prot_C-tenellus_contig963.1.5 (polypeptide) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig963.1.5 vs. uniprot
Match: D8LE56_ECTSI (TFIIS-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE56_ECTSI) HSP 1 Score: 148 bits (373), Expect = 2.210e-41 Identity = 66/83 (79.52%), Postives = 74/83 (89.16%), Query Frame = 0 Query: 27 NNILYPKENKAQHKLMYACSRCTYVEEVDQGACVYRNNLITTAGNKLDIVQADVIDDPTLQRSKSAICEKCNYNEAVFFQADE 109 NNI++PKENK KLMY+C+RC Y E+ G+CVYRNNLITTAGNKLDIVQ DV+DDPTLQRSK+AICEKCNYNEAVFFQADE Sbjct: 131 NNIMHPKENKTDRKLMYSCNRCKYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADE 213
BLAST of mRNA_C-tenellus_contig963.1.5 vs. uniprot
Match: A0A835YYP5_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYP5_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.510e-30 Identity = 53/83 (63.86%), Postives = 64/83 (77.11%), Query Frame = 0 Query: 27 NNILYPKENKAQHKLMYACSRCTYVEEVDQGACVYRNNLITTAGNKLDIVQADVIDDPTLQRSKSAICEKCNYNEAVFFQADE 109 NNIL+PKEN+ L YAC+RC Y EE Q +CVY NNL+ T KLDIV DV++DPTLQRSK IC++CNY+EAVFFQAD+ Sbjct: 8 NNILHPKENRTTRTLFYACNRCAYREEAGQ-SCVYENNLVKTTELKLDIVHEDVVNDPTLQRSKHQICDRCNYSEAVFFQADD 89
BLAST of mRNA_C-tenellus_contig963.1.5 vs. uniprot
Match: A0A1Y1IMB2_KLENI (DNA-directed RNA polymerase subunit n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMB2_KLENI) HSP 1 Score: 91.3 bits (225), Expect = 1.340e-20 Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 0 Query: 27 NNILYPKENKAQHKLMYACSRCTYVEEVDQGACVYRNNLITTAGNKLDIVQADVIDDPTLQRSKSAICEKCNYNEAVFFQA 107 NNILYP+ENKA+ +L YAC RC + E+ +Q +CVYRN + TA + ++Q DV DPTL RSK+ C C + EAVFFQA Sbjct: 11 NNILYPRENKAEKRLEYACGRCDFSEDAEQ-SCVYRNEIHHTADERTQVLQ-DVTSDPTLPRSKALRCPVCKHGEAVFFQA 89
BLAST of mRNA_C-tenellus_contig963.1.5 vs. uniprot
Match: B8BUI2_THAPS (DNA-directed RNA polymerase subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUI2_THAPS) HSP 1 Score: 90.1 bits (222), Expect = 3.470e-20 Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 0 Query: 22 CPYSSNNILYPKENKAQHKLMYACSRCTYVEEVDQGACVYRNNLITTAGNKLDIVQADVIDDPTLQRSKSAICEKCNYNEAVFFQAD 108 CP+ S+ +LYPKEN+ + KL+YAC C Y E G +Y+N L GN L V + V DDPTL RS++A C+KC +NEAVFFQ+D Sbjct: 4 CPHDSS-MLYPKENRNERKLLYACRLCRYTEYAP-GQLIYQNILKKEVGNVLHTVPSAVSDDPTLPRSQNAHCDKCGHNEAVFFQSD 88
BLAST of mRNA_C-tenellus_contig963.1.5 vs. uniprot
Match: A0A6P5Z8D8_DURZI (DNA-directed RNA polymerase subunit n=2 Tax=Malvaceae TaxID=3629 RepID=A0A6P5Z8D8_DURZI) HSP 1 Score: 87.8 bits (216), Expect = 2.900e-19 Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 0 Query: 27 NNILYPKENKAQHKLMYACSRCTYVEEVDQGACVYRNNLITTAGNKLDIVQADVIDDPTLQRSKSAICEKCNYNEAVFFQA 107 NNILYPKE++ Q L+YAC C + +EV + CVYRN + +AG + I+Q DV DPTL R+KS IC C + EAVFFQA Sbjct: 11 NNILYPKEDREQKILLYACRNCDH-QEVAEDNCVYRNEVHHSAGERTQILQ-DVAADPTLPRTKSVICANCKHGEAVFFQA 89
BLAST of mRNA_C-tenellus_contig963.1.5 vs. uniprot
Match: A0A2I4F1N3_JUGRE (DNA-directed RNA polymerase subunit n=38 Tax=Magnoliopsida TaxID=3398 RepID=A0A2I4F1N3_JUGRE) HSP 1 Score: 87.4 bits (215), Expect = 4.100e-19 Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 0 Query: 27 NNILYPKENKAQHKLMYACSRCTYVEEVDQGACVYRNNLITTAGNKLDIVQADVIDDPTLQRSKSAICEKCNYNEAVFFQA 107 NNILYPKE+K Q L+YAC C + E D CVYRN + + G + ++Q DV DPTL R+KS C +CN+ EAVFFQA Sbjct: 11 NNILYPKEDKEQKILLYACRNCDHQEAADNN-CVYRNEIHHSVGERTQVLQ-DVAADPTLPRTKSVRCAECNHGEAVFFQA 89
BLAST of mRNA_C-tenellus_contig963.1.5 vs. uniprot
Match: A0A6J1AX74_9ROSI (DNA-directed RNA polymerase subunit n=2 Tax=Malvaceae TaxID=3629 RepID=A0A6J1AX74_9ROSI) HSP 1 Score: 87.4 bits (215), Expect = 4.100e-19 Identity = 44/81 (54.32%), Postives = 54/81 (66.67%), Query Frame = 0 Query: 27 NNILYPKENKAQHKLMYACSRCTYVEEVDQGACVYRNNLITTAGNKLDIVQADVIDDPTLQRSKSAICEKCNYNEAVFFQA 107 NNILYPKE++ Q L+YAC C + E D CVYRN + +AG + I+Q DV DPTL R+KS IC C + EAVFFQA Sbjct: 11 NNILYPKEDREQKILLYACRNCDHQEVADNN-CVYRNEVHHSAGERTQILQ-DVAADPTLPRTKSVICANCKHGEAVFFQA 89
BLAST of mRNA_C-tenellus_contig963.1.5 vs. uniprot
Match: UPI00192A156F (DNA-directed RNA polymerases II, IV and V subunit 9A-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI00192A156F) HSP 1 Score: 87.4 bits (215), Expect = 4.100e-19 Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 0 Query: 27 NNILYPKENKAQHKLMYACSRCTYVEEVDQGACVYRNNLITTAGNKLDIVQADVIDDPTLQRSKSAICEKCNYNEAVFFQA 107 NNILYPKENK Q L++AC C + +E+ CVYRN ++ + G + ++Q DV DPTL R+K+ C KCN+ E VFFQA Sbjct: 11 NNILYPKENKEQKTLLFACRNCEH-QEISNDNCVYRNEVLHSVGERTQVLQ-DVAADPTLPRTKTIRCTKCNHPEVVFFQA 89
BLAST of mRNA_C-tenellus_contig963.1.5 vs. uniprot
Match: A0A6P4PU27_GOSAR (DNA-directed RNA polymerase subunit n=7 Tax=Gossypium TaxID=3633 RepID=A0A6P4PU27_GOSAR) HSP 1 Score: 87.0 bits (214), Expect = 5.790e-19 Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 0 Query: 27 NNILYPKENKAQHKLMYACSRCTYVEEVDQGACVYRNNLITTAGNKLDIVQADVIDDPTLQRSKSAICEKCNYNEAVFFQA 107 NNILYPKE++ Q L+YAC C + +EV + CVYRN + +AG + I+Q DV DPTL R+K+ IC C + EAVFFQA Sbjct: 11 NNILYPKEDREQKILLYACRNCDH-QEVAENNCVYRNEVHHSAGERTQILQ-DVAADPTLPRTKAVICANCKHGEAVFFQA 89
BLAST of mRNA_C-tenellus_contig963.1.5 vs. uniprot
Match: A0A2I4DWP4_JUGRE (DNA-directed RNA polymerase subunit n=11 Tax=Mesangiospermae TaxID=1437183 RepID=A0A2I4DWP4_JUGRE) HSP 1 Score: 86.3 bits (212), Expect = 1.090e-18 Identity = 43/81 (53.09%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 27 NNILYPKENKAQHKLMYACSRCTYVEEVDQGACVYRNNLITTAGNKLDIVQADVIDDPTLQRSKSAICEKCNYNEAVFFQA 107 NNILYPKE+K Q L+YAC C + E D CVYRN + G + ++Q DV DPTL R+KS C +CN+ EAVFFQA Sbjct: 11 NNILYPKEDKDQKILLYACRNCDHQEVADNN-CVYRNEIHHAVGERTQVLQ-DVAADPTLPRTKSVRCTQCNHGEAVFFQA 89 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig963.1.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-tenellus_contig963.1.5 ID=prot_C-tenellus_contig963.1.5|Name=mRNA_C-tenellus_contig963.1.5|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=179bpback to top |