prot_C-tenellus_contig9977.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9977.2.1
Unique Nameprot_C-tenellus_contig9977.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length195
Homology
[Close]
BLAST of mRNA_C-tenellus_contig9977.2.1 vs. uniprot
Match: D7FQ17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ17_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 1.040e-30
Identity = 89/220 (40.45%), Postives = 109/220 (49.55%), Query Frame = 0 
Query:    1 STIDHEQALALGRILTSRDEHEEAALAFRLASTA-------RPEGSAEAQLGLGLALRSSGRPTDAIEACTEAERLDPTLAAAHACLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALA------------------MGGDPLAAYNLGVAWQLKGETEKSTEAFARSVELQSTLLAPRVNLGVQLLRNGHLDEAE 195
            +T+D  QAL LGR+L SR EHEEAAL +R+A++A       R  G  EAQ GLGLAL ++GRP +A+ AC EAERLDP L  A +C+                                                     A                     GGDP AAYNLGVAWQ KGETEK+  A++R+ +L  TL APRVNLG QLL++G L EAE
Sbjct:   61 TTVDLAQALGLGRVLLSRGEHEEAALVYRVAASAAAAVDSNREHG--EAQHGLGLALLATGRPEEALVACREAERLDPDLPTATSCIGAILTDAGDIAGALTALRHAADKTERGEVTAGLWRDAEGTADTIHGRLGAALLAAGEVDEAIEVLTRVELEARRAGGDPHAAYNLGVAWQTKGETEKAIVAYSRATDLAPTLAAPRVNLGAQLLQSGRLAEAE 278
[Close]
BLAST of mRNA_C-tenellus_contig9977.2.1 vs. uniprot
Match: A0A6H5KFC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC6_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.690e-15
Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 0 
Query:    1 STIDHEQALALGRILTSRDEHEEAALAFRLASTA-------RPEGSAEAQLGLGLALRSSGRPTDAIEACTEAERLDPTLAAAHACL 80
            +T+D  QAL LGR+L SR EHEEAAL +R+A++A       R  G  EAQ GLGLAL ++GRP +A+ AC EAERLDP L  A +C+
Sbjct:   61 TTVDLAQALGLGRVLLSRGEHEEAALVYRVAASAAAAIDSNREHG--EAQHGLGLALLATGRPEEALAACREAERLDPDLPTATSCI 145
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9977.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ17_ECTSI1.040e-3040.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFC6_9PHAE1.690e-1555.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 40..73
e-value: 7.6E-4
score: 28.8
coord: 74..107
e-value: 17.0
score: 13.0
coord: 141..174
e-value: 4.9
score: 16.1
coord: 5..38
e-value: 300.0
score: 2.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 141..174
score: 7.582
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 40..73
score: 7.759
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 5..38
score: 6.431
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 74..107
score: 8.791
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 4..195
e-value: 1.9E-32
score: 114.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 7..194
NoneNo IPR availablePFAMPF13432TPR_16coord: 9..72
e-value: 1.5E-5
score: 25.5
NoneNo IPR availablePFAMPF14559TPR_19coord: 86..145
e-value: 6.6E-7
score: 29.7
NoneNo IPR availablePANTHERPTHR44216PROTEIN O-MANNOSYL-TRANSFERASE TMTC2coord: 95..195
coord: 9..102
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 5..195
score: 24.318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9977contigC-tenellus_contig9977:1315..2396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9977.2.1mRNA_C-tenellus_contig9977.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9977 1315..2396 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9977.2.1 ID=prot_C-tenellus_contig9977.2.1|Name=mRNA_C-tenellus_contig9977.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=195bp
STIDHEQALALGRILTSRDEHEEAALAFRLASTARPEGSAEAQLGLGLAL
RSSGRPTDAIEACTEAERLDPTLAAAHACLGSLLSEAGDGVRAVTAFRRA
GALEPNSAEAAGRLGAALVGVGEADEATTVLARALAMGGDPLAAYNLGVA
WQLKGETEKSTEAFARSVELQSTLLAPRVNLGVQLLRNGHLDEAE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom