mRNA_C-tenellus_contig1079.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1079.5.1 vs. uniprot
Match: D7FWP9_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP9_ECTSI) HSP 1 Score: 519 bits (1337), Expect = 1.080e-165 Identity = 254/441 (57.60%), Postives = 323/441 (73.24%), Query Frame = 1 Query: 1 MIDPLRYRSLASQIEFDEVQSPLQCWQCVQRGDVSPAFFLCHDCGKVGSARPYCQPCFFNYHARKR-GKHEHKPHPIVGGEPVVVQTLEEGNGLTFSKMHEWVTLEYSLTTHDTPCKQD-----KQPLTFQSGCSGPCVHFQLLGCTDLGAADILGYSDPYCAVYWKDALVGVTTTKYMTLNPKWTNQTFILPMSENFQVALRD-ENIPLLFNDRAALPKLRIDVYDWDSLSKNDFLGRVLVSDADILSILRRARHDKTCEEERLSFPLGAKQSSGKLGLRVALHESKLLVHVVQGEDLPIADPFSLSDPYCKVYWNNEHIGSTEHINDTLCPSWDTEVFEVDIGPDGLKSVEQSRLRVECLDWDRIGSHDLLGQVELDGPQLLQLIESNGSNSLDGLLDENGKELGEVDINKIQNFIRKLKKSDVQGKGETDDMIVGVPQ 1302 MIDPLRYRSL Q+EFDE SP+QC QC++ G +PAFFLC++CG G RP+C+PCFF+YH KR GK HKPHPIV G+PV VQTL +G+G+TF+KMH+WVTL+Y LTT ++ + KQPLTFQSGCSGPC+H QL GCT + AADI+G SDPYCAVYWK+ VG TTTK+MTLNPKW NQTF+LP++ F AL E LFN A LPKLRI++YDWD LSKNDFLG++ +SDA+IL ILR+ R + E + +SF L KQS G+LG+RVAL SKL VH+++ E++P ADPFSLSDPYC+V+WN+E +G T +INDTL P WD E+F + DG SVE+S LRV CLDWD+ GS+D+LGQ+EL G Q+ QL+ES D D + +GE D+ KI F++ +++++ G MIVGVPQ Sbjct: 1 MIDPLRYRSLEEQLEFDEDNSPMQCKQCLRGGVSTPAFFLCYECGNTGDPRPFCEPCFFDYHLTKRKGKEGHKPHPIVQGDPVTVQTLADGDGVTFAKMHDWVTLDYILTTDESDVAVEDTFLAKQPLTFQSGCSGPCIHLQLRGCTGIAAADIMGASDPYCAVYWKNNFVGATTTKHMTLNPKWANQTFVLPLAAEFLAALDGGEGSSALFNAGALLPKLRIELYDWDRLSKNDFLGQISLSDAEILPILRQIRSGEADENQAISFDLKPKQSRGQLGIRVALLGSKLYVHIMEAENVPKADPFSLSDPYCEVFWNDELVGKTAYINDTLDPVWDLEIFAFKVDKDGPNSVEKSTLRVVCLDWDQFGSNDVLGQIELTGSQIKQLVESKDG---DEGADAGEQAMGEADMEKIFEFVQMFQENELDEAG-LGKMIVGVPQ 437
BLAST of mRNA_C-tenellus_contig1079.5.1 vs. uniprot
Match: A0A835YR07_9STRA (C2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR07_9STRA) HSP 1 Score: 269 bits (687), Expect = 4.240e-80 Identity = 124/246 (50.41%), Postives = 167/246 (67.89%), Query Frame = 1 Query: 1 MIDPLRYRSLASQIEFDEVQS--PLQCWQCVQRGDVSPAFFLCHDCGKVGSARPYCQPCFFNYHARKRGKHEHKPHPIVGGEPVVVQTLEEGNGLTFSKMHEWVTLEYSLTTHDTPCKQD-KQPLTFQSGCSGPCVHFQLLGCTDLGAADILGYSDPYCAVYWKDALVGVTTTKYMTLNPKWTNQTFILPMSENFQVALRDENIPLLFNDRAALPKLRIDVYDWDSLSKNDFLGRVLVSDADILSI 729 MI+PL +RS A Q++F+ + LQCW+C Q +PA + C +CG+ G RPYC+ CF +YH KRG+ HKP PIV + VVVQTL+EG+ +TF MH+WVT+ Y+L ++++P + K +FQSGCSGPC+H QLLGC L AAD+LG SDP+C +YW VG TT +Y T NP+W NQTF+LP+ F AL F D AALP+L +DV+DWD NDFLG++ +S AD+LS+ Sbjct: 1 MIEPLYHRSPAEQLQFEVIPDGDALQCWKCQQDKQNTPALYTCTNCGRNGVPRPYCKSCFDSYHLYKRGRAGHKPRPIVSEDAVVVQTLQEGDDVTFPAMHQWVTVHYTLRSNESPAVVERKDDFSFQSGCSGPCLHLQLLGCRGLPAADLLGASDPFCVIYWDGIRVGATTVRYFTTNPRWNNQTFVLPLEPAFIGALLGGEAEATFRDSAALPRLHVDVFDWDRFGGNDFLGQMQLSTADLLSL 246
BLAST of mRNA_C-tenellus_contig1079.5.1 vs. uniprot
Match: F0YL32_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL32_AURAN) HSP 1 Score: 167 bits (422), Expect = 1.870e-38 Identity = 122/413 (29.54%), Postives = 198/413 (47.94%), Query Frame = 1 Query: 58 QSPLQCWQCVQRGDVSPAFFLCHDCGKVGSARPYCQPCFFNYHARKRGKHEHKPHPIVGGEPVVVQTLEEGNGLTFSKMHEWVTLEYSL------TTHDTPCKQDKQPLTFQSGCSGPCVHFQLLGCTDLGAADILGYSDPYCAVYWKDALVGVTTTKYMTLNPKWTNQTFILPMSENFQVALRDENIPLLFNDRA------ALPKLRIDVYDWDSLSKNDFLGRVLVSDADILSILRRARHDKTCEEERLSFPLGAKQSSGKLGLRVA--LHESKLLVHVV----QGEDLPIADPFSLSDPYCKVYWNNEHIGSTEHINDTLCPSWDT-----EVFEV--------DIGPDGLK--------------SVEQSRLRVECLDWDRIGSHDLLGQVELDGPQLLQLIESNGSNS 1161 QS + C DV+ + + S R +C+ C+ Y K + + +V G+ VV QTLE G+ + + + V++ Y + D+ Q + + F+SGCSGPC+H Q+L + A IL DPYCAVYW++ VG T +P W+ +TF++P+ EN VA E L N R P LR+++YD++++ K+ F+G+V +S I+ +L T E +PL K +G + + + H + H+V + L AD FS SDPY +W+ + +G + I D P W+ VFEV D D L+ S+++ L +E D+DRIG H +LG++EL+G + QL++ + ++S Sbjct: 864 QSTMSFGWCRSVIDVARTQIRSRERSEKSSMRQFCEDCYEKY-KEKHKLSDKRERILVAGQGVVKQTLEHGDETHYPDVFDKVSILYEMRILGKTAVVDSTAMQGGRSIWFESGCSGPCLHVQILCANRVYQASILDVPDPYCAVYWENRFVGATQVIDGNTDPIWSGETFVVPL-EN-PVARWVERAALRGNKREHGNPKYVDPILRLEMYDYNTIFKDVFVGQVSLSPRQIVKVLA------TGGSEPRVYPLRPKMPTGTMRIAIGRTTHLKTGMTHIVIKVENCKKLARADTFSESDPYLAAFWDGQPLGESPVIYDCADPKWNECIFHFPVFEVSRVQLRDGDGTRDALRRSVSAPKSSQAMAQSLDRKTLLIEVRDYDRIGEHKILGEIELNGEAIAQLVKRSDASS 1267
BLAST of mRNA_C-tenellus_contig1079.5.1 vs. uniprot
Match: A0A7R9Y9C9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9C9_9STRA) HSP 1 Score: 150 bits (380), Expect = 3.610e-37 Identity = 87/256 (33.98%), Postives = 129/256 (50.39%), Query Frame = 1 Query: 490 LVGVTTTKYMTLNPKWTNQTFILPMSENFQVALRDE------------NIPLLFNDRAALPKLRIDVYDWDSLSKNDFLGRVLVSDADILSILRRAR-HDK---------------------------------TCEEERLSFPLGAKQSSGKLGLRVALHESKLLVHVVQGEDLPIADPFSLSDPYCKVYWNNEHIGSTEHINDTLCPSWDTEVFEVDIGPDGLKSVEQSRLRVECLDWDRIGSHDLLGQVELDG 1119 L G T KYM + +WT+QTF+LP+ +F +D+ ++ L ND LP+LR+D++D+D SKNDFLG++L+S ++L ++ HDK E + + P +++ G+L +++A H + V + +G +L ADPFSLSDPYCKVYWN E +G T+ I++TL P W EV P + LR+E DWDR DLLG E+ G Sbjct: 9 LAGTTPVKYMKRSGRWTDQTFVLPLDSSFLSIWQDKLGIDAGLGEERGDLRKLSND-PHLPRLRLDLFDYDKFSKNDFLGQILLSTHELLPLIDEENGHDKCSPPKAKLASRRSSLRHPMESLAFAAKAGQAGEAAEPDLQTLPWQPRRAQGELAIKLARHGDTVAVQICEGRNLEQADPFSLSDPYCKVYWNEELVGETKRIDNTLNPVWSNEVHRFQPKPAAANGI----LRLEVYDWDRFSEDDLLGDFEVGG 259
BLAST of mRNA_C-tenellus_contig1079.5.1 vs. uniprot
Match: A0A6S8TQ69_9STRA (Peptidylprolyl isomerase n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8TQ69_9STRA) HSP 1 Score: 140 bits (352), Expect = 9.490e-31 Identity = 84/291 (28.87%), Postives = 145/291 (49.83%), Query Frame = 1 Query: 334 DTPCKQDKQPLTFQSGCSGPCVHFQLLGCTDLGAADILGYSDPYCAVYWKDALVGVTTTKYMTLNPKWTNQTFILPMSENF-----QVALRDENIPLLFNDRAALPKLRIDVYDWDSLSKNDFLGRVLVSDADILSILRRARHDKTCEEERLSFPLGAKQSSGKLGLRVA--LH----ESKLLVHVVQGEDLPIADPFSLSDPYCKVYWNNEHIGSTEHINDTLCPSWDTEVFEVDIGPDGLKS----------VEQSRLRVECLDWDRIGSHDLLGQVELDGPQLLQLIE 1143 D+ + +P+ F+SGCSGPC+H Q+LG + A L DPYCAVYW+D G T T+ P WT +TF++P+ + ALR + + P LR +V+D ++ K+ F+G+V +S I+ +L C+ E +PL + +G + + A +H S +++ V ++L + S +D Y +W+N +G + ++ P W+ +F + PD K + L ++ ++DR+G H +LG+VE DG + QL++ Sbjct: 11 DSTAMRGGRPIWFESGCSGPCIHVQVLGANRVYQASALDVPDPYCAVYWEDNFAGATQVVDGTVEPVWTGETFVVPVVNPVTHWVERAALRGSKRSHS-SSKYMEPLLRFEVFDHNTFFKDVFVGQVSLSAQQIVKVLA------DCDSESRIYPLRPRMPNGTMRVTAAQTIHIKTGMSHVIIKVEACKELSRSTDVSQNDSYLSAFWDNRPLGESPVARNSSNPQWENCIFHFPL-PDVTKDRGSTNNIARKLRNKTLLIQVREYDRVGEHSVLGEVEFDGTAINQLVK 293
BLAST of mRNA_C-tenellus_contig1079.5.1 vs. uniprot
Match: A0A7S1UI18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UI18_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.040e-29 Identity = 83/236 (35.17%), Postives = 115/236 (48.73%), Query Frame = 1 Query: 625 AALPKLRIDVYDWDSLSKNDFLGRVLVSDADILSILRRARHDKT-------------------------------CEEERLSFPLGAKQSSGKLGLRVALHESKLLVHVVQGEDLPIADPFSLSDPYCKVYWNNEHIGSTEHINDTLCPSWDTEVFE--------------------------VDIGPDGL--------KSVEQSRLRVECLDWDRIGSHDLLGQVELDGPQLLQL 1137 A LP+LR+D++D+D SKNDFLG++L++ D+L ++ + T E+RL P +++ G + L+VA ++ + VHVV+ ++ ADPFSLSDPYCKVYWN E G+T+ I+DTL P W E+F+ V G D +SV LRVE DWDR G HDLLG+V L G L QL Sbjct: 32 AFLPRLRLDLFDYDKFSKNDFLGQILLTTQDVLEMVDPELDEATKAMLEKFSPKKKGKKXXXXXXNAAPPPIPHDFPEQRL--PWQPRRAQGDIALKVAHKDNYIYVHVVEARNIEKADPFSLSDPYCKVYWNGELKGTTKRIDDTLNPVWTNEIFKFRPKAKASMLSNVGLFSALSRGGAALVPGGSDSAESEDDATERSVTDGVLRVEIYDWDRFGEHDLLGEVNLTGKVLQQL 265
