prot_C-tenellus_contig9490.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9490.4.1
Unique Nameprot_C-tenellus_contig9490.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length148
Homology
BLAST of mRNA_C-tenellus_contig9490.4.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 3.040e-22
Identity = 47/77 (61.04%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    3 SWYIEKLLPAVKEKMPWAETLDLIVQQDGAAPHTANDIPRKLNRVGKNDGWNIKLETQLAQSPDLNINDLGFFNSLK 79
             WYI+ LLPA+KEKMPW  +  ++VQQDGA+PHT    P  LN  G   GW ++L TQ AQSPDLNINDLG F SLK
Sbjct:  273 DWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLK 349          
BLAST of mRNA_C-tenellus_contig9490.4.1 vs. uniprot
Match: A0A7S3GU94_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU94_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 3.760e-22
Identity = 44/127 (34.65%), Postives = 73/127 (57.48%), Query Frame = 0
Query:   14 KEKMPWAETLDLIVQQDGAAPHTANDIPRKLNRVGKNDGWNIKLETQLAQSPDLNINDLGFFNSLKAVFGRKHLGT--MENMAAGVRTLFDEYPAETLERVWQSLFSRYNQVLAALRGNNFELEHKG 138
            KEKMPW     L +Q DGA PHTA  +  +++     +GW+I +  Q AQSPDLN+ DLG F+SLK    +   G   ++ +   VR ++ +Y  +TL+++W    + + +++ A+  N ++  H G
Sbjct:    4 KEKMPWMRNRRLKIQHDGARPHTAGGLEDEVHATASTEGWHITMVRQRAQSPDLNVMDLGLFHSLKVQVIQLKDGAHNIDELIQKVRVVYQQYSRDTLDQIWGHQVACWTEIMRAMGSNQYKAPHHG 130          
BLAST of mRNA_C-tenellus_contig9490.4.1 vs. uniprot
Match: UPI000CD83630 (uncharacterized protein LOC111906923 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD83630)

HSP 1 Score: 95.5 bits (236), Expect = 6.370e-22
Identity = 47/137 (34.31%), Postives = 84/137 (61.31%), Query Frame = 0
Query:    3 SWYIEKLLPAVKEKMPWAETLDLIVQQDGAAPHT-ANDIPRKLNRVGKNDGWNIKLETQLAQSPDLNINDLGFFNSLKAVFGRKHLGTMENMAAGVRTLFDEYPAETLERVWQSLFSRYNQVLAALRGNNFELEHKG 138
            SW+IEK+LP ++ K P +    + +QQD A PH   ND       V  +DG++I+L  Q + SPDLN+ DLGFF +++++  ++ LGT++ +   V+T F++  ++ L  V+ +L +   +++    GNN+++ H G
Sbjct:   17 SWFIEKVLPDIRAKWPRSHVGPIFIQQDNAKPHIDVND--NDFLEVASSDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTSFEKMQSQQLNNVFLTLQTCMMEIIRVQGGNNYQIPHIG 151          
BLAST of mRNA_C-tenellus_contig9490.4.1 vs. uniprot
Match: UPI000E1B95F2 (uncharacterized protein LOC107280909 n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=UPI000E1B95F2)

HSP 1 Score: 100 bits (249), Expect = 8.170e-22
Identity = 54/135 (40.00%), Postives = 79/135 (58.52%), Query Frame = 0
Query:    3 SWYIEKLLPAVKEKMPWAET-LDLIVQQDGAAPHTANDIPRKLNRVGKNDGWNIKLETQLAQSPDLNINDLGFFNSLKAVFGRKHLGTMENMAAGVRTLFDEYPAETLERVWQSLFSRYNQVLAALRGNNFELEH 136
            S+ IEK+LPAV+ K P  +    + +QQD A PH A D  R      K DG+NIKL  Q A SPDLN+ DLGFFNS++++  +    T E + A +   F++YP     R++ SL +   +V+  L  N+++L H
Sbjct:  484 SFMIEKVLPAVRAKWPREDAGKPIYIQQDNARPHIAPD-DRMFCEAAKQDGFNIKLVCQPANSPDLNVLDLGFFNSIQSIQYKSASTTTEELVAAIDRAFEDYPVRLSNRIFLSLHACMREVIEVLGDNSYDLPH 617          
BLAST of mRNA_C-tenellus_contig9490.4.1 vs. uniprot
Match: A0A484MSU7_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484MSU7_9ASTE)

