prot_C-tenellus_contig10803.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10803.1.1
Unique Nameprot_C-tenellus_contig10803.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length103
Homology
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BLAST of mRNA_C-tenellus_contig10803.1.1 vs. uniprot
Match: A0A7S1V082_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V082_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.210e-7
Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 0 
Query:    7 LVAMALFAISAE-AFVGSPVRVNSRTPALFSRLSMSKDQHPEIEVAEKAALEATKKFGVSSKEAQLAWDFYEEVAAQDNSVATLPPLDDSCDV 98
            ++ +ALFA  A   F  +P  +  +   + + L  ++   P+  V  + AL+AT  +G+ S EA++AWD  EE  A DNSVATLP +D+ C V
Sbjct:    6 IITLALFATKATLGFTTAPAFLIKQQQVMTTALQATR---PDTAVLVEDALKATAAYGIESAEARVAWDIVEEADASDNSVATLPSMDEECSV 95
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10803.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S1V082_9STRA1.210e-737.63Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..103
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10803contigC-tenellus_contig10803:4502..5431 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10803.1.1mRNA_C-tenellus_contig10803.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10803 4499..5431 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10803.1.1 ID=prot_C-tenellus_contig10803.1.1|Name=mRNA_C-tenellus_contig10803.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=103bp
MFARCVLVAMALFAISAEAFVGSPVRVNSRTPALFSRLSMSKDQHPEIEV
AEKAALEATKKFGVSSKEAQLAWDFYEEVAAQDNSVATLPPLDDSCDVSG
HSM
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