prot_C-tenellus_contig9882.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9882.2.1
Unique Nameprot_C-tenellus_contig9882.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length166
Homology
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BLAST of mRNA_C-tenellus_contig9882.2.1 vs. uniprot
Match: D8LUC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUC5_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 1.030e-6
Identity = 36/116 (31.03%), Postives = 53/116 (45.69%), Query Frame = 0 
Query:   50 EDDTEFMMYVAIGLGIIIGIACLFCRVFYPLSE-VLKDFYKWLTHKEVVDAAPTPEQKEESKWNHWYLSEVLEIDEADRKELGPTGDVRRKKESRQTGGAIGSSLEGWQGAQNGGF 164
            EDD  +++   + +G +   AC +C+V+ PL    +K + +                       HWYL++ L+ID ADR ELGP G         +TG        GW GA+NGGF
Sbjct:   21 EDDGAYVLIAGLIMGGLTFTACCYCKVYDPLRNWSIKTYNRCCKKXXXXXXXXXXXXXXXXXRRHWYLNQTLQIDRADRDELGPQG--------ARTG-----LKGGWYGARNGGF 123
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9882.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUC5_ECTSI1.030e-631.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9882contigC-tenellus_contig9882:3349..4720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9882.2.1mRNA_C-tenellus_contig9882.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9882 1705..5186 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9882.2.1 ID=prot_C-tenellus_contig9882.2.1|Name=mRNA_C-tenellus_contig9882.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=166bp
MYFTSRTLSKSSSQNFLTFSAWQVSGFRQCSPYLLSLRTKWKHSAAMFLE
DDTEFMMYVAIGLGIIIGIACLFCRVFYPLSEVLKDFYKWLTHKEVVDAA
PTPEQKEESKWNHWYLSEVLEIDEADRKELGPTGDVRRKKESRQTGGAIG
SSLEGWQGAQNGGFT*
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