACCAAGGGGGAGAAGTCCTCAGTAAAGGAGGCTACTGTGCCCAAACCTAC
CACGCCGAAGAGTGGTGCCGCACCATCTTCTCCATTTGCAGGGTTGACCT
CTATGTTTTCAGCAAGCCCAAAGCCAGTGGCCAAAGAGGCAGCAGAGGTT
CCACGCCCCAAAACAACACCCCCCCCTCCCAAGGTTACAAAGGTCAAGAC
ACTGAAGGTTACCTCTGCCCCTGCCCCTGCCCCTGCCTCTGTCCCATCAC
CCTCTTTAGCTTCCACTCCAACCCCTTCGTCTGAGGGCCCAGGATTCTGG
GAGTCCATGTTTGGCACTCCCGTGGATGATGGTGATGTGAACACGCTGCC
TGAGAAGGTCGATAGCGCACGGTCCATGCCAGTGTTTACCCCGCCCCCAG
CACCAGCCAAGGCCCCGGTGAAGGCCTCTGTTAAGGGAGAGGAGAAGAAG
ACGTCTACTCGTGCCCCCTCTCCTGAGGAGAAAAAAGCTGCGCCTGCATC
GACTTTGTTTGGCATGTTTGGGGGGAGTTCTCAGGCAACGAAGGAGGTAC
CCCCCCCAGCAGCCAAGCCAAAGGTTGCTCCGGCTTCAACTCCGGAGCCC
AAGGCTGCCCCATCCAAGGGTGGCGCTGCACCATCTTCTCCATTGGCAGG
TTTGACCTCCATGTTTTCAATGAGCCCTAAGCCAGCAGCCAAAAAGGAAG
TGGAAGTTCCTCCTTCAAAAGCAACCACCCCCACCCCAACCAAGGTTGCA
AAGGCCAAGACTTTAAAGGTTACCTCGGCCCCTGCCCCAGCACCTGTGTC
TTCCCCTCCCACACCTATGTCTAAGGGTCCAGGATTCTGGGAGTCCATGT
TTGCACCCCCAGTGGATGATGAAGAAGTCAACACCTTGCCTGAAAAGGTT
GATGGTGCCCGGGCCATGCCAGTGTTTGCCCCACCCCCTGCCCCAGCTAA
GGCTCCAGCAGCTAAAAAGGTGTCTGCTCCTCCTGCCCCTGCCCCCAAGG
AGAAGAAGGCAGCGCCAGCGCCATCGATGTTCAGCATGCTGGGAACAAAT
GTTTCTCAAAAGAGTTCACCTACCCCGTCTAAAGCTGACACTCAACCAGT
CACTCCGCCTCCCAAGACCGCTGCAAATAAGGCACCTCCTGCTGGAGGGT
TCAACTTGTTTGGAGGTATGTCTGCGAAGAAAACTGCTCCTGCCCCTGCC
CCTGCCCCTGCCCCTGCTCCTGTTGTGGAGGAGAAGAAAAGCTCATCATT
CATGGACAAGCTCTTTACTACGTCCAAGCCGGCCCCAAGTCTAGCCCCAG
AGGTTGAGCCTGTGGCAAAGCCATCCCCTGCACCATCAAACCCTTTTGGT
GGTCTCTTTGGTTCTGCAGGATCCTCTCCTAAAAGGACAGCAGCAGCAGC
AGCCAAGCCCAAGCCCAAGCCCAAGCCCAAGCCCAAGCCCAAGCCTAAAC
CCAAGCCCAAGCCTGCTGCTCCTGTTTCTCCTCAACCAGTGCCGGTGGTG
TCTCGTGTAAAGACTATGGATGATAGCTTCCTTCGCAAGGTTTCCATCAT
GCTTAAGCGCAACCAGGTACTCTTTGAAGTGGAAGGCGTTTGTTGTTGAG
GGAAAGGCGTGCTCAAGGGTTGATTGGAAGACGTTTCAAACAGTGTTACC
CCAACCTTTATGCCATTGCAGGAGCTACAACTTGATGCTCTAACAGGTTT
CTCTTCAAGAAATTGACGGGCTGTGATGGTGTTGTAGTTTTTCATGCTGT
TTGGGTTTGATGTTGCTCACAGTTTCAGATGGGAAAATGACCTGGAGTAC
TGATATTAATCAGTCTCTTAGTTGTTCTTATCCCAGGCATTGACATCGAA
TATTTGATTACAGTTACCACTGATTTTTGAAATACATCACCATGTCTAGC
GAATATCACCGCTTATTTTAGGTACACGGCCACTTGCCACATTATTACTG
GCAAGGGATCTCGTCAGTCTTTCCTCTCTAAAGATGGCCGAACCTCTATC
TCTCTCCGTTGTACTCTCTCTCTCTTCCCTAGTGTTGGGTCTGTCTGGGG
CATACATTTTCAACCTCTTGACTGCCTGCCTCCCTTTATTTTTATTTTTT
TAAACTTGAAAAAAAATTAAATGTGCTTGATAGGTGAAGATCAAGAAGTT
CCAGCAGCTCACTGACCGATTCCGAGGGGGTCTGATTAATGCAAAGGGGT
ACTACGAACAGGTGGAGGAACTCTTTGGAGAGGCAAACGTTGAGGTGAGC
AATCAGAAATGACCCCTTCTCGTACCGTACACGCAGGCACCCCTAGGATG
AAGTGGTAAGGGTATGGGCTAGGTGCTTGCTTTGAGGTGAGGTCGCAGGT
GGAATATTTTTATATTTTTTCTGTTTCTTGGTGGGGAGGGGGGGAGGCAT
GTGCTTCACATGGTCTTGGCCGAAATCGCACTGGATTATTGTTTTTTTTT
TTTGTATTTGCAGGAACTGCTTTTAAAAACCCCCCAAGGTGGACTGTTTC
GAGGCAATGTATCAGTCAAATGTTTTGTTCTCATTGGAGCATGGGGTACA
CTATGTCTATGTGTGTGCTTTTGTGATCTCCATTCTGGGCTAACTTGAGG
AAAGGGAGGTGTTTTTTTTTGCCTCTGGTAATTGCATGTTCCAGTATGAA
GCCAACAACGCCTTTGCACGATTTTCTTGTTGATAGCAGTGCTTTAAATT
GTGTTTCGGTTTAAGTAGGCGGTACAGTATTTCCATGACAAAAAGTGTTG
AGAACATTTCTGGAATTGCTTGTACTGTTAGAGGGTAAATTGCACTATGT
CATACTGCTCCCCTACCAAACTGTAGATTTCCAAGTCAGCAGAGTGCAGT
ACATTTGTGAGTTTGTTGGCAGGCTGCCTGAAGAAGGCCCGTATTAAACG
TGTTGATGGGTGGTGCTTGTCCTGAGGAACACGGTAACGGAGTTTAGCCT
TGCCATTTCATTGGTGCACTGTCCTTCTCGTGTTGGTTCCCTTGACCGGA
CACTAGCTACCATCTCCGTGACAATATTTCTATCACACTGTATTGAAAGT
ACTGGGACTTTTTTTTTCATGCACAAGCTGGAGGAAGTTGCAATTGGAAT
GGTCTGTACAACCACCACCTATACACACTTTTGATGGCAATTGAGACAGT
TCTTGAGACAGTTCTTGAGACAGTTCTTGAGACAGTTCTCCCCTCCTGCC
TCCCTTCGGTCCCCTGTAGCAAATCACTGGGCCTCTCCTGGGGGCGCTGC
CTGAGAAAGACAAGCGCAAAACCCTTCAGGATGCCATCAAAAAGGCTCAG
AAGAATAAGTTAGCGGCCACCGCTACTGCCGGGGGGGGAGGGGAAGGGGA
AGGGGAAGGGGAAGGAGGCTTTAACCTCTTTGGCTGGGGGAAGAAGGAAC
CTGCAAGTGCACAGTCAACCCCTGCCCCTGTGGTTGCAAAGAAGGGCAGT
GTGAAAGGGGCTAGCAGTGCAGGGTCAGATCCGTTTGCAGCAGTGTATTC
AAAGCTCTCTGGTGCAAACTTGGCACTGTTCAAGGCACGTACTGACCTTT
ACCTGAGGGGGGGTATCAATGCAAGGTGAGGAATGATGCGGGGCAGATGT
TGATTGTTGCCTTGTCTTATCTTGTCTTCTACTCTGCCTCTGCAAGGGAC
