prot_C-tenellus_contig9991.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9991.2.1
Unique Nameprot_C-tenellus_contig9991.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length37
Homology
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BLAST of mRNA_C-tenellus_contig9991.2.1 vs. uniprot
Match: D7FTV9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV9_ECTSI)

HSP 1 Score: 47.8 bits (112), Expect = 1.270e-5
Identity = 19/35 (54.29%), Postives = 30/35 (85.71%), Query Frame = 0 
Query:    2 FEQLISTPYMTEAFEEFARKALCQESMLFMNEVSR 36
            FE++ STP +  AFE+++++ALC ES+LF++EVSR
Sbjct:    6 FERIASTPLLAAAFEDYSKRALCHESVLFLSEVSR 40
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BLAST of mRNA_C-tenellus_contig9991.2.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI)

HSP 1 Score: 47.8 bits (112), Expect = 3.720e-5
Identity = 19/35 (54.29%), Postives = 30/35 (85.71%), Query Frame = 0 
Query:    2 FEQLISTPYMTEAFEEFARKALCQESMLFMNEVSR 36
            FE++ STP +  AFE+++++ALC ES+LF++EVSR
Sbjct:  342 FERIASTPLLAAAFEDYSKRALCHESVLFLSEVSR 376
[Close]
BLAST of mRNA_C-tenellus_contig9991.2.1 vs. uniprot
Match: D7G2T5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T5_ECTSI)

HSP 1 Score: 46.6 bits (109), Expect = 9.350e-5
Identity = 19/35 (54.29%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:    2 FEQLISTPYMTEAFEEFARKALCQESMLFMNEVSR 36
            FE+L  TP +  AFE+++++ALC ES+LF++EVSR
Sbjct:  122 FERLARTPLLAAAFEDYSKRALCHESVLFLSEVSR 156
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9991.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTV9_ECTSI1.270e-554.29RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW1_ECTSI3.720e-554.29RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2T5_ECTSI9.350e-554.29RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016137RGS domainPROSITEPS50132RGScoord: 1..36
score: 9.113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9991contigC-tenellus_contig9991:2780..2890 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9991.2.1mRNA_C-tenellus_contig9991.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9991 1550..3100 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9991.2.1 ID=prot_C-tenellus_contig9991.2.1|Name=mRNA_C-tenellus_contig9991.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=37bp
MFEQLISTPYMTEAFEEFARKALCQESMLFMNEVSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS