prot_C-tenellus_contig9580.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9580.3.1
Unique Nameprot_C-tenellus_contig9580.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length504
Homology
BLAST of mRNA_C-tenellus_contig9580.3.1 vs. uniprot
Match: A0A835YXQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXQ5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.240e-7
Identity = 78/287 (27.18%), Postives = 124/287 (43.21%), Query Frame = 0
Query:  185 GMLTVTDSANVKLSKILPGDGSGVLTIADHAQMQSSATTSGNLTVKGVQLVI-NGGSMAGWTIVTVESGGILRLSSNGNAKPETGGVPLTPNGTYVFDMLVIADGGRVDVAPASNVLSLVNNTSLVSIRAGTIMVASGGILTGNGYGYPATERDT-SALDEQNIPYSGTASNGRNGGAGGGHAGAGAN-GYLNSRPGGAYDSTFAPTQSGGGGGAGAWGSXXXXXSAIHLVTTG--DLIVQGQVSVDGESATVGXXXXXXXXGSLWVDCGGLLIGEGIISAKGGDGD 466
            G  T++  A++ ++ +  GDG+GV+T+   A + S+     +L +  V L + +GG++AGW  + V +GG+L+LSS             T  G + F  + +A GG + V  ++   +  +  + V++RAG+I         G   G     R   +A                         G GA  G               P   G      A+G      +A+ LVTTG  D+ + G + + G  A     XXXXX GS+W+  GG L G G ++A GG GD
Sbjct: 2470 GSATLSTVASMAVTSVTAGDGTGVVTVLSGATL-SAQPAGADLVIDNVTLEVEDGGALAGWGALIVRAGGVLQLSSTSIG---------TGPGAFDFTTVSVAAGGIIRVVASA--AATTSTATAVTLRAGSINXXXXXXXXGXXTGXXXXSRTAVAAAXXXXXXXXXDXGXXXXXXXXXXXXGYGAEYGAXXXXXXXXXXXXXXPQHIGXXXXXXAFGDGGPGGAAVKLVTTGGGDITIDGIIDMSGAPAATATGXXXXXGGSIWLSAGGALRGSGALTANGGSGD 2744          
BLAST of mRNA_C-tenellus_contig9580.3.1 vs. uniprot
Match: A0A8B8BDG6_CRAVI (LOW QUALITY PROTEIN: uncharacterized protein LOC111109250 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BDG6_CRAVI)

HSP 1 Score: 57.8 bits (138), Expect = 5.550e-5
Identity = 61/208 (29.33%), Postives = 91/208 (43.75%), Query Frame = 0
Query:  316 IMVASGGILTGNGYGYPATERDTSALDEQNIPYSGTASNGRNGGAGGGHAGAGANGYLNSRPGGAYDSTFAPTQSGGGGGAGA------WGSXXXXXSAI----------HLVTTGDLI-VQGQVSVDGES--ATVGXXXXXXXXGSLWVDCGGLLIGEGIISAKGGDGDGGLEADSRLFGGAGSGGRILLLSKDTSSFLGQVKAMGG 504
            + V SGG++   G GY             N+           GG+G GH G+G  G  +   G  YDS + P   G  GG G       +G        +          H+   G  + + G +SVDGES  +  G        GS+W+ C   +IG G+++A+GGDG+     DS   GG  +GGRI + S++T+     ++A GG
Sbjct: 3548 LAVFSGGLVNLVGAGYSDHSHTHPCYGTGNVA----------GGSGAGHGGSGGRGSFSQTVGLGYDSMYTPNTYGCPGGYGKLRDYLYFGDEPYGNKVVDGIIGGSGGGHIAINGRHVDIDGTISVDGESPDSRTGQGAGGGSGGSIWIVCE-EIIGHGLLTARGGDGN----KDSIAQGGGXAGGRISVQSRNTNKLNITMQAYGG 3740          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9580.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YXQ5_9STRA1.240e-727.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8B8BDG6_CRAVI5.550e-529.33LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9580contigC-tenellus_contig9580:4347..5858 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9580.3.1mRNA_C-tenellus_contig9580.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9580 4347..5858 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9580.3.1 ID=prot_C-tenellus_contig9580.3.1|Name=mRNA_C-tenellus_contig9580.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=504bp
GSGGGASLSGEGGEGGGVIILEVSYEGELWNDGNITADGNSGGCPGGGGG
AGGSVLVKLAGGGRLSGSGMVTANGGNACSDGSLGGGGSGGRVAIFAWDA
DSFLGSLLAEGGWQGNSDLVLPAAGTVLTNFTSGAKEGTTLKVRNTNAYA
LGVYSTKGITLLNESMESSSSIDTNGVKLDVQEGGMLTVTDSANVKLSKI
LPGDGSGVLTIADHAQMQSSATTSGNLTVKGVQLVINGGSMAGWTIVTVE
SGGILRLSSNGNAKPETGGVPLTPNGTYVFDMLVIADGGRVDVAPASNVL
SLVNNTSLVSIRAGTIMVASGGILTGNGYGYPATERDTSALDEQNIPYSG
TASNGRNGGAGGGHAGAGANGYLNSRPGGAYDSTFAPTQSGGGGGAGAWG
SGGAGGSAIHLVTTGDLIVQGQVSVDGESATVGSGGGGGAGGSLWVDCGG
LLIGEGIISAKGGDGDGGLEADSRLFGGAGSGGRILLLSKDTSSFLGQVK
AMGG
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