prot_C-tenellus_contig10954.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10954.1.1
Unique Nameprot_C-tenellus_contig10954.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length123
Homology
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BLAST of mRNA_C-tenellus_contig10954.1.1 vs. uniprot
Match: D8LFA4_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA4_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 5.650e-28
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0 
Query:   32 PVEYVAEFTRGGWIWRTSHRYRDWLALKDEIQTEFGTRHLPPKSLFPEKQNMGDILVNVIESCQGCRADCG-PLGLLEERRRGLQVSSKKFL 122
            P  Y   +TRGGWIWRTSHRY DWL+LK+ +Q +FG R+LP   LFP+K+++G I+V V+ SCQGCR   G  +G LEERRRGLQ    + L
Sbjct:   48 PTMYDVAYTRGGWIWRTSHRYSDWLSLKERLQADFGKRNLPDDELFPQKEDVGAIIVKVLSSCQGCREGGGRAVGHLEERRRGLQAYFSQVL 139
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BLAST of mRNA_C-tenellus_contig10954.1.1 vs. uniprot
Match: A0A6H5KH88_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH88_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 3.090e-26
Identity = 51/107 (47.66%), Postives = 72/107 (67.29%), Query Frame = 0 
Query:   17 SATLRVTDYITSAQRPVEYVAEFTRGGWIWRTSHRYRDWLALKDEIQTEFGTRHLPPKSLFPEKQNMGDILVNVIESCQGCR-ADCGPLGLLEERRRGLQVSSKKFL 122
            +AT    + + ++  P  Y A +TRGGWIWRTSHRY DWL+LK+ ++ +FG R+LP   LFP+K+++G I+  V+ SCQGCR      +G +EERRRGLQ    + L
Sbjct:   40 AATEPRPNLLATSAGPTMYEAVYTRGGWIWRTSHRYSDWLSLKERLRADFGKRNLPDDELFPQKEDVGAIIGKVLSSCQGCREGGSRAVGHIEERRRGLQAYFSQVL 146
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10954.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFA4_ECTSI5.650e-2856.52PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KH88_9PHAE3.090e-2647.66PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 6..121
e-value: 2.9E-8
score: 35.3
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 22..115
NoneNo IPR availableCDDcd06093PX_domaincoord: 19..115
e-value: 5.6426E-5
score: 37.7223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10954contigC-tenellus_contig10954:2935..4503 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10954.1.1mRNA_C-tenellus_contig10954.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10954 2489..5327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10954.1.1 ID=prot_C-tenellus_contig10954.1.1|Name=mRNA_C-tenellus_contig10954.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=123bp
MKAKGEKAEEKAKVMTSATLRVTDYITSAQRPVEYVAEFTRGGWIWRTSH
RYRDWLALKDEIQTEFGTRHLPPKSLFPEKQNMGDILVNVIESCQGCRAD
CGPLGLLEERRRGLQVSSKKFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf