prot_C-tenellus_contig9677.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9677.1.1
Unique Nameprot_C-tenellus_contig9677.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length90
Homology
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BLAST of mRNA_C-tenellus_contig9677.1.1 vs. uniprot
Match: A0A6H5JX52_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX52_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 5.210e-18
Identity = 45/88 (51.14%), Postives = 54/88 (61.36%), Query Frame = 0 
Query:    1 MARALTLRILYLCMNDGKDRQTALEMAAGYAMVRAETVSNWERDFLTKGHIKVSEQGRDKRCFVLGVDEDILPEVKEWVCEHTGRKKG 88
            +  ALTL  LY   NDG DR+TAL+MAA       +TV  WER FL +GHIKVS  GR +R F+LG+D  IL E K+W     G  KG
Sbjct:  281 VVHALTLAELYRQQNDGVDRETALQMAAETGFCTPDTVREWERSFLARGHIKVSAAGRFQRNFLLGLDNSILTECKDWTRAWGGILKG 368
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BLAST of mRNA_C-tenellus_contig9677.1.1 vs. uniprot
Match: A0A6H5JSJ0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSJ0_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 5.220e-6
Identity = 29/64 (45.31%), Postives = 35/64 (54.69%), Query Frame = 0 
Query:    5 LTLRILYLCMNDGKDRQTALEMAAGYAMVRAETVSNWERDFLTKGHIKVSEQGRDKRCFVLGVD 68
            +TL  LY    DG DR+ AL +AA      A+TV  WERDF+  G IK  + GR KR F    D
Sbjct:    1 MTLIQLYTQQADGFDRKDALTIAAEVGRRTAQTVQEWERDFIAHGRIKKPDTGRFKRRFXFAQD 64
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9677.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JX52_9PHAE5.210e-1851.14Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSJ0_9PHAE5.220e-645.31Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9677contigC-tenellus_contig9677:4588..4857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9677.1.1mRNA_C-tenellus_contig9677.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9677 4522..4857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9677.1.1 ID=prot_C-tenellus_contig9677.1.1|Name=mRNA_C-tenellus_contig9677.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=90bp
MARALTLRILYLCMNDGKDRQTALEMAAGYAMVRAETVSNWERDFLTKGH
IKVSEQGRDKRCFVLGVDEDILPEVKEWVCEHTGRKKGGE
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