prot_C-tenellus_contig9633.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9633.1.1
Unique Nameprot_C-tenellus_contig9633.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length126
Homology
BLAST of mRNA_C-tenellus_contig9633.1.1 vs. uniprot
Match: A0A6H5JWZ4_9PHAE (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ4_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.850e-27
Identity = 52/79 (65.82%), Postives = 65/79 (82.28%), Query Frame = 0
Query:   47 GFPKGCVKRIMKLGEDTRNVSGEALLLITKASELFLERFAKETFRHAHEEGRRAIKYQDVSDVRVADPNLIFLEAVVPP 125
            G P   V+RIMKLGE+TRN+S EAL+++ KASE+FLE+FA   F HA + GR+ IKY+DVSDVR+ DPNL+FLEAVVPP
Sbjct:  135 GLPPSMVRRIMKLGEETRNISKEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRLEDPNLLFLEAVVPP 213          
BLAST of mRNA_C-tenellus_contig9633.1.1 vs. uniprot
Match: D8LBX1_ECTSI (Histone-like transcription factor family (CBF/NF-Y) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX1_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 2.040e-27
Identity = 53/79 (67.09%), Postives = 64/79 (81.01%), Query Frame = 0
Query:   47 GFPKGCVKRIMKLGEDTRNVSGEALLLITKASELFLERFAKETFRHAHEEGRRAIKYQDVSDVRVADPNLIFLEAVVPP 125
            G P   VKRIMKLGE+TRN+S EAL+++ KASE+FLE+ A   F HA + GR+ IKY+DVSDVRV DPNL+FLEAVVPP
Sbjct:  139 GLPPSMVKRIMKLGEETRNISKEALVIVVKASEIFLEKLAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVPP 217          
BLAST of mRNA_C-tenellus_contig9633.1.1 vs. uniprot
Match: A0A6V1PCP5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PCP5_HETAK)

HSP 1 Score: 84.7 bits (208), Expect = 2.700e-18
Identity = 40/85 (47.06%), Postives = 60/85 (70.59%), Query Frame = 0
Query:   41 YQKRE-QGFPKGCVKRIMKLGEDTRNVSGEALLLITKASELFLERFAKETFRHAHEEGRRAIKYQDVSDVRVADPNLIFLEAVVP 124
            Y KR+    P+  VKRIMKL ++ + ++ E   L+ KA+ LFLE+FA+++F  A   G + I+Y+DV+D RV+DPNL+FLE V+P
Sbjct:   67 YSKRKGTALPRASVKRIMKLDDEIKQINKEGTTLVEKAAVLFLEKFAQDSFAKAQTRGAKMIRYEDVADARVSDPNLLFLEGVIP 151          
BLAST of mRNA_C-tenellus_contig9633.1.1 vs. uniprot
Match: A0A7S2G0X5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0X5_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.050e-18
Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = 0
Query:   44 REQGFPKGCVKRIMKLGEDTRNVSGEALLLITKASELFLERFAKETFRHAHEEGRRAIKYQDVSDVRVADPNLIFLEAVVP 124
            +E   PK  VKRIMKL +D + V  EA+LL+ KA+ELFLE FA ++ +HA +  R+ IKY+D+ + RVAD NL FL+ ++P
Sbjct:   49 KELAIPKNAVKRIMKLEDDVKQVQAEAVLLVAKATELFLESFALDSHKHAVKMERKQIKYEDLLETRVADSNLEFLKHIIP 129          
BLAST of mRNA_C-tenellus_contig9633.1.1 vs. uniprot
Match: A0A7S2UXP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.010e-15
Identity = 36/83 (43.37%), Postives = 58/83 (69.88%), Query Frame = 0
Query:   42 QKREQGFPKGCVKRIMKLGEDTRNVSGEALLLITKASELFLERFAKETFRHAHEEGRRAIKYQDVSDVRVADPNLIFLEAVVP 124
            +++    PK  V+RIMKL ++T+ V+ EA+ L  KA+E+ +E+ A+++F  A   G R I+Y+DV+  R+ADPNL FL+ V+P
Sbjct:   59 EQKTMVLPKNAVRRIMKLDQETKTVTQEAVYLAGKATEILVEKLARDSFEQAKTRGGRMIRYEDVAKARIADPNLDFLKDVMP 141          
BLAST of mRNA_C-tenellus_contig9633.1.1 vs. uniprot
Match: A0A7S2RT01_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT01_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.300e-13
Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 0
Query:   48 FPKGCVKRIMKLGEDTRNVSGEALLLITKASELFLERFAKETFRHAHEEGRRAIKYQDVSDVRVADPN-LIFLEAVVP 124
             P+  VKRIMKL ED + V  EA+LL+ KA+ELFLE+FAK++   +    R+ +KY+D+ + R+ D N L FL  ++P
Sbjct:   76 IPRNAVKRIMKLQEDVKQVQAEAVLLVAKATELFLEKFAKDSHATSQRAERKQLKYEDLLETRLNDENTLAFLTHIIP 153          
BLAST of mRNA_C-tenellus_contig9633.1.1 vs. uniprot
Match: A0A835YPZ2_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ2_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.320e-13
Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 0
Query:   42 QKREQGFPKGCVKRIMKL-GEDTRNVSGEALLLITKASELFLERFAKETFRHAHEEGRRAIKYQDVSDVRVADPNLIFLEAVVP 124
            Q+ E  FPKG VK IM+L G+D   +S EA+ L+ KASE FLE++A++ +  A +  RR I+YQD+    ++   L+FL  VVP
Sbjct:   60 QQLELAFPKGKVKSIMRLAGDDIEKISNEAISLVGKASECFLEKYAQDCWTVATDNRRRVIQYQDLRQTHLSSEALVFLRGVVP 143          
BLAST of mRNA_C-tenellus_contig9633.1.1 vs. uniprot
Match: A0A7S3JZM4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZM4_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.610e-12
Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = 0
Query:   48 FPKGCVKRIMKLGEDTRNVSGEALLLITKASELFLERFAKETFRHAHEEGRRAIKYQDVSDVRVADPNLIFLEAVVPP 125
             PKG +KRIMK+  D   V+ +A++L+ KA+ELF+E+  K+    A   GR+ I Y D+ + R  D  L F+E ++PP
Sbjct:   64 IPKGSIKRIMKIDGDVNQVANDAIILVAKATELFMEKLTKDAHDIATANGRKIINYNDLVNARELDSELHFMEPILPP 141          
BLAST of mRNA_C-tenellus_contig9633.1.1 vs. uniprot
Match: W7TNB3_9STRA (Histone-like transcription factor family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNB3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.980e-12
Identity = 32/77 (41.56%), Postives = 53/77 (68.83%), Query Frame = 0
Query:   48 FPKGCVKRIMKLGEDTRNVSGEALLLITKASELFLERFAKETFRHAHEEGRRAIKYQDVSDVRVADPNLIFLEAVVP 124
             P+  +KRIMKL  DT+ +S +A++++ KA+ELF+++ AK +   A    R+ IKY+D++D R +  N+ FL+ VVP
Sbjct:  120 IPRASIKRIMKLDPDTKQLSQDAIMVMAKATELFIDKLAKASHSMAVTNKRKTIKYEDIADARFSQKNMEFLDGVVP 196          
BLAST of mRNA_C-tenellus_contig9633.1.1 vs. uniprot
Match: F0Y9H8_AURAN (CBFD_NFYB_HMF domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9H8_AURAN)

HSP 1 Score: 67.0 bits (162), Expect = 3.120e-12
Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   48 FPKGCVKRIMKLGEDTRNVSGEALLLITKASELFLERFAKETFRHAHEEGRRAIKYQDVSDVRVADPNLIFLEAVVP 124
             PK  VKRIMKL  +   V+ +A++L+ KA+E+FLE+F+ E    A    R  +KY+D++D    D N  FL  V+P
Sbjct:    4 IPKAAVKRIMKLDPEVNQVANDAVILVAKATEMFLEKFSAEARAQATLRSRTTVKYEDIADTVSGDKNYEFLATVIP 80          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9633.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWZ4_9PHAE1.850e-2765.82CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
D8LBX1_ECTSI2.040e-2767.09Histone-like transcription factor family (CBF/NF-Y... [more]
A0A6V1PCP5_HETAK2.700e-1847.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2G0X5_9STRA3.050e-1850.62Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2UXP1_9STRA2.010e-1543.37Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RT01_9STRA2.300e-1346.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YPZ2_9STRA2.320e-1345.24CBFD_NFYB_HMF domain-containing protein n=1 Tax=Tr... [more]
A0A7S3JZM4_9STRA1.610e-1241.03Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
W7TNB3_9STRA1.980e-1241.56Histone-like transcription factor family protein n... [more]
F0Y9H8_AURAN3.120e-1241.56CBFD_NFYB_HMF domain-containing protein (Fragment)... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 34..124
e-value: 2.5E-18
score: 68.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 43..124
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 48..107
e-value: 7.4E-15
score: 55.0
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 48..124
NoneNo IPR availablePANTHERPTHR10252:SF93HISTONE-LIKE TRANSCRIPTION FACTOR AND ARCHAEAL HISTONE FAMILY PROTEIN, EXPRESSEDcoord: 48..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9633contigC-tenellus_contig9633:945..1834 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9633.1.1mRNA_C-tenellus_contig9633.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9633 609..2834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9633.1.1 ID=prot_C-tenellus_contig9633.1.1|Name=mRNA_C-tenellus_contig9633.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=126bp
MSQSNVVERRSGHSPAVPRFTLCLLSTNPLVSPTCTTPVKYQKREQGFPK
GCVKRIMKLGEDTRNVSGEALLLITKASELFLERFAKETFRHAHEEGRRA
IKYQDVSDVRVADPNLIFLEAVVPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003958CBFA_NFYB_domain