GGGTGAGGGTGGAGCTGATTGTTGAAGCTAAATGAGTGTGGCCTTTTTCT
CGTACACTGTGGTACTGTGTGTGTCTGTAGGTACTGTATGTGTCTGTAGT
TGTGTGGGTGTTGTACTGATGGCAGTAGTTGTTCTGATGTTGGTACTGGG
TGTTTCAATAGGACCAGTTATGTTGTACTGATGTTGCTTGGTGGTGTACC
GATGTCACTATCTATTGTACTGGCTAGGGAGGGCCTATGGTGACAACTCA
ATTGTTATTCCATGTATTCCGATTCGAATTTCAACTCACTACGCTTGTAA
TTGAACACCATGGATAAAACTAACAGCTTTTTTCATCCTCAAAGAGCTTA
GAGCTCCCCAATGTAACCCATCCTTTTATACTATTACTACTATGTTTGCA
CACTACTCTATTCACAGGAGAAGCAGAAAGAGTGGGGGTGGGGGTAATTT
TGGGTGCTGGCACTAATAACTTAGTATGAGGTAGAGACTAGGCGGAAAAT
TACAGTGTTGAGGTCTAGCCAATTATTTTTGTTTTGATCCCCTGACATGG
TCAATAGGTAGGTTGTTTTACTTTGTTTTCAATGTGGGAAGACCCAAAAT
CTCAAAGGTTCATTTTGCTTGCGATGGCGTGAGTGCTCGTTTTTTTTTTC
AGGGCAGTATCACTGACCCGCAGACAAGGGTTAGTAATAGTTGGTGTTCC
TGAGAGGACAGACTGTAGTTGAGACTTTGTACACTCTCTTATCTGACTGG
TGTATGCTGTCGATGGCCGTAGCCCTTGAAGAGTTTGTCTGGAGTATGTG
AATGCCAGAATTTGAAAGACCCTAACCCTAACCCTAACCCTAACCCAAGT
CATCTCAAGATCAAAAGAGCTCATGCTGCGCTGGTAAGTGTTTCCAATTC
CGAAATAGAGCACACTGTACTTGTTCCCACCTCCTCGTTGTTATTGAAAT
CTGAGCCTTTTTTGGTCTGTTTTTCCCGATTGAATTAACACATTGCAAAA
TACACGCACACAGACACCACCCCCCAACTGGCGTATCGCAGGCGTGATGA
TCGATGATTGATGTAGAGGATGTTGTTGGCACATCTCGTAAGGGTTAGGG
TTTCATTTATTTTATTTTGTACGGCACGGTGTTGGCACTTTTCATGCTTG
TGTGTGCGCATGGGCTTAGATTTCTTTTATTTGTGTTGCAAGAAATTGTA
CTCTCATGTTGGTGTCGCTCGACAAATGTCTGCAGGGCATCTTTTGGACC
ATGCACACACCTCTACTACATCTTGTAGACCAAATTTTGAATAGCGAATG
GGGTGATTTGTTTCTGTGTGAATGTATTGCAGCAAGTCGCATTGGCCGGT
CAGATTGTATCGACGACGGAATGGTAAGGTCTATTCACTTTGACCTGCGC
TAGGGTTGTTCTTGACGGATTGCTGGCATCGAAATGTCCAACAGGGTCTA
CCCTTCACAAAGAACCCATTGGTCGCTATCCTCGACTCTGAATCATCCTG
TGTTAGGATGTCATTTGTCACAATTGCTCCGAATATTGTTCTGAATGTTG
CGATGGCGGTTACGTGTTTTTCCTTTTTACACCATGCTGTTCCATGTTCC
TACTTCTTTGTTCCGAATCTTGCGAGGGAGTTGAAAAAAATAAACCAAAC
TGTGCAGCACCCATGTGCACGATAATTGAGGTGTGGAACAAATGATCGAC
CAAACGAAAGGATTTTGATGATACATTTTTTTTTTTGTAATTTGAGATTT
TGTATGTCAATTGACTCCATTGAATCGCCTTCGAATTGTAACACTGTACC
AACAACAAAGGCACCTTATTTCTTGTGTGAGAATTTTATTTTTATTTTAG
AGAATGATTGAAAATGATCTGCACTTGATCCAAGATTAACTTTTTCCTGG
AATATATATAAATATAAAAATATATTGTTTATTTTTATTTTTATTTTTCT
CATGTGTTGCATGTCCCAATACGTTTCCCTGTGATCAGGAATTATTATGA
TTCGCTGGAGCGTGTGTTTGGTAAGAGTAACATGGCGGCTGAAGTGCCAG
GGGTGCTCAAAGCCCTGCCGGCGAACAAGCGCTCTCTCCTCAACAGTGTG
TACACTGGACTCACCAATTAGAGGACAGAGTCAGATTTGGAAGAGGAAGG
GTATGGAGAGGTCAGGGGGGAGTGGGGGACTTGGTAGTCTTTTTAGGATT
GAACTGCCGGGAGGAAGTGATACTTTCTGCACTGCTTTTCTATTGCCATT
AGAATAGGGACTGCAGTTCTATACTGCACAAGTGTGGTGCAGTATTTATG
ACATCTGAATGGCGCGCTGCTTGTTGACTCTGGGAGGGGGGATAGGGTGT
AGTGTCCATGTGTGGCATACACTTCACAGTGTATCCGTATATTGATGGAA
GCATGGCACGTGGGGCTTTGTTCCCTGAGTTGTTTTGTAGTGTAGCCAAG
GTGTTGGACATGCTGTGAGATAGACTTTTTTTGTGCCCCAAGTTTGAATT
GGTTAGATCTTGGTTAGTAGGATTGCCTGAGGTTGTGTATTTTTGGTATA
GACTGCCTGTTTAGTGAAATCTAGATAGTCAGGTGCTGTTTGTGTAAGCT
CATTGTCTTACTGTGCCACCTTTGACACTTTGCCCTCTGTATGCAATGCC
TTGGTTTCGTGGGTCCATCATAGTGGTACCGCATGCATCCATACTCACAG
TTGACAATGAGTTGGGGAATATATTTTATCCCATTTTTGCGGATGACTGC
TGATGTGAGAGAGCACACTGTCCTGATGCTGATAGTTTGTAGGCACAGGA
AAGAATAAGAGAGTTGATGTGTGACGAGGTATTGACCTAGAGATCAAAGC
AAACCATTCTACTACGATCAATATTTTGCCTGTGTGGAAAACTGAGGAGG
CAAGAATACACCCATGGAAGTGAGATGGAGAAGAGGGGTACAGTCAAGTG
AAAGGTTGCAAGCTCTGAGATTGAGAGTGGGAGGTGGTGCAGGAGGTGAT
CCTCTGTGTTGCAGATGGGGAGCCGACAGGCATCCACATTGATTGCGATG
TGTGTGTGTGTGTGTGTGTGTGTTTGTGTCTCTCAATAGCTCTGGGTTGT
GGCAACAAGCTTGTTTATTCAAGAAATTAATGAAAATGAAAGATATTACC
TTGACTTTAAAGAAGAGCCAGGATATGTTGTGTGATGTTGTTATCTCTTT
TCTGGTGTCTTGATTATGTTGGATACAGTGTAAGTCAATTTACACAACAA
TACAACGTTTTGTGCCTTTCCGTCTTTGTGCCGTTTTGTACGGAATACCA
AGGTATTCGTTGGCAGCACCTGGTCGTATAGGGGACAGAGTGCATCATTA
TTCTCTGAGGGGAATCTTTCCGGTATTGTTGGGCTCTCAGGAAGCAACCT
CATACATGCATCATGTTCTGTATACATGCTTGTTTTCTATGGGAATTACG
GTTATGTATCAACCTTCGTAAC back to topCoding sequence (CDS) from alignment at C-tenellus_contig1103:1842..14313+ >mRNA_C-tenellus_contig1103.1.4 ID=mRNA_C-tenellus_contig1103.1.4|Name=mRNA_C-tenellus_contig1103.1.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=3378bp|location=Sequence derived from alignment at C-tenellus_contig1103:1842..14313+ (Choristocarpus tenellus KU2346)
ATGAAGCGACCCTTCACAACCTTTGGGGCGTTAGCCTTTATCAGCATCCA
GCTAGACACGGGCAAGGCATTTAAAGTTTCCTTAGGACCACAGCGACATA
CTGTTCCATACACCGGAAGAAACCATGGCATTGTCCCACCACCTAGCAAG
CCCGTGGCGTCTCAGCCAAGATTCGACTCGCAGACAATGGCTACTGGTGG
AGTGGAGACTGCTTCTAATGATGTTGATGCCCAGGACGAAACGGACATGA
AAATTCAGACCACTGTTGAAGAGAAGGGTGCAAGTATTGAGGAAGTTAAT
GAAGCCGAGGTCAATGTTGATACTATCACTACATCTGAGCCTGTGAGGTC
AGTGGAGAAGGATGCGGACTCGACGCCCAAGGTCGCACCTGTGCAACCGC
GGCGAAATGAGTTTGACTCAGTGGAGAAAGCACTAGAATATGTCAGGCAA
ATCAGTGCAGCAAATCTCGAACAGAAAAAGGTTGCTGAACTGGCAAAGAG
GTCGAAAGCTGTATCAGAAACTGAAACATCTGAACCACCTGTGACTGCAC
CGGAGTCTGCAAAGTCAGCACCGGCCAAGCCAGTAGCAGCCAGGCCGCCG
GCCTCTGAGGCATCCGTAGCTTCACCAGGTGATGTGCTCAAACCCACAAA
AGCTGTGTCAGCTCGCCCTGAAGGTGTAAAGGCAAAATCTGTTGCCCCAC
CATCCACCCCGGTAAAGAGAGAGGTTATCCCTCCAAAGGAAGCAGAGGTG
GTGAAGATTAAGACTCCGGATGAGGTCAAGACTACAGTGGGAGATGCTAA
GGGTGAGAGTGAGACTGAGTCTGCAGCTGAGCCTGCTGCTGAGCCTGCTG
CTGAGCCTGCTGCTAAGTCTACTGCTGAGCCTGCTGCTACTGAGGAGTCT
ACTTCCCAACTCAAGGCTGCAGCATCGATAACAGCCACCAAAAAAGAATC
GAAGGAGTCATCGCCATCCATGTTTGAAGGCTTGTTCAACATGGGCTCAG
ATTCCATCGAGGATTTCTTTGGGATCAAAGTGAAGTCTGTCCTGGTGGAC
ACCACCAAGCCACCTCCGAAGGAACAGCCCCTGCCCAACCTCGACTCTAA
GAAAGTGGATGCGCTTATTGAAGAGGATGGACTTACTGAGGTGACCCTCA
AGGGCAAGTTCCGTGAGCTTGAGGAAGAGGCAGCAGAAAAAGAAAGGGCG
GCTAAGGAATCAACCAAGGGGGAGAAGTCCTCAGTAAAGGAGGCTACTGT
GCCCAAACCTACCACGCCGAAGAGTGGTGCCGCACCATCTTCTCCATTTG
CAGGGTTGACCTCTATGTTTTCAGCAAGCCCAAAGCCAGTGGCCAAAGAG
GCAGCAGAGGTTCCACGCCCCAAAACAACACCCCCCCCTCCCAAGGTTAC
AAAGGTCAAGACACTGAAGGTTACCTCTGCCCCTGCCCCTGCCCCTGCCT
CTGTCCCATCACCCTCTTTAGCTTCCACTCCAACCCCTTCGTCTGAGGGC
CCAGGATTCTGGGAGTCCATGTTTGGCACTCCCGTGGATGATGGTGATGT
GAACACGCTGCCTGAGAAGGTCGATAGCGCACGGTCCATGCCAGTGTTTA
