mRNA_C-tenellus_contig11014.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11014.1.1 vs. uniprot
Match: A0A6H5JLK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK7_9PHAE) HSP 1 Score: 224 bits (571), Expect = 5.370e-61 Identity = 156/348 (44.83%), Postives = 187/348 (53.74%), Query Frame = 2 Query: 278 RTAAAFWVLGLINNSGYVIMMAGAKKIAPGGVGLVFLADVLPSLVTKLTAPYWFHLVPYSWRVWICSTLMVLSFVTVGYGNSTGVQLLGVAFSSLQGGLGEASFLALAAFYDTATALTAWSSGTGFAGVFGYAWVFFFQFIVRTSFEATLLWACSLALALLYTFFQILGEPDRGSNFVGVGVGTGDVTGGDVGESESLGEGDVNQGIMENYVCTGKGGWEGKPGLFAIGEEAEQESGRDETKSSWLPLQTSSSRSSLYHRSGERNHPGGSMGGTHLGNGCGTNQNVVGELPRAPGVPEMASMGSDLGSTRQGQVPLQVVMTVRERLKFTLGLWPYTLPLAIVYFAEVS 1321 R AAFW+LGLINNS YVIMMA AK+IAP VG+VF ADV P++V K+TAPYWFHLVPYS RVW C+ L+VLS VTVGYG ST VQLLGV FSSLQ GLGE+SFLALA+FYDT ALTAWSSGTGFAG+FG SF ATL+ A L L LY +F++L P G+ G S SL N+ + P ++ G E SS ++ H S E + GG LG G G V +P A S R + MTV +RL FT+ LW +T+PL +VYFAE + Sbjct: 61 RNDAAFWLLGLINNSSYVIMMAVAKEIAPDAVGVVFFADVAPTMVIKVTAPYWFHLVPYSARVWACTMLLVLSLVTVGYGESTRVQLLGVCFSSLQAGLGESSFLALASFYDTPRALTAWSSGTGFAGIFGXXXXXXXXXXXXXSFRATLMMANLLGLVFLYAYFKLLSAPRSGTLRNG---------------SSSLQTRRGNRAAAPDTYSPIPSSQRSPPPSPSL--NGPSGGGGAELFSS-----------NIEHGSREED------GGWGLGEGRGGGALDVELVPTA--------------SVRAPE------MTVGQRLCFTISLWRFTVPLMLVYFAEYT 354
BLAST of mRNA_C-tenellus_contig11014.1.1 vs. uniprot
Match: W7TQX4_9STRA (Cln3like protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQX4_9STRA) HSP 1 Score: 194 bits (492), Expect = 3.710e-50 Identity = 99/168 (58.93%), Postives = 119/168 (70.83%), Query Frame = 2 Query: 287 AAFWVLGLINNSGYVIMMAGAKKIAPGGVGLVFLADVLPSLVTKLTAPYWFHLVPYSWRVWICSTLMVLSFVTVGYGNSTGVQLLGVAFSSLQGGLGEASFLALAAFYDTATALTAWSSGTGFAGVFGYAWVFFFQFIVRTSFEATLLWACSLALALLYTFFQILGEP 790 AAFW LGL+NN YVIM+AGAK+I GGVGLVFLADV P+ + KL+APYWFH V YS R +C LM S +TV G + VQL GV F SLQ G+GEAS L L A Y + +TAWSSGTGFAG+ GYAWV FF ++ SF ATL+ A L +A ++TFF LG+P Sbjct: 25 AAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDP 192
BLAST of mRNA_C-tenellus_contig11014.1.1 vs. uniprot
Match: A0A7S1JHF2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JHF2_9EUGL) HSP 1 Score: 184 bits (466), Expect = 2.540e-47 Identity = 97/175 (55.43%), Postives = 118/175 (67.43%), Query Frame = 2 Query: 278 RTAAAFWVLGLINNSGYVIMMAGAKKIAPGGVGLVFLADVLPSLVTKLTAPYWFHLVPYSWRVWICSTLMVLSFVTVGYGNST---GVQLLGVAFSSLQGGLGEASFLALAAFYDTATALTAWSSGTGFAGVFGYAWVFFFQFIVRTSFEATLLWACSLALALLYTFFQILGEPD 793 R AFW+LGL+NN+ YVIM+AGAK I P VGLV++ +VLP KLT PYWFH V Y RV+ S LM LSF+ V G T + L G+ F S QG LGEASF+AL+AFYD+ ALTAWSSGTGFAGVFGY WV FF + +FE +LL A SLA + + +L EP+ Sbjct: 7 RVLYAFWLLGLLNNTAYVIMIAGAKDILPSAVGLVYVCNVLPGFAIKLTGPYWFHYVRYKHRVYCASLLMGLSFLIVALGQITKNAALSLFGILFCSAQGSLGEASFVALSAFYDSRKALTAWSSGTGFAGVFGYLWVSFFTLFLGLNFETSLLLALSLAAGFVAVYIFVLPEPE 181
BLAST of mRNA_C-tenellus_contig11014.1.1 vs. uniprot
Match: A0A8K1CMG1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMG1_PYTOL) HSP 1 Score: 183 bits (464), Expect = 5.720e-47 Identity = 96/184 (52.17%), Postives = 125/184 (67.93%), Query Frame = 2 Query: 233 YEDSAEKQRQRRVAYRTAAAFWVLGLINNSGYVIMMAGAKKIAPGGVGLVFLADVLPSLVTKLTAPYWFHLVPYSWRVWICSTLMVLSFVTVGYG-NSTGVQLLGVAFSSLQGGLGEASFLALAAFYDTATALTAWSSGTGFAGVFGYAWVFFFQFIVRTSFEATLLWACSLALALLYTFFQIL 781 +++ A QR+ A R AFWVLG +NN GYVIM+AGA++IA GGVGLV+ D+ P+L+ KLT PYWFHL Y R ++ + M++SF+ V YG +S G+QLLGVAFS LQ G+ EASFLA+A+FYD LT WSSGTG AGV GYAWV F + SF TL+ A + ++ F +L Sbjct: 5 HDEDAPPQRE---ALRNLVAFWVLGFVNNIGYVIMIAGAQEIAAGGVGLVYFFDIFPALLVKLTGPYWFHLFSYRHRTYVAALWMLMSFIVVAYGTHSLGLQLLGVAFSGLQSGMMEASFLAMASFYDAQRCLTCWSSGTGLAGVGGYAWVAIFHLWLGLSFSTTLVLASIFPVLYVFIFTAVL 185
BLAST of mRNA_C-tenellus_contig11014.1.1 vs. uniprot
Match: A0A2D4CGQ9_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGQ9_PYTIN) HSP 1 Score: 180 bits (456), Expect = 5.770e-46 Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 2 Query: 254 QRQRRVAYRTAAAFWVLGLINNSGYVIMMAGAKKIAPGGVGLVFLADVLPSLVTKLTAPYWFHLVPYSWRVWICSTLMVLSFVTVGYG-NSTGVQLLGVAFSSLQGGLGEASFLALAAFYDTATALTAWSSGTGFAGVFGYAWVFFFQFIVRTSFEATLLWACSLALALLYTFFQIL 781 +R A R AFWVLG INN GYVIM+AGA++IA GGVGLV+ D+ P+L+ K+T PYWFHL+ Y R +I + M+LSF+ V +G +S QLLGVAFS LQ G+ EASFLALA+FY + LT WSSGTG AGV GYAWV F + SF ATLL AC L + F +L Sbjct: 13 ERNDSEALRNLLAFWVLGFINNIGYVIMIAGAQEIAAGGVGLVYFFDIFPALLVKVTGPYWFHLISYRHRTYIGALWMLLSFLVVAFGTHSLAWQLLGVAFSGLQSGMMEASFLALASFYQSRHCLTCWSSGTGLAGVGGYAWVAIFHLWLGLSFSATLLLACIFPLLYVIMFDVVL 189
BLAST of mRNA_C-tenellus_contig11014.1.1 vs. uniprot
Match: A0A5J4XD34_9CHLO (Golgi integral membrane protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XD34_9CHLO) HSP 1 Score: 175 bits (443), Expect = 1.590e-43 Identity = 128/351 (36.47%), Postives = 176/351 (50.14%), Query Frame = 2 Query: 290 AFWVLGLINNSGYVIMMAGAKKIAPGGVGLVFLADVLPSLVTKLTAPYWFHLVPYSWRVWICSTLMVLSFVTVGYGNSTGVQLLGVAFSSLQGGLGEASFLALAAFYDTATALTAWSSGTGFAGVFGYAWVFFFQFIVRTSFEATLLWACSLALALLYTFFQILGEPDRGSNFVGVGVGTGDVTGGDVGESESLGEGDVNQGIMENYVCTGKGGWEGKPGLFA----IGEEAEQESGRDETKSSWLPLQTSSSRSSLYHRSGERNHPGGSMGGTHLGNGCGTNQNVVGELPRAP---GVPEMASMGSDLGSTRQGQVPLQVVMTVRERLKFTLGLWPYTLPLAIVYFAEVS 