prot_C-tenellus_contig969.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig969.3.1
Unique Nameprot_C-tenellus_contig969.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length77
Homology
BLAST of mRNA_C-tenellus_contig969.3.1 vs. uniprot
Match: D7FKQ4_ECTSI (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ4_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 2.490e-43
Identity = 70/76 (92.11%), Postives = 75/76 (98.68%), Query Frame = 0
Query:    1 MQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIVAQEFMKQFVQ 76
            MQRAEQFVVMRRKPAEG+DISFLVTH+HLEK+WKHKLIDFIIQFMEDIDKEISGMKIAINARGRI+AQ+FM QFVQ
Sbjct:   95 MQRAEQFVVMRRKPAEGFDISFLVTHSHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ 170          
BLAST of mRNA_C-tenellus_contig969.3.1 vs. uniprot
Match: A0A836CIE5_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIE5_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.200e-36
Identity = 59/74 (79.73%), Postives = 68/74 (91.89%), Query Frame = 0
Query:    1 MQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIVAQEFMKQF 74
            MQR+EQF+VMRRK A GYDISFL+TH HLE MWKHKL+DF+I+FMEDIDKEISGMKIAINAR RIVA E+++QF
Sbjct:   95 MQRSEQFIVMRRKAAPGYDISFLITHAHLEGMWKHKLVDFVIEFMEDIDKEISGMKIAINARARIVASEYVRQF 168          
BLAST of mRNA_C-tenellus_contig969.3.1 vs. uniprot
Match: A0A067C4Y9_SAPPC (Actin-related protein 2/3 complex subunit 4 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C4Y9_SAPPC)

HSP 1 Score: 129 bits (323), Expect = 2.340e-36
Identity = 58/74 (78.38%), Postives = 69/74 (93.24%), Query Frame = 0
Query:    1 MQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIVAQEFMKQF 74
            MQRAEQF+++RRKP EGYD+SFL+TH+HLE ++KHKL+DFIIQFMEDIDKEIS MKI +NARGR+VA EFMKQF
Sbjct:   95 MQRAEQFIILRRKPIEGYDMSFLITHSHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168          
BLAST of mRNA_C-tenellus_contig969.3.1 vs. uniprot
Match: A0A2R5GGD7_9STRA (Actin-related protein 2/3 complex subunit 4 (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGD7_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.760e-36
Identity = 55/74 (74.32%), Postives = 68/74 (91.89%), Query Frame = 0
Query:    1 MQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIVAQEFMKQF 74
            MQRAEQFV++RRKP EGYD+SFL+TH HLE +WKHKL+DF+IQFME+ID+EI+GMKIA+N R RIV+ EFM+QF
Sbjct:   53 MQRAEQFVILRRKPLEGYDLSFLITHKHLEILWKHKLVDFVIQFMEEIDREINGMKIAVNTRARIVSHEFMRQF 126          
BLAST of mRNA_C-tenellus_contig969.3.1 vs. uniprot
Match: A0A2D4BNX3_PYTIN (Actin-related protein 2/3 complex subunit 4 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNX3_PYTIN)

HSP 1 Score: 128 bits (322), Expect = 3.320e-36
Identity = 60/74 (81.08%), Postives = 68/74 (91.89%), Query Frame = 0
Query:    1 MQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIVAQEFMKQF 74
            MQRAEQF++MRR P EGY +SFL+THTHLE ++KHKLIDFIIQFMEDIDKEIS MKI++NARGRIVA EFMKQF
Sbjct:   95 MQRAEQFIIMRRVPVEGYHMSFLITHTHLESLYKHKLIDFIIQFMEDIDKEISEMKISLNARGRIVATEFMKQF 168          
BLAST of mRNA_C-tenellus_contig969.3.1 vs. uniprot
Match: F0WR02_9STRA (Actin-related protein 2/3 complex subunit 4 n=3 Tax=Oomycota TaxID=4762 RepID=F0WR02_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.020e-35
Identity = 59/74 (79.73%), Postives = 68/74 (91.89%), Query Frame = 0
Query:    1 MQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIVAQEFMKQF 74
            MQR+EQF++MRR P EGY ISFL+THTHLE ++KHKLIDFIIQFM+DIDKEIS MKI++NARGRIVA EFMKQF
Sbjct:  109 MQRSEQFIIMRRVPVEGYQISFLITHTHLENLYKHKLIDFIIQFMQDIDKEISEMKISLNARGRIVATEFMKQF 182          
BLAST of mRNA_C-tenellus_contig969.3.1 vs. uniprot
Match: G4ZZ97_PHYSP (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=G4ZZ97_PHYSP)

HSP 1 Score: 126 bits (316), Expect = 1.270e-35
Identity = 60/74 (81.08%), Postives = 66/74 (89.19%), Query Frame = 0
Query:    1 MQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIVAQEFMKQF 74
            MQRAEQF++MRR P EGYD+SFLV H HLE M+KHKLIDFII FMEDIDKEIS MKI++NARGRIVA EFMKQF
Sbjct:   69 MQRAEQFIIMRRVPVEGYDMSFLVVHQHLENMYKHKLIDFIITFMEDIDKEISEMKISLNARGRIVATEFMKQF 142          
BLAST of mRNA_C-tenellus_contig969.3.1 vs. uniprot
Match: K3WN29_GLOUD (Actin-related protein 2/3 complex subunit 4 n=27 Tax=Oomycota TaxID=4762 RepID=K3WN29_GLOUD)

HSP 1 Score: 127 bits (318), Expect = 1.310e-35
Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 0
Query:    1 MQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIVAQEFMKQF 74
            MQRA+QF++MRR P EGYD+SFLV HTHLE M+KHKLIDFII FMEDIDKEIS MKI++NARGRIVA EFMKQF
Sbjct:   94 MQRADQFIIMRRVPVEGYDMSFLVIHTHLENMYKHKLIDFIITFMEDIDKEISEMKISLNARGRIVATEFMKQF 167          
BLAST of mRNA_C-tenellus_contig969.3.1 vs. uniprot
Match: A0A024TP77_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP77_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.330e-35
Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 0
Query:    1 MQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIVAQEFMKQF 74
            MQRAEQF++MRRKP EGY ISFL+ HTHLE ++KHKL+DFIIQFMEDIDKEIS MKI +NARGR+VA EFMKQF
Sbjct:  144 MQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 217          
BLAST of mRNA_C-tenellus_contig969.3.1 vs. uniprot
Match: F0Y687_AURAN (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y687_AURAN)

HSP 1 Score: 127 bits (318), Expect = 1.380e-35
Identity = 58/74 (78.38%), Postives = 68/74 (91.89%), Query Frame = 0
Query:    1 MQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIVAQEFMKQF 74
            MQR+EQFV+MRRKPAEGY ISFL+THTHLEKMWK KL+DFII FMEDI+KEIS M+IA+N+R RIVA+EF+K F
Sbjct:   95 MQRSEQFVIMRRKPAEGYSISFLITHTHLEKMWKGKLVDFIITFMEDINKEISAMRIALNSRARIVAEEFLKDF 168          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig969.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKQ4_ECTSI2.490e-4392.11Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A836CIE5_9STRA1.200e-3679.73Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A067C4Y9_SAPPC2.340e-3678.38Actin-related protein 2/3 complex subunit 4 n=4 Ta... [more]
A0A2R5GGD7_9STRA2.760e-3674.32Actin-related protein 2/3 complex subunit 4 (Fragm... [more]
A0A2D4BNX3_PYTIN3.320e-3681.08Actin-related protein 2/3 complex subunit 4 n=2 Ta... [more]
F0WR02_9STRA1.020e-3579.73Actin-related protein 2/3 complex subunit 4 n=3 Ta... [more]
G4ZZ97_PHYSP1.270e-3581.08Uncharacterized protein n=2 Tax=Peronosporaceae Ta... [more]
K3WN29_GLOUD1.310e-3581.08Actin-related protein 2/3 complex subunit 4 n=27 T... [more]
A0A024TP77_9STRA1.330e-3579.73Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
F0Y687_AURAN1.380e-3578.38Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008384Actin-related protein 2/3 complex subunit 4PFAMPF05856ARPC4coord: 1..72
e-value: 1.1E-32
score: 112.9
IPR008384Actin-related protein 2/3 complex subunit 4PANTHERPTHR22629ARP2/3 COMPLEX 20 KD SUBUNITcoord: 1..74
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 1..74
e-value: 1.3E-32
score: 114.5
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 1..74
NoneNo IPR availablePANTHERPTHR22629:SF0ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 4coord: 1..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig969contigC-tenellus_contig969:3089..3795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig969.3.1mRNA_C-tenellus_contig969.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig969 2411..4817 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig969.3.1 ID=prot_C-tenellus_contig969.3.1|Name=mRNA_C-tenellus_contig969.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=77bp
MQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDK
EISGMKIAINARGRIVAQEFMKQFVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008384ARPC4
IPR034666ARPC2/4