prot_C-tenellus_contig9835.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9835.1.1
Unique Nameprot_C-tenellus_contig9835.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length188
Homology
BLAST of mRNA_C-tenellus_contig9835.1.1 vs. uniprot
Match: D7G7J8_ECTSI (Nucleolar complex associated 2 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7J8_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 6.400e-84
Identity = 133/187 (71.12%), Postives = 158/187 (84.49%), Query Frame = 0
Query:    1 VRVLSYVRIRQMGISLPFPFVEACMRGLYLTFARRARASPSSPQGRRSFRIMEGCVVELYRLDTASAYQNAFLYIRQLSLMLRKAMTQQTSDSFAAVRRWQVVTCLRLWTGVLAAAPGEDELRMMIFPLTQVIGGIIKASPTLIHSPLILQLVRMQQRLAAASCVYIPCTSPLLTVLRSPPLFKKVT 187
            VR+L+Y+R+RQM  +LPFPFVE CM+ LYL FA+RARA P+S  G+ S R+MEGCVVELY +D  SAYQNAFLYIRQLSL+LR+AM  +T DS  AVRRWQVVTCLR+WTGVLAAAPGEDELRM+IFPL QVI GI++ S TL HSPL+ QLVRM+QRLAAA+ +Y+PC +PLL V+RSP LFKK T
Sbjct:  511 VRLLAYLRVRQMAAALPFPFVEGCMKRLYLAFAKRARAPPASQSGKVSLRVMEGCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHRTKDSVQAVRRWQVVTCLRVWTGVLAAAPGEDELRMLIFPLAQVIEGIVRLSATLRHSPLVFQLVRMRQRLAAAAELYVPCATPLLEVIRSPALFKKAT 697          
BLAST of mRNA_C-tenellus_contig9835.1.1 vs. uniprot
Match: A0A7S2S7C6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S7C6_9STRA)

HSP 1 Score: 160 bits (404), Expect = 4.190e-42
Identity = 89/201 (44.28%), Postives = 129/201 (64.18%), Query Frame = 0
Query:    1 VRVLSYVRIRQMGISLPFPFVEACMRGLYLTFARRARASPSSPQGRR--SFRIMEGCVVELYRLDTASAYQNAFLYIRQLSLMLRKAMTQQTSDSFAAVRRWQVVTCLRLWTGVLAAA----PGE----------DELRMMIFPLTQVIGGIIKASPTLIHSPLILQLVRMQQRLAAASCVYIPCTSPLLTVLRSPPLFKK 185
            VR+ +++RIRQ+ ++ PFPF+E C++  YL +A+RA+ + ++       +   M  CVVELY LD AS+YQ+AF+YIRQL+L LR A+ ++T DSF  V  WQ + CL+LWT VLA+A    PGE          + LR +++PLT++I G+ +  PT  H PL LQ VR+ Q+LAA++  YIP TS LL  L    +  K
Sbjct:  396 VRLNAFLRIRQLAVTQPFPFIEQCLKSSYLAYAKRAKFANAATVTTLLPTLTFMGNCVVELYSLDFASSYQHAFVYIRQLALHLRTALQKKTPDSFRVVYCWQYIHCLKLWTAVLASACSRVPGETPTKANEEETELLRSLVYPLTEIILGVSRLIPTSRHLPLHLQCVRLLQQLAASTERYIPTTSILLDALNLKEIMMK 596          
BLAST of mRNA_C-tenellus_contig9835.1.1 vs. uniprot
Match: F0WMP8_9STRA (Nucleolar complex protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMP8_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.250e-41
Identity = 77/179 (43.02%), Postives = 119/179 (66.48%), Query Frame = 0
Query:    3 VLSYVRIRQMGISLPFPFVEACMRGLYLTFARRARASPSSPQGRRSFRIMEGCVVELYRLDTASAYQNAFLYIRQLSLMLRKAMTQQTSDSFAAVRRWQVVTCLRLWTGVLAAAPGEDELRMMIFPLTQVIGGIIKASPTLIHSPLILQLVRMQQRLAAASCVYIPCTSPLLTVLRSPP 181
            +L++VRIR++ I +PFPF+E C++ LYLT+ R  + +       +   +M  CVVELY LD  S+Y +AF+YIRQL++ +RK +   ++DSF AV  WQ V  LR+WT V++A P ED+L+ +I+PL Q+I   ++ + T+  +PL    VRM Q+LA +S  ++P +S LL +L  PP
Sbjct:  367 LLAFVRIRELAIQIPFPFLELCLKALYLTYMRNTKFTHEMNFTHQI--LMGNCVVELYGLDLVSSYHHAFIYIRQLAIAIRKTVISPSTDSFRAVLNWQFVNQLRVWTAVISAYPQEDQLQQLIYPLCQLIHATVRLASTIRFAPLRFHCVRMLQQLALSSETFVPTSSILLEILDMPP 543          
BLAST of mRNA_C-tenellus_contig9835.1.1 vs. uniprot
Match: A0A024GNB9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GNB9_9STRA)