1321 AFW+LGL+NNS YVIM+AGA I+ G VGLV+ V P+L+ KL+APYWFHL+ Y R+ + + +M S++TV YG QLLGV F++ QGGLGEAS LAL + YD+ ALT WSSGTGFAGV GY WV + +F TLL A ++A L+ + ++L P+ + ++ S S D+ QG + L A +G EAE + GR + +S R + + P G+ G T + + E P G E M +D + + M ERL T+ LWPY +PL VYFAE + Sbjct: 9 AFWLLGLLNNSVYVIMIAGANDISSGAVGLVYFCAVFPALLVKLSAPYWFHLISYDVRMTVVAVMMTGSYLTVAYGRHMSWQLLGVTFAAFQGGLGEASTLALCSLYDSRRALTLWSSGTGFAGVAGYTWVAVLHLWLGFTFRTTLLLANVTSVAWLFIYHKVLPPPNLEA-----------ISQLHTLTSRSESTSDLPQGTTASAADR----------LAADASLLGLEAESK-GRLSRRQKDAADSLASRRETAGSHNSPAWQPNGANGMTRRASWLDLDHAASSEQPSNAALLGDEERGRMSTDGDAATSSRQQRPEDMAWGERLVQTVKLWPYLVPLVAVYFAEYA 337
BLAST of mRNA_C-tenellus_contig11014.1.1 vs. uniprot
Match: A0A2P6TP97_CHLSO (Batten s disease Cln3 isoform B n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TP97_CHLSO) HSP 1 Score: 174 bits (441), Expect = 3.420e-43 Identity = 95/173 (54.91%), Postives = 114/173 (65.90%), Query Frame = 2 Query: 278 RTAAAFWVLGLINNSGYVIMMAGAKKIAPGGVGLVFLADVLPSLVTKLTAPYWFHLVPYSWRVWICSTLMVLSFVTVGYGNSTGVQLLGVAFSSLQGGLGEASFLALAAFYDTATALTAWSSGTGFAGVFGYAWVFFFQFIVRTSFEATLLWACSLALALLYTFFQILGEPDR 796 R AAFW+LGLINNS YVIM+AGA +I+ VGLV+LA V PSL+ K + PYWFHLV Y R+ + LM S+ TV +S G QLLGV +SLQ GLGEAS LAL + Y A+T WSSGTGFAGVFGYAWV F+ SF ATLL A + A L + +L P+ Sbjct: 13 RNLAAFWLLGLINNSAYVIMLAGANQISAAAVGLVYLAAVGPSLLCKASVPYWFHLVRYRTRMQAVALLMTASYTTVALSSSRGWQLLGVVLASLQSGLGEASCLALTSHYRGRAAITMWSSGTGFAGVFGYAWVLLLHFLAGLSFTATLLLANATCAAWLAVYHLLLEAPEE 185
BLAST of mRNA_C-tenellus_contig11014.1.1 vs. uniprot
Match: A0A2P6VN99_9CHLO (Battenin n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VN99_9CHLO) HSP 1 Score: 172 bits (437), Expect = 5.360e-43 Identity = 93/181 (51.38%), Postives = 123/181 (67.96%), Query Frame = 2 Query: 251 KQRQRRVAYRTAAAFWVLGLINNSGYVIMMAGAKKIAPGGVGLVFLADVLPSLVTKLTAPYWFHLVPYSWRVWICSTLMVLSFVTVGYGNSTGVQLLGVAFSSLQGGLGEASFLALAAFYDTATALTAWSSGTGFAGVFGYAWVFFFQFIVRTSFEATLLWACSLALALLYTFFQILGEPD 793 +Q +RR +T AA+W+LGL+NN+ YVIM+AGA +++ VGLV+L V P+++ K +APYWFHLV YS RV I + LM S+ TV ++ G QLLGV F+SLQGGLGEAS LA+ ++Y A++ WSSGTGFAGVFGYAWV + SF ATLL A A L + +L P+ Sbjct: 3 EQPERR---KTMAAWWLLGLLNNAAYVIMLAGANEVSAAAVGLVYLCAVAPAMLCKASAPYWFHLVRYSTRVHIVALLMSCSYTTVALSSARGWQLLGVVFASLQGGLGEASCLAMTSYYSGRPAISMWSSGTGFAGVFGYAWVALLHMLGGLSFRATLLLANVTTAAWLAVYHLLLDPPE 180
BLAST of mRNA_C-tenellus_contig11014.1.1 vs. uniprot
