prot_C-tenellus_contig96.5.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig96.5.1
Unique Nameprot_C-tenellus_contig96.5.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length59
Homology
BLAST of mRNA_C-tenellus_contig96.5.1 vs. uniprot
Match: D8LU40_ECTSI (60S ribosomal protein L29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU40_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 2.070e-25
Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    2 QKHHTGRNATFKDHARGIKKAPNHKYKSLKGMDPKFLRNQRFAKKYNKSKR 52
            QKHHTGRNATFKDH  GIKKAPNHKYKS+KGMDPKFLRNQ+FAKKYN SKR
Sbjct:    4 QKHHTGRNATFKDHVNGIKKAPNHKYKSMKGMDPKFLRNQKFAKKYNGSKR 54          
BLAST of mRNA_C-tenellus_contig96.5.1 vs. uniprot
Match: A0A835YVJ7_9STRA (60S ribosomal protein L29 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVJ7_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.830e-18
Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    1 QQKHHTGRNATFKDHARGIKKAPNHKYKSLKGMDPKFLRNQRFAKKYNKSK 51
            QQK+HTGRNA+ KDHA GIKKAP  KY SLKGMDPKFLRNQR+AKK N  K
Sbjct:    2 QQKNHTGRNASAKDHANGIKKAPRFKYNSLKGMDPKFLRNQRYAKKKNPRK 52          
BLAST of mRNA_C-tenellus_contig96.5.1 vs. uniprot
Match: A0A024T9H7_9STRA (60S ribosomal protein L29 n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024T9H7_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.160e-18
Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    2 QKHHTGRNATFKDHARGIKKAPNHKYKSLKGMDPKFLRNQRFAKKYNK 49
            QKHHT RN TFK H  GI+K  NH+YKS KG+DPKFLRNQRFAKKYNK
Sbjct:    4 QKHHTARNQTFKAHKNGIRKPKNHRYKSTKGLDPKFLRNQRFAKKYNK 51          
BLAST of mRNA_C-tenellus_contig96.5.1 vs. uniprot
Match: A0A6G0WTH6_9STRA (60S ribosomal protein L29 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTH6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.330e-16
Identity = 36/50 (72.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    2 QKHHTGRNATFKDHARGIKKAPNHKYKSLKGMDPKFLRNQRFAKKYNKSK 51
            QKHHT RN TFK H  GI+K   H+Y S KG+DPKFLRNQRFAKKYNK K
Sbjct:    4 QKHHTARNQTFKAHKNGIRKPKAHRYHSTKGLDPKFLRNQRFAKKYNKKK 53          
BLAST of mRNA_C-tenellus_contig96.5.1 vs. uniprot
Match: A0A3R6YYP3_9STRA (60S ribosomal protein L29 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YYP3_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 9.590e-16
Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    2 QKHHTGRNATFKDHARGIKKAPNHKYKSLKGMDPKFLRNQRFAKKYNK 49
            QKHHT RN TFK H  GI+K  NH+YKS KG+DPKFLRNQRFAKK +K
Sbjct:    4 QKHHTARNQTFKAHKNGIRKPKNHRYKSTKGLDPKFLRNQRFAKKRSK 51          
BLAST of mRNA_C-tenellus_contig96.5.1 vs. uniprot
Match: A0A5D6XQQ4_9STRA (60S ribosomal protein L29 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQQ4_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.110e-14
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    2 QKHHTGRNATFKDHARGIKKAPNHKYKSLKGMDPKFLRNQRFAKKYNK 49
            QK+HT RN T K H  GIKK  NH+Y S +G+DPKFLRNQRFAKK+NK
Sbjct:    4 QKNHTARNNTVKAHKNGIKKPKNHRYHSTRGLDPKFLRNQRFAKKFNK 51          
BLAST of mRNA_C-tenellus_contig96.5.1 vs. uniprot
Match: A0A067C325_SAPPC (60S ribosomal protein L29 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C325_SAPPC)

HSP 1 Score: 68.9 bits (167), Expect = 2.920e-14
Identity = 35/56 (62.50%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 QKHHTGRNATFKDHARGIKKAPNHKYKSLKGMDPKFLRNQRFAKKYNKSKREAPAD 57
            QK+HT RN T K H  GI+K   H+Y S KG+DPKFLRNQRFAKKYNK    A  D
Sbjct:    4 QKNHTARNQTVKAHKNGIRKPHKHRYHSTKGLDPKFLRNQRFAKKYNKKHVAAKKD 59          
BLAST of mRNA_C-tenellus_contig96.5.1 vs. uniprot
Match: A0A2D4BUG6_PYTIN (60S ribosomal protein L29 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUG6_PYTIN)