HSP 1 Score: 156 bits (394), Expect = 7.980e-41
Identity = 76/179 (42.46%), Postives = 121/179 (67.60%), Query Frame = 0
Query:    3 VLSYVRIRQMGISLPFPFVEACMRGLYLTFARRARASPSSPQGRRSFRIMEGCVVELYRLDTASAYQNAFLYIRQLSLMLRKAMTQQTSDSFAAVRRWQVVTCLRLWTGVLAAAPGEDELRMMIFPLTQVIGGIIKASPTLIHSPLILQLVRMQQRLAAASCVYIPCTSPLLTVLRSPP 181
            +L++VRIR++ I +PFPF+E C++GLYLT+ R  + +       +   +M  CVVELY LD AS+Y +AF+YIRQL++ +RK +   ++++F AV  WQ V  LR+WT V++A P E++L+ +I+PL Q+I  I++ + T+  +PL    VRM Q+LA +S  ++P +S LL +L   P
Sbjct:  355 LLAFVRIRELAIQIPFPFLELCLKGLYLTYMRNTKFTNELNFTHQI--LMGNCVVELYGLDLASSYHHAFIYIRQLAIAIRKTVISPSTETFRAVLNWQFVNQLRVWTAVISAYPDENQLQQLIYPLCQLINAIVRLASTIRFAPLRFHCVRMLQQLALSSETFVPTSSILLEILDMSP 531          
BLAST of mRNA_C-tenellus_contig9835.1.1 vs. uniprot
Match: B7FQ14_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ14_PHATC)

HSP 1 Score: 155 bits (391), Expect = 2.300e-40
Identity = 86/183 (46.99%), Postives = 122/183 (66.67%), Query Frame = 0
Query:    1 VRVLSYVRIRQMGISLPFPFVEACMRGLYLTFARRAR--ASPSSPQGRRSFRIMEGCVVELYRLDTASAYQNAFLYIRQLSLMLRKAMTQQTSDSFAAVRRWQVVTCLRLWTGVLA-AAPGEDE--LRMMIFPLTQVIGGIIKASPTLI-HSPLILQLVRMQQRLAAASCVYIPCTSPLLTVL 177
            VR+ ++ RIRQ+ ++ PFPFVE C++ +YL +ARRA+   S S+     +   M  C+VELY LD  S+YQ+AF+YIRQL+L+LR AM ++T +SF  V  WQ V CL+LW  VL+ AAP +D   +R +IFPLT++I G  +  P  + H P+    +R+ Q+LAAAS  +IP TS LL  L
Sbjct:  386 VRLNAFFRIRQLALTQPFPFVETCLKKIYLAYARRAKLGVSSSATTAMPTLTFMGNCLVELYSLDYHSSYQHAFVYIRQLALLLRAAMQKKTKESFQQVFCWQYVHCLKLWVAVLSQAAPTDDGAMMRSLIFPLTEIIQGTCRLVPAPVRHVPMRFHCIRLLQQLAAASESFIPTTSFLLECL 568          
BLAST of mRNA_C-tenellus_contig9835.1.1 vs. uniprot
Match: A0A7R9UBE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBE0_9STRA)

HSP 1 Score: 146 bits (369), Expect = 5.470e-40
Identity = 78/178 (43.82%), Postives = 115/178 (64.61%), Query Frame = 0
Query:    1 VRVLSYVRIRQMGISLPFPFVEACMRGLYLTFARRARASPSSPQGRRSFRI------------MEGCVVELYRLDTASAYQNAFLYIRQLSLMLRKAMTQQTSDSFAAVRRWQVVTCLRLWTGVLAAAPGEDELRMMIFPLTQVIGGIIKASPTLIHSPLILQLVRMQQRLAAASCVY 166
            +R+ +Y  I  +  ++P PF++  ++G YLT+ RR+R++P+S  G  +  I            M  C+VE+Y +D  S+YQ AFLYIRQL+L LR A  ++T +SFA V  WQ ++ LRLWT VL+A PG +EL+ +I+PLTQVI G +K  PT    PL L  +R+ Q+LAAAS ++
Sbjct:  117 IRLSAYTAIWDLSTAVPAPFLDLALKGSYLTYVRRSRSAPASGGGAGAEAISTAVEKAAAQAFMASCIVEMYGIDLGSSYQCAFLYIRQLALHLRTAYAKKTKESFAMVLSWQFLSSLRLWTLVLSAYPGPEELQPLIYPLTQVIQGSMKLLPTSKFLPLRLHCIRLLQQLAAASGLF 294          
BLAST of mRNA_C-tenellus_contig9835.1.1 vs. uniprot
Match: A0A7S3PY41_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PY41_9STRA)

HSP 1 Score: 154 bits (388), Expect = 6.430e-40
Identity = 86/190 (45.26%), Postives = 123/190 (64.74%), Query Frame = 0
Query:    1 VRVLSYVRIRQMGISLPFPFVEACMRGLYLTFARRARASPSS------PQGRRSFRIMEGCVVELYRLDTASAYQNAFLYIRQLSLMLRKAMTQQTSDSFAAVRRWQVVTCLRLWTGVLAAA-----PGEDE---LRMMIFPLTQVIGGIIKASPTLIHSPLILQLVRMQQRLAAASCVYIPCTSPLLTV 176
            VRV S++RIRQ+ ++ PFPF+E C++ +YL +AR A+ + +S      PQ       M  CVVELY LD AS+YQ++F+YIRQL+L LR A+ ++T ++   V  WQ + CL+LWT VLAA+      G+DE   +R +I+PL +VI G+ K  P+  H PL L  +R   +LAA+S  +IP TS LL V
Sbjct:  419 VRVNSFLRIRQLALTQPFPFIEMCLKSVYLAYARSAKFANASSISSLLPQ----LTFMGNCVVELYTLDYASSYQHSFIYIRQLALHLRTALQKKTPETLRVVYCWQYMHCLKLWTAVLAASCGKPNDGDDEAGLMRSLIYPLVEVIFGVAKLVPSTRHLPLRLHCIRFLHQLAASSETFIPTTSLLLEV 604          
BLAST of mRNA_C-tenellus_contig9835.1.1 vs. uniprot
Match: W7T2Z2_9STRA (Uncharacterized protein family UPF0120 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Z2_9STRA)

HSP 1 Score: 154 bits (388), Expect = 6.920e-40
Identity = 82/194 (42.27%), Postives = 126/194 (64.95%), Query Frame = 0
Query:    1 VRVLSYVRIRQMGISLPFPFVEACMRGLYLTFARRAR-ASPSSPQGRRSFRIMEGCVVELYRLDTASAYQNAFLYIRQLSLMLRKAMTQQTSDSFAAVRRWQVVTCLRLWTGVLAAA----PGED----ELRMMIFPLTQVIGGIIKASPTLIHSPLILQLVRMQQRLAAASCVYIPCTSPLLTVLRSPPLFKK 185
            V++++++R+RQ    LPFPF+E C++G YL++AR A+  S +S  G     +M   +VELY LD ASAYQ+AF+Y+RQL+L LR A T++T ++   V+ WQ + C ++W  VL A     PG D    +LR ++FPL Q++ G ++ +P+    PL L  + + QRLAA + V+IPC +P L++L  P L KK
Sbjct:  417 VKLVAFLRVRQAATVLPFPFLEHCLKGAYLSYARNAKFVSEASLPG---LTLMGNGLVELYGLDLASAYQHAFVYVRQLALHLRAAYTKKTPEALQKVQCWQYLNCCKVWVAVLTAHVAPDPGSDKAPSQLRELVFPLAQILLGAVRLTPSARLYPLTLHCLTLLQRLAARAQVFIPCAAPCLSMLEDPALSKK 607          
BLAST of mRNA_C-tenellus_contig9835.1.1 vs. uniprot
Match: A0A484EH37_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EH37_BRELC)

HSP 1 Score: 152 bits (384), Expect = 1.630e-39
Identity = 74/179 (41.34%), Postives = 120/179 (67.04%), Query Frame = 0
Query:    3 VLSYVRIRQMGISLPFPFVEACMRGLYLTFARRARASPSSPQGRRSFRIMEGCVVELYRLDTASAYQNAFLYIRQLSLMLRKAMTQQTSDSFAAVRRWQVVTCLRLWTGVLAAAPGEDELRMMIFPLTQVIGGIIKASPTLIHSPLILQLVRMQQRLAAASCVYIPCTSPLLTVLRSPP 181
            +L++VRIR M +++PFPF+E C++G+Y+++ R  + +           +M  CVVEL+ LD +S+YQ+AF+YIR L++ +RK +T   SDSF AV  WQ +  LR+WT VL A P E++LR +++PL+Q++  +I+ S TL  +PL    V++ Q+LA A+  +IP +  LL +L+  P
Sbjct:  331 MLAFVRIRDMALAVPFPFLELCLKGIYVSYMRNTKFTNEMTLPHHV--LMGNCVVELFGLDLSSSYQHAFVYIRVLAIAVRKTITSPGSDSFKAVLNWQFLNQLRVWTAVLCAYPAENQLRALVYPLSQLLFAVIRLSSTLRFTPLRFHCVKLLQQLALATNAFIPTSPALLEMLQLEP 507          
BLAST of mRNA_C-tenellus_contig9835.1.1 vs. uniprot
Match: A0A0P1AWQ5_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWQ5_PLAHL)

HSP 1 Score: 152 bits (383), Expect = 2.150e-39
Identity = 73/179 (40.78%), Postives = 119/179 (66.48%), Query Frame = 0
Query:    3 VLSYVRIRQMGISLPFPFVEACMRGLYLTFARRARASPSSPQGRRSFRIMEGCVVELYRLDTASAYQNAFLYIRQLSLMLRKAMTQQTSDSFAAVRRWQVVTCLRLWTGVLAAAPGEDELRMMIFPLTQVIGGIIKASPTLIHSPLILQLVRMQQRLAAASCVYIPCTSPLLTVLRSPP 181
            +L++VRIR M +++PFPF+E C++G+Y+T+ R  + +           +M  CVVEL+ LD +S+YQ+AF+YIRQL++ +RK +T    DSF AV  WQ    LR+WT V+ A P E++LR +++PL+Q++  +++ S TL  +PL    +++ Q+LA A+  +IP +  LL VL+  P
Sbjct:  345 MLTFVRIRDMALAVPFPFLELCLKGIYVTYMRNTKFTNEVTLPHHI--LMGNCVVELFGLDLSSSYQHAFIYIRQLAIAVRKTITSPGPDSFKAVLNWQFFNQLRVWTAVVCAYPAENQLRALVYPLSQLLLAVVRLSSTLRFTPLRFHCIKLLQQLALATNSFIPTSPALLEVLQLEP 521          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9835.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7J8_ECTSI6.400e-8471.12Nucleolar complex associated 2 homolog n=2 Tax=Ect... [more]
A0A7S2S7C6_9STRA4.190e-4244.28Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
F0WMP8_9STRA3.250e-4143.02Nucleolar complex protein putative n=1 Tax=Albugo ... [more]
A0A024GNB9_9STRA7.980e-4142.46Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
B7FQ14_PHATC2.300e-4046.99Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7R9UBE0_9STRA5.470e-4043.82Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3PY41_9STRA6.430e-4045.26Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
W7T2Z2_9STRA6.920e-4042.27Uncharacterized protein family UPF0120 n=2 Tax=Mon... [more]
A0A484EH37_BRELC1.630e-3941.34Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A0P1AWQ5_PLAHL2.150e-3940.78Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005343Nucleolar complex protein 2PFAMPF03715Noc2coord: 20..182
e-value: 1.3E-43
score: 149.3
IPR005343Nucleolar complex protein 2PANTHERPTHR12687NUCLEOLAR COMPLEX 2 AND RAD4-RELATEDcoord: 1..182
NoneNo IPR availablePANTHERPTHR12687:SF4NUCLEOLAR COMPLEX PROTEIN 2 HOMOLOGcoord: 1..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9835contigC-tenellus_contig9835:354..5365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9835.1.1mRNA_C-tenellus_contig9835.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9835 354..5365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9835.1.1 ID=prot_C-tenellus_contig9835.1.1|Name=mRNA_C-tenellus_contig9835.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=188bp
VRVLSYVRIRQMGISLPFPFVEACMRGLYLTFARRARASPSSPQGRRSFR
IMEGCVVELYRLDTASAYQNAFLYIRQLSLMLRKAMTQQTSDSFAAVRRW
QVVTCLRLWTGVLAAAPGEDELRMMIFPLTQVIGGIIKASPTLIHSPLIL
QLVRMQQRLAAASCVYIPCTSPLLTVLRSPPLFKKVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005343Noc2