Match: A0A8J9RH41_9CHLO (Protein BTN1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RH41_9CHLO) HSP 1 Score: 172 bits (435), Expect = 9.560e-43 Identity = 85/165 (51.52%), Postives = 113/165 (68.48%), Query Frame = 2 Query: 287 AAFWVLGLINNSGYVIMMAGAKKIAPGGVGLVFLADVLPSLVTKLTAPYWFHLVPYSWRVWICSTLMVLSFVTVGYGNSTGVQLLGVAFSSLQGGLGEASFLALAAFYDTATALTAWSSGTGFAGVFGYAWVFFFQFIVRTSFEATLLWACSLALALLYTFFQIL 781 AAFW+LGLINN YVIM+AGA I+ G VGLV+ + P+L+ KLT PYWFH Y+ R+W+ + LM ++ TV + + +QLLGV FS+LQGGLGEAS LA+ F+D+ A+T WSSGTGFAGV GY WV ++ +F TLL A + A+ L +F +L Sbjct: 2 AAFWLLGLINNCAYVIMIAGANDISDGSVGLVYFCAIFPTLLVKLTCPYWFHYTSYNVRMWLIAILMGCAYTTVAFSSRRALQLLGVVFSALQGGLGEASCLAMCTFFDSRAAITFWSSGTGFAGVAGYTWVGLLHILLGFTFRTTLLIANATAVGWLLVYFMLL 166
BLAST of mRNA_C-tenellus_contig11014.1.1 vs. uniprot
Match: A0A812VNH4_SYMPI (BTN1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812VNH4_SYMPI) HSP 1 Score: 170 bits (430), Expect = 2.810e-42 Identity = 86/172 (50.00%), Postives = 114/172 (66.28%), Query Frame = 2 Query: 275 YRTAAAFWVLGLINNSGYVIMMAGAKKIAPGGVGLVFLADVLPSLVTKLTAPYWFHLVPYSWRVWICSTLMVLSFVTVGYGNSTGVQLLGVAFSSLQGGLGEASFLALAAFYDTATALTAWSSGTGFAGVFGYAWVFFFQFIVRTSFEATLLWACSLALALLYTFFQILGEP 790 Y AFW+LGL+NN +V++ AGA +I GV LV+L +VLPSL KL+ PYWFH V Y +R+W+ + LMVL + V +GN +L+GVA +S G+GEAS LA+A+FY+T LTAWSSGTGFAG+ GY W FF F+ F+ L+ A L +A L F +LG P Sbjct: 8 YGNVIAFWILGLLNNFLWVVLNAGANEINSAGVALVYLVNVLPSLTMKLSGPYWFHHVSYKYRIWLIALLMVLCLIQVAWGNGPYQKLIGVALASFAAGMGEASLLAMASFYETKPCLTAWSSGTGFAGIAGYVWSLFFDFL-DVCFQVELMVAMWLPVAFLLAFHCLLGPP 178 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11014.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11014.1.1 >prot_C-tenellus_contig11014.1.1 ID=prot_C-tenellus_contig11014.1.1|Name=mRNA_C-tenellus_contig11014.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=433bp MSPVEYNSLKSSIDPSPKDNLTVEGTPVSGIGKPMQITNVAQPLLLNVQDback to top mRNA from alignment at C-tenellus_contig11014:66..3033- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11014.1.1 ID=mRNA_C-tenellus_contig11014.1.1|Name=mRNA_C-tenellus_contig11014.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2968bp|location=Sequence derived from alignment at C-tenellus_contig11014:66..3033- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11014:66..3033- >mRNA_C-tenellus_contig11014.1.1 ID=mRNA_C-tenellus_contig11014.1.1|Name=mRNA_C-tenellus_contig11014.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1299bp|location=Sequence derived from alignment at C-tenellus_contig11014:66..3033- (Choristocarpus tenellus KU2346)back to top |