HSP 1 Score: 68.9 bits (167), Expect = 3.220e-14
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    2 QKHHTGRNATFKDHARGIKKAPNHKYKSLKGMDPKFLRNQRFAKKYNK 49
            QK+HT RN T K H  GI+K  NH+Y++ KG+DPKFLRNQR+AKKYNK
Sbjct:    4 QKNHTARNNTVKAHKNGIRKPKNHRYRTTKGLDPKFLRNQRWAKKYNK 51          
BLAST of mRNA_C-tenellus_contig96.5.1 vs. uniprot
Match: A0A4D9DAD3_9STRA (60S ribosomal protein L29 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAD3_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.240e-14
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    3 KHHTGRNATFKDHARGIKKAPNHKYKSLKGMDPKFLRNQRFAKKYNK 49
            K+HT RN +FK H  GIKK  NH  KSLKGMDPK+LRNQRFAKK+NK
Sbjct:   25 KNHTNRNQSFKAHRNGIKKPKNHVSKSLKGMDPKYLRNQRFAKKHNK 71          
BLAST of mRNA_C-tenellus_contig96.5.1 vs. uniprot
Match: A0A7I4A457_PHYPA (60S ribosomal protein L29 n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4A457_PHYPA)

HSP 1 Score: 67.4 bits (163), Expect = 1.870e-13
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    3 KHHTGRNATFKDHARGIKKAPNHKYKSLKGMDPKFLRNQRFAKKYNKS 50
            K+HT  N ++K+H  GIKK   HKY S KGMDPKFLRNQR+AKK+N+S
Sbjct:   20 KNHTAHNQSYKNHKNGIKKVKKHKYASRKGMDPKFLRNQRYAKKHNRS 67          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig96.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU40_ECTSI2.070e-2590.2060S ribosomal protein L29 n=1 Tax=Ectocarpus silic... [more]
A0A835YVJ7_9STRA1.830e-1878.4360S ribosomal protein L29 (Fragment) n=1 Tax=Tribo... [more]
A0A024T9H7_9STRA3.160e-1877.0860S ribosomal protein L29 n=5 Tax=Aphanomyces TaxI... [more]
A0A6G0WTH6_9STRA1.330e-1672.0060S ribosomal protein L29 n=1 Tax=Aphanomyces eute... [more]
A0A3R6YYP3_9STRA9.590e-1672.9260S ribosomal protein L29 n=1 Tax=Aphanomyces inva... [more]
A0A5D6XQQ4_9STRA2.110e-1468.7560S ribosomal protein L29 n=1 Tax=Pythium brassicu... [more]
A0A067C325_SAPPC2.920e-1462.5060S ribosomal protein L29 n=4 Tax=Saprolegniaceae ... [more]
A0A2D4BUG6_PYTIN3.220e-1466.6760S ribosomal protein L29 n=1 Tax=Pythium insidios... [more]
A0A4D9DAD3_9STRA3.240e-1472.3460S ribosomal protein L29 n=1 Tax=Nannochloropsis ... [more]
A0A7I4A457_PHYPA1.870e-1364.5860S ribosomal protein L29 n=4 Tax=Physcomitrium pa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002673Ribosomal protein L29ePFAMPF01779Ribosomal_L29ecoord: 2..40
e-value: 2.2E-15
score: 56.7
IPR002673Ribosomal protein L29ePANTHERPTHR1288460S RIBOSOMAL PROTEIN L29coord: 2..53
NoneNo IPR availableGENE3D6.10.140.1730coord: 1..58
e-value: 7.4E-18
score: 66.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR12884:SF060S RIBOSOMAL PROTEIN L29coord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig96contigC-tenellus_contig96:20847..22500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig96.5.1mRNA_C-tenellus_contig96.5.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig96 20847..22500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig96.5.1 ID=prot_C-tenellus_contig96.5.1|Name=mRNA_C-tenellus_contig96.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=59bp
QQKHHTGRNATFKDHARGIKKAPNHKYKSLKGMDPKFLRNQRFAKKYNKS
KREAPADA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002673Ribosomal_L29e