CCCCGCCCCCAGCACCAGCCAAGGCCCCGGTGAAGGCCTCTGTTAAGGGA
GAGGAGAAGAAGACGTCTACTCGTGCCCCCTCTCCTGAGGAGAAAAAAGC
TGCGCCTGCATCGACTTTGTTTGGCATGTTTGGGGGGAGTTCTCAGGCAA
CGAAGGAGGTACCCCCCCCAGCAGCCAAGCCAAAGGTTGCTCCGGCTTCA
ACTCCGGAGCCCAAGGCTGCCCCATCCAAGGGTGGCGCTGCACCATCTTC
TCCATTGGCAGGTTTGACCTCCATGTTTTCAATGAGCCCTAAGCCAGCAG
CCAAAAAGGAAGTGGAAGTTCCTCCTTCAAAAGCAACCACCCCCACCCCA
ACCAAGGTTGCAAAGGCCAAGACTTTAAAGGTTACCTCGGCCCCTGCCCC
AGCACCTGTGTCTTCCCCTCCCACACCTATGTCTAAGGGTCCAGGATTCT
GGGAGTCCATGTTTGCACCCCCAGTGGATGATGAAGAAGTCAACACCTTG
CCTGAAAAGGTTGATGGTGCCCGGGCCATGCCAGTGTTTGCCCCACCCCC
TGCCCCAGCTAAGGCTCCAGCAGCTAAAAAGGTGTCTGCTCCTCCTGCCC
CTGCCCCCAAGGAGAAGAAGGCAGCGCCAGCGCCATCGATGTTCAGCATG
CTGGGAACAAATGTTTCTCAAAAGAGTTCACCTACCCCGTCTAAAGCTGA
CACTCAACCAGTCACTCCGCCTCCCAAGACCGCTGCAAATAAGGCACCTC
CTGCTGGAGGGTTCAACTTGTTTGGAGGTATGTCTGCGAAGAAAACTGCT
CCTGCCCCTGCCCCTGCCCCTGCCCCTGCTCCTGTTGTGGAGGAGAAGAA
AAGCTCATCATTCATGGACAAGCTCTTTACTACGTCCAAGCCGGCCCCAA
GTCTAGCCCCAGAGGTTGAGCCTGTGGCAAAGCCATCCCCTGCACCATCA
AACCCTTTTGGTGGTCTCTTTGGTTCTGCAGGATCCTCTCCTAAAAGGAC
AGCAGCAGCAGCAGCCAAGCCCAAGCCCAAGCCCAAGCCCAAGCCCAAGC
CCAAGCCTAAACCCAAGCCCAAGCCTGCTGCTCCTGTTTCTCCTCAACCA
GTGCCGGTGGTGTCTCGTGTAAAGACTATGGATGATAGCTTCCTTCGCAA
GGTTTCCATCATGCTTAAGCGCAACCAGGTGAAGATCAAGAAGTTCCAGC
AGCTCACTGACCGATTCCGAGGGGGTCTGATTAATGCAAAGGGGTACTAC
GAACAGGTGGAGGAACTCTTTGGAGAGGCAAACGTTGAGCAAATCACTGG
GCCTCTCCTGGGGGCGCTGCCTGAGAAAGACAAGCGCAAAACCCTTCAGG
ATGCCATCAAAAAGGCTCAGAAGAATAAGTTAGCGGCCACCGCTACTGCC
GGGGGGGGAGGGGAAGGGGAAGGGGAAGGGGAAGGAGGCTTTAACCTCTT
TGGCTGGGGGAAGAAGGAACCTGCAAGTGCACAGTCAACCCCTGCCCCTG
TGGTTGCAAAGAAGGGCAGTGTGAAAGGGGCTAGCAGTGCAGGGTCAGAT
CCGTTTGCAGCAGTGTATTCAAAGCTCTCTGGTGCAAACTTGGCACTGTT
CAAGGCACGTACTGACCTTTACCTGAGGGGGGGTATCAATGCAAGGAATT
ATTATGATTCGCTGGAGCGTGTGTTTGGTAAGAGTAACATGGCGGCTGAA
GTGCCAGGGGTGCTCAAAGCCCTGCCGGCGAACAAGCGCTCTCTCCTCAA
CAGTGTGTACACTGGACTCACCAATTAG back to top
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