HSP 1 Score: 94.7 bits (234), Expect = 2.280e-21
Identity = 54/138 (39.13%), Postives = 76/138 (55.07%), Query Frame = 0
Query:    1 MVSWYIEKLLPAVKEKMPWAETLDLIVQQDGAAPHTANDIPRKLNRVGKNDGWNIKLETQLAQSPDLNINDLGFFNSLKAVFGRKHLGTMENMAAGVRTLFDEYPAETLERVWQSLFSRYNQVLAALRGNNFELEHKG 138
            M    +EKLLP +KEK P   T D+I+QQD A PH   + P  +    + D WNIKL+ Q   SPDLN+ DLG+F S+ A+  ++    +E++   V T F     E L  V+ +  S   +VL    GNNF++ H G
Sbjct:   39 MKKMLLEKLLPTIKEKWP-GPTRDVIIQQDNAKPHVDVNDPEFVQAAQEGD-WNIKLQFQPPNSPDLNVLDLGYFRSIDAIQDQEAPRKLEDLITAVTTSFAALTPEKLNNVFLTCQSVMGEVLKHKGGNNFKIPHMG 174          
BLAST of mRNA_C-tenellus_contig9490.4.1 vs. uniprot
Match: Q10SS9_ORYSJ (Transposon protein, putative, Mariner sub-class n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q10SS9_ORYSJ)

HSP 1 Score: 98.6 bits (244), Expect = 4.010e-21
Identity = 53/135 (39.26%), Postives = 78/135 (57.78%), Query Frame = 0
Query:    3 SWYIEKLLPAVKEKMPWAET-LDLIVQQDGAAPHTANDIPRKLNRVGKNDGWNIKLETQLAQSPDLNINDLGFFNSLKAVFGRKHLGTMENMAAGVRTLFDEYPAETLERVWQSLFSRYNQVLAALRGNNFELEH 136
            S+ IEK+LPAV+ K P  +    + +QQD A PH A D  R      K DG+NIKL  Q   SPDLN+ DLGFFNS++++  +    T E + A +   F++YP     R++ SL +   +V+  L  N+++L H
Sbjct:  484 SFMIEKVLPAVRAKWPREDAGKPIYIQQDNARPHIAPD-DRMFCEAAKQDGFNIKLVCQPTNSPDLNVLDLGFFNSIQSIQYKSVSTTTEELVAAIDRAFEDYPVRLSNRIFLSLHACMREVIEVLGDNSYDLPH 617          
BLAST of mRNA_C-tenellus_contig9490.4.1 vs. uniprot
Match: UPI0007EF40B3 (uncharacterized protein LOC108194535 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF40B3)

HSP 1 Score: 97.4 bits (241), Expect = 6.380e-21
Identity = 53/136 (38.97%), Postives = 73/136 (53.68%), Query Frame = 0
Query:    6 IEKLLPAVKEKMPWAETLDLIVQQDGAAPHTANDIPRKLNRVGKNDGWNIKLETQLAQSPDLNINDLGFFNSLKAVFGRKHLGTMENMAAGVRTLFDEYPAETLERVWQSLFSRYNQVLAALRGNNFELEHKGAGK 141
            +EK++PA+K K P      +++QQD A PH  N        V K+DG+NI L  Q A SPDLNINDLGFF  ++ +   K   T+  +   V   ++E    TL  VW SL     ++L     NN++L H G GK
Sbjct:  289 LEKIIPAIKAKWPLDCNRPIVIQQDNARPHICN-TDLDFIEVAKSDGFNITLANQPANSPDLNINDLGFFRVIQGLQHEKAPTTVCELVGAVLEAYEEVSDSTLNHVWLSLMGCMTEILRKDGNNNYKLPHIGKGK 423          
BLAST of mRNA_C-tenellus_contig9490.4.1 vs. uniprot
Match: UPI001ADC3EA5 (uncharacterized protein LOC107303866 isoform X1 n=2 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADC3EA5)

HSP 1 Score: 94.0 bits (232), Expect = 3.470e-20
Identity = 55/136 (40.44%), Postives = 77/136 (56.62%), Query Frame = 0
Query:    3 SWYIEKLLPAVKEKMPWAETLD--LIVQQDGAAPHTANDIPRKLNRVGKNDGWNIKLETQLAQSPDLNINDLGFFNSLKAVFGRKHLGTMENMAAGVRTLFDEYPAETLERVWQSLFSRYNQVLAALRGNNFELEH 136
            ++ IEK+L AV+ K P  E  D  + +QQD A PH A D  R      K D +NIKL  Q A SPDLN+ DLGFFNS++A+  +    T E + AGV   F +Y      R++ SL +   +++    GN+F+L H
Sbjct:  151 NFMIEKVLLAVRAKWP-REDADKPIYIQQDNARPHIAPD-DRMFCEAAKQDNFNIKLVCQPANSPDLNVLDLGFFNSIQAIQYKSTSTTTEELVAGVDRAFQDYSVRRSNRIFLSLHACMREIIKVHGGNSFDLPH 284          
BLAST of mRNA_C-tenellus_contig9490.4.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 5.680e-20
Identity = 51/134 (38.06%), Postives = 79/134 (58.96%), Query Frame = 0
Query:    6 IEKLLPAVKEKMP-WAETLDLIVQQDGAAPHTANDIPRKLNRVGKNDGWNIKLETQLAQSPDLNINDLGFFNSLKAVFGRKHLGTMENMAAGVRTLFDEYPAETLERVWQSLFSRYNQVLAALRGNNFELEHKG 138
            +EK+LPA+ EK P  + T ++ +Q+D A PH A  I  ++     + GWNI ++TQ   SPD+N+ DLGFFNS++++  +K    ++++ A V   FDE   ETL  V+ SL +     L     NN++L H G
Sbjct:  367 LEKVLPAIYEKWPRGSSTPEIFIQEDNAKPHKAT-IREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDIDHLIANVEEAFDECKRETLNNVFLSLQACMEASLGVDGDNNYKLPHMG 499          
BLAST of mRNA_C-tenellus_contig9490.4.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 94.0 bits (232), Expect = 1.020e-19
Identity = 46/137 (33.58%), Postives = 82/137 (59.85%), Query Frame = 0
Query:    3 SWYIEKLLPAVKEKMPWAETLDLIVQQDGAAPHT-ANDIPRKLNRVGKNDGWNIKLETQLAQSPDLNINDLGFFNSLKAVFGRKHLGTMENMAAGVRTLFDEYPAETLERVWQSLFSRYNQVLAALRGNNFELEHKG 138
            SW IEK+LP ++ K P +    + +QQD A PH   ND   +       DG++I+L  Q + SPDLN+ DLGFF +++++  ++ LGT++ +   V+T F++  ++ L  V+ +L +   +++    GNN+++ H G
Sbjct:  270 SWLIEKVLPDIRAKWPRSHVGPIFIQQDNAKPHIDVND--NEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIG 404          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9490.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE3.040e-2261.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3GU94_9STRA3.760e-2234.65Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
UPI000CD836306.370e-2234.31uncharacterized protein LOC111906923 n=1 Tax=Lactu... [more]
UPI000E1B95F28.170e-2240.00uncharacterized protein LOC107280909 n=2 Tax=Oryza... [more]
A0A484MSU7_9ASTE2.280e-2139.13Uncharacterized protein n=2 Tax=Cuscuta campestris... [more]
Q10SS9_ORYSJ4.010e-2139.26Transposon protein, putative, Mariner sub-class n=... [more]
UPI0007EF40B36.380e-2138.97uncharacterized protein LOC108194535 n=1 Tax=Daucu... [more]
UPI001ADC3EA53.470e-2040.44uncharacterized protein LOC107303866 isoform X1 n=... [more]
A0A448ZNT1_9STRA5.680e-2038.06Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
UPI000CD873B31.020e-1933.58uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 2..133
e-value: 9.4E-23
score: 83.0
NoneNo IPR availablePANTHERPTHR47169OS01G0541250 PROTEINcoord: 6..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9490contigC-tenellus_contig9490:3369..3812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9490.4.1mRNA_C-tenellus_contig9490.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9490 3369..3812 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9490.4.1 ID=prot_C-tenellus_contig9490.4.1|Name=mRNA_C-tenellus_contig9490.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=148bp
MVSWYIEKLLPAVKEKMPWAETLDLIVQQDGAAPHTANDIPRKLNRVGKN
DGWNIKLETQLAQSPDLNINDLGFFNSLKAVFGRKHLGTMENMAAGVRTL
FDEYPAETLERVWQSLFSRYNQVLAALRGNNFELEHKGAGKSGSTCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf