prot_C-tenellus_contig9277.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9277.2.1
Unique Nameprot_C-tenellus_contig9277.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length312
Homology
BLAST of mRNA_C-tenellus_contig9277.2.1 vs. uniprot
Match: A0A6H5L969_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L969_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 2.250e-50
Identity = 111/264 (42.05%), Postives = 157/264 (59.47%), Query Frame = 0
Query:   57 RVAVVVMPSPPVVSGPSTRIERLTTIQETWGGDFLLGGRGKNRLVIVMDESESETAGALMTLWDAEEPHFLEYQNG---GKKKFPSW---------DGSLASGRVLLVPGEFS---VNGDTRMKYVLEQVHALHDPDFLFFCNEHTFLIPENLQCFVDNLEPSKPVYLGHRFRKKGTVRK-QADLNSGAAGFILSRSSLSLLHSEW----GRFRLNSGG---EPRMLEADGIGRVEGDHLPAQVCVASTQWEKDNPGVFYWACM 297
            +  VVVMPSPP+VSGPSTRI+R  TI++TWG D +    G+N +V V+DE+++ T    +  W A E     Y +G     K  P+          +    + RVL+VP + +    +GD R++YVL ++  ++DP FLF+CNEHT++I ENL C+  +L+PS PVYLG+RFR++    + +A LNSGAAGFILSR SLSLLH  W    G  R +S G   +     +DG G   G   P   CVA + +E+ NPG+    C+
Sbjct:   74 KTVVVVMPSPPMVSGPSTRIDRFQTIRDTWGQDLM--DAGENSVVFVVDEADAGTVEEALGTWGALETSPFPYPSGEDINSKGLPTRHHRTLEQQREQGSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLLCYTRSLDPSDPVYLGNRFRRESERDQGKALLNSGAAGFILSRGSLSLLHQAWRDGEGGGRADSLGGSVDHSGGHSDGKGEERG---PPTECVAKSNYERGNPGITLARCL 332          
BLAST of mRNA_C-tenellus_contig9277.2.1 vs. uniprot
Match: D7FS30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS30_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 3.040e-37
Identity = 92/243 (37.86%), Postives = 123/243 (50.62%), Query Frame = 0
Query:   63 MPSPPVVSGPSTRIERLTTIQETWGGDFLLGGRGKNRLVIVMDESESETAGALMTLWDAEEPHFLEYQNGGKKKFPSWDGSLASGRVLLVPGEFSVNGDTRMKYVLEQVHALHDPDFLFFCNEHTFLIPENLQCFVDNLEPSKPVYLGHRFRKKGTVRK-QADLNSGAAGFILSRSSLSLLHSEW----GRFRLNSGG---EPRMLEADGIGRVEGDHLPAQVCVASTQWEKDNPGVFYWACM 297
            MPSPP+VSGPSTRI+RL TI++TWG D +    G+NR                                                                  YVL +++ ++DPDFLF+CNEHT++I ENLQC+  +L+PS PVYLG+RFR++G   + +A LNSGAAGF+LSR SLSLLH  W    G  R +S G   +     +DG G   G   P   CVA + +E+ NPG+    C+
Sbjct:    1 MPSPPMVSGPSTRIDRLQTIRDTWGQDLM--DAGENR------------------------------------------------------------------YVLARIYEIYDPDFLFYCNEHTYVIAENLQCYTRSLDPSDPVYLGNRFRREGEKNQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEGEERG---PPTECVAKSNYERGNPGITLARCL 172          
BLAST of mRNA_C-tenellus_contig9277.2.1 vs. uniprot
Match: B8C1S4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1S4_THAPS)

HSP 1 Score: 92.0 bits (227), Expect = 2.790e-17
Identity = 67/234 (28.63%), Postives = 107/234 (45.73%), Query Frame = 0
Query:   68 VVSGPSTRIERLTTIQETWGGDFLLGGRGKNRLVIVMDESESETAGALMTLWDAEEPHFLEYQNGGKKKFPSWDGSLASGRVLLVPGEFSVN-GDTRMKYVLEQVHALHDPDFLFFCNEHTFLIPENLQCFVDNLEPSKPVYLGHRFRKKGTVRKQADLNSGAAGFILSRSSLSLLHSEWGRFRLNSGGEPRMLEADGIGRVEGDHLPAQVCVAS--TQWEKDNPGVFYWACMD 298
