prot_C-tenellus_contig9604.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9604.1.1
Unique Nameprot_C-tenellus_contig9604.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length173
Homology
BLAST of mRNA_C-tenellus_contig9604.1.1 vs. uniprot
Match: D7FQB1_ECTSI (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB1_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 4.540e-86
Identity = 143/173 (82.66%), Postives = 156/173 (90.17%), Query Frame = 0
Query:    2 GREMMGEPSPHIGRRYTIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVEAYVAAAPIKAGAVEAAVTTTLECPPHLLDLLGDRATIARIVKETHAQVVVNKKIGRIIVRGDPRAVELARGKVQATIYAALN-TYGSG 173
            GRE++GE S  +GR Y+IKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDL SVEHAAKSV+AYVAAAPIKAGAVEAAVT T+ECPP LLD LGDR TIARIVKETHAQVVVNKKIGRIIVRGD R+V+LA   V+A I+ A++ +YG G
Sbjct:   39 GREVLGEGS-FMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIKAGAVEAAVTKTIECPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAVHGSYGLG 210          
BLAST of mRNA_C-tenellus_contig9604.1.1 vs. uniprot
Match: A0A835ZGS8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS8_9STRA)

HSP 1 Score: 256 bits (654), Expect = 5.690e-84
Identity = 128/150 (85.33%), Postives = 141/150 (94.00%), Query Frame = 0
Query:   17 YTIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVEAYVAAAPIKAGAVEAAVTTTLECPPHLLDLLGDRATIARIVKETHAQVVVNKKIGRIIVRGDPRAVELARGKVQATIYAA 166
            Y+IKRCQGFVRCDMDIDAEVVGWVIGK+GSTIKD+K+KTGCNMWVDQRALKLTITGPD+ +VEHAAKSVEAYVAAAPIKAGAVEAAVT +L+CPPHLLD+LGDRATIARIVKET AQVVVNKK+ R+IVRG P AV++A GKVQA I AA
Sbjct:   42 YSIKRCQGFVRCDMDIDAEVVGWVIGKSGSTIKDLKNKTGCNMWVDQRALKLTITGPDVRTVEHAAKSVEAYVAAAPIKAGAVEAAVTRSLDCPPHLLDVLGDRATIARIVKETRAQVVVNKKMARVIVRGGPHAVQMACGKVQAIITAA 191          
BLAST of mRNA_C-tenellus_contig9604.1.1 vs. uniprot
Match: A0A835YT56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT56_9STRA)

HSP 1 Score: 250 bits (638), Expect = 1.000e-78
Identity = 122/150 (81.33%), Postives = 138/150 (92.00%), Query Frame = 0
Query:   17 YTIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVEAYVAAAPIKAGAVEAAVTTTLECPPHLLDLLGDRATIARIVKETHAQVVVNKKIGRIIVRGDPRAVELARGKVQATIYAA 166
            Y+IKRCQGF+RCDMDIDAEVVGWVIG+NGSTIKD+K+KTGCNMWVDQRALKLTITGPD+ +VEHAAK VEAYVAAAPIKAGAVEAAVT +LECPPHLLD+LGDRATIARIVKET AQVVVNKK+ R+I+RG+  AV +A G++Q  I AA
Sbjct:   57 YSIKRCQGFIRCDMDIDAEVVGWVIGRNGSTIKDLKNKTGCNMWVDQRALKLTITGPDVCAVEHAAKCVEAYVAAAPIKAGAVEAAVTRSLECPPHLLDMLGDRATIARIVKETRAQVVVNKKMARVIIRGNAHAVHMACGRIQTIIAAA 206          
BLAST of mRNA_C-tenellus_contig9604.1.1 vs. uniprot
Match: D7FHT5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT5_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 1.400e-32
Identity = 72/161 (44.72%), Postives = 105/161 (65.22%), Query Frame = 0
Query:   19 IKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVEAYVAAAPIK---AGAVEAAVTTTLECPPHLLDLLGDR--ATIARIVKETHAQVVVNKKIGRIIVRGDPRAVELARGKVQATI-YAALNTYGSG 173
            ++R  GFVRC MDI  EVVGWVIG++G+ IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +   +  +ECPPHL+ LL  R  +TI RI +E+ A VV+N+K+ ++IV G P++V L    ++  I +     +G+G
Sbjct:   25 LERFPGFVRCVMDIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITFGRSAEHGAG 185          
BLAST of mRNA_C-tenellus_contig9604.1.1 vs. uniprot
Match: A0A835YRS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS0_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.370e-27
Identity = 62/127 (48.82%), Postives = 88/127 (69.29%), Query Frame = 0
Query:   19 IKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVEAYVAAAPIK---AGAVEAAVTTTLECPPHLLDLLGDR--ATIARIVKETHAQVVVNKKI 140
            +++  GFVRC +DI  EVVGWVIG++GS IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +  V+  ++CPPHL+ LL  R  +TI RI +E+ A VV+N+K+
Sbjct:  292 LEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKM 418          
BLAST of mRNA_C-tenellus_contig9604.1.1 vs. uniprot
Match: A0A6H5JET1_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET1_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 3.890e-17
Identity = 50/129 (38.76%), Postives = 79/129 (61.24%), Query Frame = 0
Query:   51 MKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVEAYVAAAPIK---AGAVEAAVTTTLECPPHLLDLLGDR--ATIARIVKETHAQVVVNKKIGRIIVRGDPRAVELARGKVQATI-YAALNTYGSG 173
            ++H++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +   +  +ECPPHL+ LL  R  +TI RI +E+ A VV+N+K+ ++IV G P++V L    ++  I +     +G+G
Sbjct:   59 LRHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITFGRSAEHGAG 187          
BLAST of mRNA_C-tenellus_contig9604.1.1 vs. uniprot
Match: A0A836CJQ9_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ9_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 7.500e-11
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 0
Query:   35 EVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVEAYVAAAP 93
            EVVGWVIG++GS IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++  P
Sbjct:  318 EVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKVP 376          
BLAST of mRNA_C-tenellus_contig9604.1.1 vs. uniprot
Match: A0A6H5JEQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEQ9_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 9.720e-5
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 0
Query:   19 IKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMK 52
            ++R  GFVRC MDI  EVVGWVIG+NG+ IK+MK
Sbjct:  282 LERFPGFVRCVMDIAPEVVGWVIGRNGAHIKEMK 315          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9604.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FQB1_ECTSI4.540e-8682.66SAM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZGS8_9STRA5.690e-8485.33Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YT56_9STRA1.000e-7881.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FHT5_ECTSI1.400e-3244.72SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YRS0_9STRA1.370e-2748.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JET1_9PHAE3.890e-1738.76SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CJQ9_9STRA7.500e-1155.93SAM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5JEQ9_9PHAE9.720e-567.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 24..90
e-value: 1.3E-8
score: 44.6
coord: 101..164
e-value: 3.8
score: 10.6
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 30..86
e-value: 9.8E-11
score: 41.3
NoneNo IPR availableGENE3D3.30.310.210coord: 28..169
e-value: 7.2E-12
score: 47.3
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 25..85
score: 12.622
NoneNo IPR availableCDDcd00105KH-Icoord: 30..86
e-value: 2.82074E-7
score: 43.7027
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 25..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9604contigC-tenellus_contig9604:79..1032 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9604.1.1mRNA_C-tenellus_contig9604.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9604 79..1032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9604.1.1 ID=prot_C-tenellus_contig9604.1.1|Name=mRNA_C-tenellus_contig9604.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=173bp
MGREMMGEPSPHIGRRYTIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKD
MKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVEAYVAAAPIKAGAVE
AAVTTTLECPPHLLDLLGDRATIARIVKETHAQVVVNKKIGRIIVRGDPR
AVELARGKVQATIYAALNTYGSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf