mRNA_C-tenellus_contig11009.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11009.1.1 vs. uniprot
Match: A0A7C3DIG0_9BACT (ATP-binding cassette domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C3DIG0_9BACT) HSP 1 Score: 110 bits (276), Expect = 3.190e-29 Identity = 52/95 (54.74%), Postives = 72/95 (75.79%), Query Frame = 1 Query: 25 DRQVGDRGESLSGGQRQRLVLARAVLADPAILILDEATSALDMEGEMTVQRSVLDFMQGRTCFIITHHINMLRVTDRVVVIGEGKVVQNGTFDEL 309 D +GDRG LSGG+RQRL +ARA+L +P ILILDEATSALD E E+ VQ+++ ++GRT F+I H ++ +R DR+VV+ EG++V+ G DEL Sbjct: 1 DTVIGDRGVRLSGGERQRLAIARAILRNPPILILDEATSALDTESEIMVQQAIERLLEGRTSFVIAHRLSTVRNADRIVVLQEGRIVEEGRHDEL 95
BLAST of mRNA_C-tenellus_contig11009.1.1 vs. uniprot
Match: UPI001BA7B817 (ATP-binding cassette domain-containing protein n=1 Tax=Leptolyngbya sp. 15MV TaxID=2819933 RepID=UPI001BA7B817) HSP 1 Score: 114 bits (284), Expect = 7.990e-29 Identity = 54/103 (52.43%), Postives = 74/103 (71.84%), Query Frame = 1 Query: 1 IHSRQQTLDRQVGDRGESLSGGQRQRLVLARAVLADPAILILDEATSALDMEGEMTVQRSVLDFMQGRTCFIITHHINMLRVTDRVVVIGEGKVVQNGTFDEL 309 I ++ D +G+RG LSGGQ+QRL +ARA+LADP ILILDEATS LD E E +QRS+ M+GRTCF+I H ++ +R D +VVI G++++ GT D+L Sbjct: 118 IEKLERGYDTLIGERGVRLSGGQKQRLAIARALLADPKILILDEATSNLDTESERLIQRSLARLMKGRTCFVIAHRLSTIRHADLIVVIENGRIIEQGTHDQL 220
BLAST of mRNA_C-tenellus_contig11009.1.1 vs. uniprot
Match: A0A849ELU1_9FLAO (ATP-binding cassette domain-containing protein n=1 Tax=Eudoraea sp. TaxID=1979955 RepID=A0A849ELU1_9FLAO) HSP 1 Score: 109 bits (272), Expect = 1.580e-28 Identity = 51/96 (53.12%), Postives = 72/96 (75.00%), Query Frame = 1 Query: 22 LDRQVGDRGESLSGGQRQRLVLARAVLADPAILILDEATSALDMEGEMTVQRSVLDFMQGRTCFIITHHINMLRVTDRVVVIGEGKVVQNGTFDEL 309 LD +G+RG LSGGQRQR+ +ARA+LADP +LILDEATS LD E E +Q+S+ +GRT F+I H ++ +R D+++VI EG++V++G DEL Sbjct: 13 LDTLIGERGIKLSGGQRQRIAIARAILADPRVLILDEATSNLDTESEGLIQQSLAALTKGRTTFVIAHRLSTIRRADQILVIEEGRIVEHGKHDEL 108
BLAST of mRNA_C-tenellus_contig11009.1.1 vs. uniprot
Match: A0A257UDR0_9BACT (ABC transporter domain-containing protein n=1 Tax=Planctomycetia bacterium 21-64-5 TaxID=1970542 RepID=A0A257UDR0_9BACT) HSP 1 Score: 112 bits (280), Expect = 2.060e-28 Identity = 56/103 (54.37%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 16 QTLDRQVGDRGESLSGGQRQRLVLARAVLADPAILILDEATSALDMEGEMTVQRSVLDFMQGRTCFIITHHINMLRVTDRVVVIGEGKVVQNGTFDELQGITG 324 Q D +G+RG LSGGQRQRL +ARAVLADP ILILDEATS LD E E +Q S+ ++GRT F+I H ++ + DR+VVI G++V+ GT DEL +G Sbjct: 97 QGYDTLIGERGVKLSGGQRQRLAIARAVLADPRILILDEATSNLDTESERLIQHSLARLLEGRTSFVIAHRLSTVVHADRIVVIEAGRIVETGTHDELMAASG 199
BLAST of mRNA_C-tenellus_contig11009.1.1 vs. uniprot
Match: A0A354P2U8_9PLAN (ABC transporter ATP-binding protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A354P2U8_9PLAN) HSP 1 Score: 111 bits (277), Expect = 3.610e-28 Identity = 51/92 (55.43%), Postives = 71/92 (77.17%), Query Frame = 1 Query: 34 VGDRGESLSGGQRQRLVLARAVLADPAILILDEATSALDMEGEMTVQRSVLDFMQGRTCFIITHHINMLRVTDRVVVIGEGKVVQNGTFDEL 309 +G+RG LSGGQRQR+ +ARA+LADP ILILDEATS LD E E +Q+S+ + ++GRT F+I H ++ +R D++VVI +G++VQ GT D L Sbjct: 107 IGERGFKLSGGQRQRIAIARAILADPKILILDEATSNLDSESERLIQQSLSELLRGRTAFVIAHRLSTIRGADKIVVIDDGRIVQVGTHDAL 198
BLAST of mRNA_C-tenellus_contig11009.1.1 vs. uniprot
Match: A0A5C6FQ43_9PLAN (Putative multidrug export ATP-binding/permease protein n=4 Tax=Crateriforma TaxID=2714592 RepID=A0A5C6FQ43_9PLAN) HSP 1 Score: 116 bits (291), Expect = 4.870e-28 Identity = 55/103 (53.40%), Postives = 75/103 (72.82%), Query Frame = 1 Query: 1 IHSRQQTLDRQVGDRGESLSGGQRQRLVLARAVLADPAILILDEATSALDMEGEMTVQRSVLDFMQGRTCFIITHHINMLRVTDRVVVIGEGKVVQNGTFDEL 309 I S D +G+RG LSGGQRQRL +ARA+LADP ILILDEATS LD E E +Q S++D + GRT F+I H ++ +R DR+VV+ +G++V++G+ DEL Sbjct: 528 IRSLPDGYDTMIGERGVKLSGGQRQRLAIARAILADPQILILDEATSNLDSESEQLIQASLVDLLAGRTAFVIAHRLSTIRNADRIVVLEDGRIVESGSHDEL 630
BLAST of mRNA_C-tenellus_contig11009.1.1 vs. uniprot
Match: A0A2W4P270_9BACT (ABC transporter permease (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2W4P270_9BACT) HSP 1 Score: 112 bits (279), Expect = 5.060e-28 Identity = 52/99 (52.53%), Postives = 74/99 (74.75%), Query Frame = 1 Query: 13 QQTLDRQVGDRGESLSGGQRQRLVLARAVLADPAILILDEATSALDMEGEMTVQRSVLDFMQGRTCFIITHHINMLRVTDRVVVIGEGKVVQNGTFDEL 309 +Q LD +G+RG LSGGQRQR+ +ARA+LA+P ILILDEATS LD E E +Q+S+ M+GRT F+I H ++ +R D+++VI +G++ + GT DEL Sbjct: 151 EQGLDTVIGERGVKLSGGQRQRIAIARAILANPRILILDEATSNLDTESESFIQKSLSTLMKGRTTFVIAHRLSTIRQADQILVIEQGRIAERGTHDEL 249
BLAST of mRNA_C-tenellus_contig11009.1.1 vs. uniprot
Match: A0A7K0EBQ3_9FLAO (ATP-binding cassette domain-containing protein n=1 Tax=Kriegella sp. EG-1 TaxID=2664451 RepID=A0A7K0EBQ3_9FLAO) HSP 1 Score: 116 bits (290), Expect = 5.380e-28 Identity = 55/101 (54.46%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 22 LDRQVGDRGESLSGGQRQRLVLARAVLADPAILILDEATSALDMEGEMTVQRSVLDFMQGRTCFIITHHINMLRVTDRVVVIGEGKVVQNGTFDELQGITG 324 LD +G+RG LSGGQRQR+ +ARAVLADP ILILDEATS LD E E +Q+S+ + +GRT F+I H ++ +R D+++VI +GK+ + GT DEL I G Sbjct: 466 LDTLIGERGVKLSGGQRQRIAIARAVLADPKILILDEATSNLDTESEALIQKSLAELTKGRTTFVIAHRLSTIRKADKILVIEDGKIAERGTHDELISING 566