BLAST of mRNA_C-tenellus_contig1079.5.1 vs. uniprot
Match: A0A7S3NEV6_9STRA (Peptidylprolyl isomerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NEV6_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.390e-16 Identity = 54/165 (32.73%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 349 QDKQPLTFQSGCSGPCVHFQLLGCTDLGAADILGYSDPYCAVYWKDALVGVTTTKYMTLNPKWTNQTFILPMSE-------NFQVALRDENIPLLFNDR-AALPKLRIDVYDWDSLSKNDFLGRVLVSDADILSILRRARHDKTCEEERLSFPLGAKQSSGKLGL 819 +D +PL F SGCSGPC+H Q+L L I DPYC VYW + VG T+ + T +P W +T ++P+ + F ++P + + ++ P LRI+VYD ++ +++FLG+V ++ I+ IL + E + L K +SG L L Sbjct: 4 RDNRPLIFTSGCSGPCLHIQILSAHRLHRGSIFDIPDPYCVVYWNNRRVGKTSERQDTTDPVWEAETLVIPLQDPLMKNWLEFAALKGKTDVPKIVQETFSSHPGLRIEVYDNNTFRQDEFLGQVALTPPQIVRILAKD------EAAPRVYTLRPKSASGCLSL 162
BLAST of mRNA_C-tenellus_contig1079.5.1 vs. uniprot
Match: A0A7S1TU30_9STRA (Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU30_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.920e-15 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 2469 WYQLKLKEEESASDLVQGSVDARFLFHTRGTVLRGLDIAVSHMSLGERAKVEVRSDYAFGEVYAGFEVPPYSTLVFDAQVMNIGQHNAKWFI 2744 W+ L+ +E+S +VQG RFL H RG LRGLD A+ H+SLG RA + +R D+A+ + Y +VPP S + +D QV IG+ NA+ F+ Sbjct: 97 WFPLRYTKEKSGEGMVQGWARLRFLLHRRGAALRGLDEALQHLSLGTRALIRLRHDFAYADSYVSTKVPPRSVIEYDLQVNQIGRRNARLFL 188
BLAST of mRNA_C-tenellus_contig1079.5.1 vs. uniprot
Match: A0A6P8S4Z9_GEOSA (rasGAP-activating-like protein 1 isoform X2 n=1 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8S4Z9_GEOSA) HSP 1 Score: 84.7 bits (208), Expect = 5.020e-13 Identity = 71/258 (27.52%), Postives = 117/258 (45.35%), Query Frame = 1 Query: 397 VHFQLLGCTDLGAADILGYSDPYCAVYWKDALVGVTTTKYMTLNPKWTNQTFILPMSENFQVALRDENIPLLFNDRAALPKLRIDVYDWDSLSKNDFLGRVLVSDADILSILRRARHDKTCEEERLSFPLGA------------KQSSGKLGLRVALHESK----LLVHVVQGEDLPIADPFSLSDPYCKVYWNNEHIGSTEHINDTLCPSWDTEVFEVDI---GPDGLKSVEQSRLRVECLDWDRIGSHDLLGQVEL 1113 ++F+++ +L A D+ G SDPYC V + +V T T + LNP W + + ++P+ F++ L V D D++ +D +G+V + C E S P G ++ G++ L + + E++ L HV++ DL D SDP+ +V+ NN+ + T I T P WD EV E D+ + +S E S + VE DWD +G +D LG+VE+ Sbjct: 7 LYFRVVEGRNLPAKDVSGSSDPYCIVKVDNEIVARTATVWRNLNPFWGEEYTL--------------HLPMGFHN------LAFYVMDEDTIGHDDVIGKVSL-----------------CREYISSHPKGIDSWINLTRVDPDEEVQGEIYLELHVVENQQRRMLHCHVLEARDLAPRDISGTSDPFARVFCNNQTL-ETSIIKKTRFPHWD-EVLEFDLYLEADEVSESSEASVVSVEVWDWDMVGKNDFLGRVEV 225
BLAST of mRNA_C-tenellus_contig1079.5.1 vs. uniprot
Match: A0A6P7Z8G3_9AMPH (rasGAP-activating-like protein 1 isoform X1 n=5 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7Z8G3_9AMPH) HSP 1 Score: 83.2 bits (204), Expect = 1.510e-12 Identity = 68/257 (26.46%), Postives = 119/257 (46.30%), Query Frame = 1 Query: 397 VHFQLLGCTDLGAADILGYSDPYCAVYWKDALVGVTTTKYMTLNPKWTNQTFILPMSENFQVALRDENIPLLFNDRAALPKLRIDVYDWDSLSKNDFLGRVLVSDADILSILRRARHDKTCEEERLSFPLGA------------KQSSGKLGLRVALHESK----LLVHVVQGEDLPIADPFSLSDPYCKVYWNNEHIGSTEHINDTLCPSWDTEV-FEVDIGPDGL-KSVEQSRLRVECLDWDRIGSHDLLGQVEL 1113 ++F+++ +L A D+ G SDPYC V + +V T T + LNP W + + ++P+ F++ L V D D++ +D +G++ + C E S P G ++ G++ L + + +++ L HV++ DL D SDP+ +V+ NN+ + T I T P WD + F++D+ D + +S E S + VE DWD +G +D LG+VE+ Sbjct: 7 LYFRVVEGRNLPAKDVSGSSDPYCIVKVDNEIVARTATVWRNLNPFWGEEYTL--------------HLPMGFHN------LAFYVMDEDTIGHDDVIGKISL-----------------CREYISSHPKGIDSWINLTRVDPDEEVQGEIYLELHVVDNQQRRMLHCHVLEARDLAPRDISGTSDPFTRVFCNNQTL-ETSIIKKTRFPHWDEVLEFDLDLEADEVSESSEVSVVSVEVWDWDMVGKNDFLGRVEV 225 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1079.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1079.5.1 >prot_C-tenellus_contig1079.5.1 ID=prot_C-tenellus_contig1079.5.1|Name=mRNA_C-tenellus_contig1079.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=652bp MIDPLRYRSLASQIEFDEVQSPLQCWQCVQRGDVSPAFFLCHDCGKVGSAback to top mRNA from alignment at C-tenellus_contig1079:8636..12760- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1079.5.1 ID=mRNA_C-tenellus_contig1079.5.1|Name=mRNA_C-tenellus_contig1079.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4125bp|location=Sequence derived from alignment at C-tenellus_contig1079:8636..12760- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1079:8636..12760- >mRNA_C-tenellus_contig1079.5.1 ID=mRNA_C-tenellus_contig1079.5.1|Name=mRNA_C-tenellus_contig1079.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1956bp|location=Sequence derived from alignment at C-tenellus_contig1079:8636..12760- (Choristocarpus tenellus KU2346)back to top |