prot_C-tenellus_contig9498.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9498.2.1
Unique Nameprot_C-tenellus_contig9498.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length58
Homology
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BLAST of mRNA_C-tenellus_contig9498.2.1 vs. uniprot
Match: A0A6H5KAU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU5_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 5.250e-8
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 0 
Query:   17 VGSITGSHVCRACGGPRFKRNVCARCGANANDVRG 51
            +  + G  VCRACGGPRF R VCA+CGANAN  RG
Sbjct:  210 MAELGGGRVCRACGGPRFGRTVCAKCGANANSWRG 244
[Close]
BLAST of mRNA_C-tenellus_contig9498.2.1 vs. uniprot
Match: D7FMH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH1_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 6.990e-8
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 0 
Query:   17 VGSITGSHVCRACGGPRFKRNVCARCGANANDVRG 51
            +  + G  VCRACGGPRF R VCA+CGANAN  RG
Sbjct:  405 MAELGGGRVCRACGGPRFGRTVCAKCGANANSWRG 439
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9498.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAU5_9PHAE5.250e-865.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMH1_ECTSI6.990e-865.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9498contigC-tenellus_contig9498:5115..5288 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9498.2.1mRNA_C-tenellus_contig9498.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9498 5028..5288 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9498.2.1 ID=prot_C-tenellus_contig9498.2.1|Name=mRNA_C-tenellus_contig9498.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=58bp
AVFEVNGPQKSDYRDEVGSITGSHVCRACGGPRFKRNVCARCGANANDVR
GMNSPTT*
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