BLAST of mRNA_C-tenellus_contig11009.1.1 vs. uniprot
Match: A0A7K2MRL9_9ACTN (ATP-binding cassette domain-containing protein n=1 Tax=Streptomyces sp. SID6013 TaxID=2690317 RepID=A0A7K2MRL9_9ACTN) HSP 1 Score: 110 bits (274), Expect = 7.230e-28 Identity = 50/96 (52.08%), Postives = 72/96 (75.00%), Query Frame = 1 Query: 22 LDRQVGDRGESLSGGQRQRLVLARAVLADPAILILDEATSALDMEGEMTVQRSVLDFMQGRTCFIITHHINMLRVTDRVVVIGEGKVVQNGTFDEL 309 LD VG+ G LSGGQRQRL +ARA++ DP +LILDEATSALD E VQ+++ ++GRT F++ H ++ +R DR+VV+GEG++++ GT +EL Sbjct: 96 LDTLVGEHGARLSGGQRQRLAIARALIRDPRVLILDEATSALDTRSEALVQQALARLLRGRTTFVVAHRLSTVRGADRIVVMGEGRILETGTHEEL 191
BLAST of mRNA_C-tenellus_contig11009.1.1 vs. uniprot
Match: UPI001669E5D3 (ABC transporter ATP-binding protein/permease n=1 Tax=Alicyclobacillus cellulosilyticus TaxID=1003997 RepID=UPI001669E5D3) HSP 1 Score: 115 bits (289), Expect = 7.770e-28 Identity = 54/92 (58.70%), Postives = 75/92 (81.52%), Query Frame = 1 Query: 34 VGDRGESLSGGQRQRLVLARAVLADPAILILDEATSALDMEGEMTVQRSVLDFMQGRTCFIITHHINMLRVTDRVVVIGEGKVVQNGTFDEL 309 VG+RG LSGGQ+QR+ LARA+LADPAILILD+ATSA+DME E T+Q+++ + M+GRT F+I H I+ L+ D+++VI G++V+ GT DEL Sbjct: 463 VGERGLGLSGGQKQRIALARAILADPAILILDDATSAVDMETEYTIQQALQEVMRGRTTFVIAHRISTLKRADQILVIDGGRIVERGTHDEL 554 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11009.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11009.1.1 >prot_C-tenellus_contig11009.1.1 ID=prot_C-tenellus_contig11009.1.1|Name=mRNA_C-tenellus_contig11009.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=114bp IHSRQQTLDRQVGDRGESLSGGQRQRLVLARAVLADPAILILDEATSALDback to top mRNA from alignment at C-tenellus_contig11009:1375..2237- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11009.1.1 ID=mRNA_C-tenellus_contig11009.1.1|Name=mRNA_C-tenellus_contig11009.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=863bp|location=Sequence derived from alignment at C-tenellus_contig11009:1375..2237- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11009:1375..2237- >mRNA_C-tenellus_contig11009.1.1 ID=mRNA_C-tenellus_contig11009.1.1|Name=mRNA_C-tenellus_contig11009.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=342bp|location=Sequence derived from alignment at C-tenellus_contig11009:1375..2237- (Choristocarpus tenellus KU2346)back to top |