prot_C-tenellus_contig993.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig993.2.1
Unique Nameprot_C-tenellus_contig993.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length78
Homology
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BLAST of mRNA_C-tenellus_contig993.2.1 vs. uniprot
Match: D8LDM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDM0_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 2.650e-6
Identity = 29/62 (46.77%), Postives = 40/62 (64.52%), Query Frame = 0 
Query:   19 RKQGFPVTSVSLFGTLDTTEPQGPSHEEGSMFSESAGRR---SPFTPRVRQGPGGNSSLVLG 77
            R QG  VTSV+LFG++D+TEP   +  + +      G+    S ++  +RQGPGGNSSLVLG
Sbjct:  490 RSQGLNVTSVALFGSVDSTEPPAANAVDMAETMSVGGQSNEGSTYSAPIRQGPGGNSSLVLG 551
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig993.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDM0_ECTSI2.650e-646.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig993contigC-tenellus_contig993:8535..8768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig993.2.1mRNA_C-tenellus_contig993.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig993 6702..9842 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig993.2.1 ID=prot_C-tenellus_contig993.2.1|Name=mRNA_C-tenellus_contig993.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=78bp
MSKAINSSPPLNSCFDVTRKQGFPVTSVSLFGTLDTTEPQGPSHEEGSMF
SESAGRRSPFTPRVRQGPGGNSSLVLG*
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