prot_C-tenellus_contig9601.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9601.1.1
Unique Nameprot_C-tenellus_contig9601.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length290
Homology
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BLAST of mRNA_C-tenellus_contig9601.1.1 vs. uniprot
Match: A0A6H5L5N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N2_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 5.530e-26
Identity = 63/136 (46.32%), Postives = 83/136 (61.03%), Query Frame = 0 
Query:  149 VAPLQISLALQVEALQRQSAELRQSLPHSHSPFNLENMHQSQRSSREEEMEGKDPFREQGDLAYKVCYKGGVAIRSRPDVAAPSVGEVLEWGEG---IWASERMARIGEEEIYVRLRDGRGWVFEWRGNVKVLERV 281
            +A  + SL  ++  LQR+S  LR+SLP        E +  S  +          PFREQ D+A+  CY+GGVAIR+ P + AP  G++L+W E     WASER+ R+GE+ IYV+LRDGRGWVFE     KVLERV
Sbjct:   82 LAQQKASLDARMVNLQRRSTGLRESLPVPMQRHLAERLEASCMA----------PFREQTDMAFVTCYQGGVAIRTAPSLDAPCAGDILQWNEASGVFWASERLGRLGEDMIYVKLRDGRGWVFETLHGKKVLERV 207
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BLAST of mRNA_C-tenellus_contig9601.1.1 vs. uniprot
Match: A0A7S2CR56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CR56_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 7.510e-11
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 0 
Query:  205 REQGDLAYKVCYKGGVAIRSRPDVAAPSVGEVLEWGEGIWASERMARIGEEEIYVRLRDGR-GWVFEWR-GNVKVLE 279
            RE G   Y+VCY+GGVA+R RPDV A    EVL +G   +A ER   + +  +YVR+ +   GWVFE   G VK+LE
Sbjct:  148 RELGYFGYRVCYRGGVALRKRPDVTATHTSEVLPYGLEFYAVERFRALSDGVVYVRIVEPFCGWVFEKTLGGVKILE 224
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9601.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5N2_9PHAE5.530e-2646.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2CR56_9STRA7.510e-1148.05Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..200
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9601contigC-tenellus_contig9601:1951..4367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9601.1.1mRNA_C-tenellus_contig9601.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9601 1489..4529 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9601.1.1 ID=prot_C-tenellus_contig9601.1.1|Name=mRNA_C-tenellus_contig9601.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=290bp
MEACGRVTPSLASAGSCSISEHCLRMLALKVNRTPNCIVTRWPGSNAVVH
FLKNGLTLPPSDRIVFLLTYPHPLGTLMIFIFFNEFVSSCPAISRMALFL
LRIPFLPSHHLIFQPTSSSSLCFPVTPPLTLQPVTTSHPCPMHGFFLYVA
PLQISLALQVEALQRQSAELRQSLPHSHSPFNLENMHQSQRSSREEEMEG
KDPFREQGDLAYKVCYKGGVAIRSRPDVAAPSVGEVLEWGEGIWASERMA
RIGEEEIYVRLRDGRGWVFEWRGNVKVLERVFNLPPPCP*
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