mRNA_C-tenellus_contig110.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig110.1.1 vs. uniprot
Match: A0A6H5JRP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRP2_9PHAE) HSP 1 Score: 192 bits (487), Expect = 5.570e-59 Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 1 Query: 1 YVHIPDWKIPLTKKGFQDSRVAGENIKEFIGDKPLFIYTSPYMRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVASKAERARFGRFYYR 300 YVH+PDWKIPLTKKGF + + AGE IKE+IGDKPLFIYTSPY+RTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIV SKAERARFGRFYYR Sbjct: 60 YVHVPDWKIPLTKKGFGEGQKAGEKIKEYIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYR 159
BLAST of mRNA_C-tenellus_contig110.1.1 vs. uniprot
Match: D7FZ54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ54_ECTSI) HSP 1 Score: 192 bits (487), Expect = 1.140e-58 Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 1 Query: 1 YVHIPDWKIPLTKKGFQDSRVAGENIKEFIGDKPLFIYTSPYMRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVASKAERARFGRFYYR 300 YVH+PDWKIPLTKKGF + + AGE IKE+IGDKPLFIYTSPY+RTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIV SKAERARFGRFYYR Sbjct: 138 YVHVPDWKIPLTKKGFGEGQKAGEKIKEYIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYR 237
BLAST of mRNA_C-tenellus_contig110.1.1 vs. uniprot
Match: A0A836CA23_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA23_9STRA) HSP 1 Score: 179 bits (453), Expect = 3.770e-53 Identity = 86/111 (77.48%), Postives = 95/111 (85.59%), Query Frame = 1 Query: 1 YVHIPDWKIPLTKKGFQDSRVAGEN-----------IKEFIGDKPLFIYTSPYMRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVASKAERARFGRFYYR 300 YVH+PDWKIPLTK+G++D+R+AG+ IKE +GDKPLFIYTSPY+RTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATI SK ERARFGRFYYR Sbjct: 101 YVHVPDWKIPLTKQGYRDARLAGQKXXXXXXXXXXKIKEHVGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYR 211
BLAST of mRNA_C-tenellus_contig110.1.1 vs. uniprot
Match: A0A7S1XZK9_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZK9_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.290e-40 Identity = 72/128 (56.25%), Postives = 88/128 (68.75%), Query Frame = 1 Query: 1 YVHIPDWKIPLTKKGFQDSRVAGENIKEFIGDKPLFIYTSPYMRTKQTLAG----------------------------MVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVASKAERARFGRFYYR 300 YV+ PDWKIPLTKKG++D+R+AG+ IKE +GD P++IYTSPY+RTKQTLAG MV A+DTN IVGVREEPRLTEQQFGNFQN+ + S+ +R RFGRFY+R Sbjct: 102 YVNTPDWKIPLTKKGWKDARLAGQQIKEIVGDSPIYIYTSPYLRTKQTLAGKGSPQPRSLPLSLAPLPLSSTRPPAPPGMVGAWDTNEIVGVREEPRLTEQQFGNFQNVTNVKESREQRTRFGRFYFR 229
BLAST of mRNA_C-tenellus_contig110.1.1 vs. uniprot
Match: A0A7S2SR22_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR22_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.440e-35 Identity = 58/100 (58.00%), Postives = 74/100 (74.00%), Query Frame = 1 Query: 1 YVHIPDWKIPLTKKGFQDSRVAGENIKEFIGDKPLFIYTSPYMRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVASKAERARFGRFYYR 300 Y+++PDW+I LT++G + ++ G I IG+ P+F YTSPY RTK+TL MV F+ + IVGVREEPRLTEQQFGNFQNL I K ER+ +GRFYYR Sbjct: 61 YINVPDWRISLTEEGKEQAKATGSKISHIIGEDPVFFYTSPYRRTKETLQSMVTEFEQSDIVGVREEPRLTEQQFGNFQNLDEIQICKVERSSYGRFYYR 160
BLAST of mRNA_C-tenellus_contig110.1.1 vs. uniprot
Match: A0A4D9D0Z6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0Z6_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.940e-33 Identity = 57/100 (57.00%), Postives = 74/100 (74.00%), Query Frame = 1 Query: 1 YVHIPDWKIPLTKKGFQDSRVAGENIKEFIGDKPLFIYTSPYMRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVASKAERARFGRFYYR 300 YV PDWK+PL+ G + +R G +K +GD+PL+IYTSPY RTKQTL+ ++E+F+ N VGVREEPR+TEQQFGNFQ + +K ER FGRFY+R Sbjct: 195 YVETPDWKVPLSPIGHEQARQTGRQLKALVGDEPLYIYTSPYRRTKQTLSNILESFEDNLKVGVREEPRITEQQFGNFQCQQLMQQAKKERCNFGRFYFR 294
BLAST of mRNA_C-tenellus_contig110.1.1 vs. uniprot
Match: A0A7S0SR39_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR39_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.470e-31 Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 1 Query: 1 YVHIPDWKIPLTKKGFQDSRVAGENIKEFIGDK-PLFIYTSPYMRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVASKAERARFGRFYYR 300 Y +PDWKIPLT+KG + + G+ IKE IG+ P+ +Y SPY+RTKQT A M++ N ++ VREEPRLTEQQFGNFQ ++ K ER +FGRFYYR Sbjct: 65 YCSMPDWKIPLTEKGKEQASNVGKKIKEIIGNNSPISVYLSPYIRTKQTFALMIKELSNNNVITVREEPRLTEQQFGNFQKAEDMIRYKKERGQFGRFYYR 165
BLAST of mRNA_C-tenellus_contig110.1.1 vs. uniprot
Match: A0A7S2N3B8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N3B8_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.160e-30 Identity = 51/101 (50.50%), Postives = 72/101 (71.29%), Query Frame = 1 Query: 1 YVHIPDWKIPLTKKGFQDSRVAGENIKEFIGDKP-LFIYTSPYMRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVASKAERARFGRFYYR 300 YV PDW++PLT KG + AG+ +++ +G K F Y SPY+RT++TL + + D + IV +REEPR++EQQFGNFQN+ ++ +KAER FGRFYYR Sbjct: 8 YVKTPDWRVPLTSKGRSQASDAGKELRDLVGPKGCFFFYCSPYLRTRETLQEVTQHIDQDQIVSIREEPRISEQQFGNFQNVQEVLQAKAERHEFGRFYYR 108
BLAST of mRNA_C-tenellus_contig110.1.1 vs. uniprot
Match: L1IPB5_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IPB5_GUITC) HSP 1 Score: 112 bits (280), Expect = 5.220e-29 Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = 1 Query: 1 YVHIPDWKIPLTKKGFQDSRVAGENIKEFIGDKPLFIYTSPYMRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVASKAERARFGRFYYR 300 Y + DW+I LT++G Q +R AG +KE G +F Y SPY RT QT +++AF+ + G+REEPR+ EQQFGN QNL +I SK ER ++GRF+YR Sbjct: 17 YTRVSDWRISLTQRGRQQARAAGHKLKELAGASDVFFYYSPYYRTVQTCEEILQAFNPEQVRGMREEPRMAEQQFGNLQNLTSIKKSKDERHKYGRFFYR 116
BLAST of mRNA_C-tenellus_contig110.1.1 vs. uniprot
Match: A0A7S3QIR9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QIR9_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.820e-28 Identity = 50/100 (50.00%), Postives = 70/100 (70.00%), Query Frame = 1 Query: 1 YVHIPDWKIPLTKKGFQDSRVAGENIKEFIGDKPLFIYTSPYMRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVASKAERARFGRFYYR 300 YV PDWK+PLT++G Q S AG+ + + +GD +F Y SPY RT+ T+ +++ + + I+ REEPR++EQQFGNFQN+ + SK ER FGRFYYR Sbjct: 82 YVATPDWKVPLTERGRQQSFDAGKELADIVGDGQVFFYYSPYKRTRATVDELLKHINKSQIISTREEPRISEQQFGNFQNVEQVWESKKERHEFGRFYYR 181 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig110.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig110.1.1 >prot_C-tenellus_contig110.1.1 ID=prot_C-tenellus_contig110.1.1|Name=mRNA_C-tenellus_contig110.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=101bp YVHIPDWKIPLTKKGFQDSRVAGENIKEFIGDKPLFIYTSPYMRTKQTLAback to top mRNA from alignment at C-tenellus_contig110:783..1794- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig110.1.1 ID=mRNA_C-tenellus_contig110.1.1|Name=mRNA_C-tenellus_contig110.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1012bp|location=Sequence derived from alignment at C-tenellus_contig110:783..1794- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig110:783..1794- >mRNA_C-tenellus_contig110.1.1 ID=mRNA_C-tenellus_contig110.1.1|Name=mRNA_C-tenellus_contig110.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=303bp|location=Sequence derived from alignment at C-tenellus_contig110:783..1794- (Choristocarpus tenellus KU2346)back to top |