            V+  P  R  RL  I +TWG                       ++ A+  + DA+     EY +G  +   +   S +  ++LLVP E + + G  R+++VL  +H   +P+F FF N+HTF++P++L  F+   + SK +Y GH  + K    K+   NSGAAG++LSRS++  L  EW +                         P   C AS  ++W + NPG+    C D
Sbjct:   92 VMPRPEARPLRLDNIAKTWG----------------------PSSHAIYVVHDAD-----EYSDGANRIVGTSSNSNSYPQLLLVPNEITPDQGVQRLEHVLRTIHKEINPEFAFFVNDHTFVLPDHLCRFLKEHDSSKDLYAGHPLKGK----KETVFNSGAAGYVLSRSTVEKLIDEWDK-------------------------PDSQCSASNVSKWLQSNPGLLTATCFD 269          
BLAST of mRNA_C-tenellus_contig9277.2.1 vs. uniprot
Match: A0A1E7FBI3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBI3_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 7.660e-16
Identity = 62/191 (32.46%), Postives = 91/191 (47.64%), Query Frame = 0
Query:   57 RVAVVVMPSPPVVSGPSTRIERLTTIQETWGGDFLLGGRGKNRLVIVMDESESETAGALMTLWDAEEPHFLEYQNGGKKKFPSWDGSLASGRVLLVPGEFSVN-GDTRMKYVLEQVHALHDPDFLFFCNEHTFLIPENLQCFVDNLEPSKPVYLGHRFRKKGTVRKQADLNSGAAGFILSRSSLSLLHSEW 246
            R   VVMPS   V  P+ R  RL +I ETWGG          R V V          A   L +  +P            +P         ++++VP    V+ G  R+ YV+  V    +PDF FF N+HTF+IPE+L  ++++  P++ +Y GH  +   +V      NSGAAG+ILSR ++  L  +W
Sbjct:   30 RSVTVVMPS---VVNPNRRTLRLDSISETWGGSA--------RAVYVAHNISEYPEAAHAVLSENHKPE-------DPYSYP---------QLMVVPNSIGVDDGVERLMYVIRMVFEKINPDFAFFVNDHTFVIPEHLCKYLEHKNPNEDMYHGHAMKNDNSV-----FNSGAAGYILSRETMKKLVDQW 188          
BLAST of mRNA_C-tenellus_contig9277.2.1 vs. uniprot
Match: A0A1Z5JKF7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKF7_FISSO)

HSP 1 Score: 87.4 bits (215), Expect = 1.280e-15
Identity = 61/191 (31.94%), Postives = 89/191 (46.60%), Query Frame = 0
Query:   57 RVAVVVMPSPPVVSGPSTRIERLTTIQETWGGDFLLGGRGKNRLVIVMDESESETAGALMTLWDAEEPHFLEYQNGGKKKFPSWDGSLASGRVLLVPGEFSVN-GDTRMKYVLEQVHALHDPDFLFFCNEHTFLIPENLQCFVDNLEPSKPVYLGHRFRKKGTVRKQADLNSGAAGFILSRSSLSLLHSEW 246
            R   VVMPS   V  P  R  RL +I +TWG           R + V+        G+ +T  + +EP                  + +  + LL+P    V+ G  R+ Y +  +H   DPDF FF N+HTF+IPE+L  ++D L     +Y GH  R      K+   NSGAAG++LSR ++  L  +W
Sbjct:  106 RFVTVVMPS---VVNPKGRGLRLDSIHKTWGPYA--------RAIFVLHNQTEFPQGSHLTFSEEKEP----------------SDTFSYPQTLLLPDMIGVDDGLPRLFYTIRAIHERVDPDFCFFVNDHTFVIPEHLCTYLDGLNAEDDLYAGHALRNG----KEDVFNSGAAGYLLSRGTMKKLMQKW 265          
BLAST of mRNA_C-tenellus_contig9277.2.1 vs. uniprot
Match: A0A7S2UNB6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNB6_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.530e-15
Identity = 72/248 (29.03%), Postives = 112/248 (45.16%), Query Frame = 0
Query:   57 RVAVVVMPSPPVVSGPSTRIERLTTIQETWGGDFLLGGRGKNRLVIVMDESESETAGALMTLWDAEEPHFLEYQNGGKKKFP--SWDGSLASGRVLLVPGEFSVN-GDTRMKYVLEQV-HALHDPDFLFFCNEHTFLIPENLQCFVDNLEPSKPVYLGHRFRKKGTVRKQADLNSGAAGFILSRSSLSLLHSEWGRFRLNSGGEPRMLEADGIGRVEGDHLPAQVCVAST--QWEKDNPGVFYWACMD 298
            R   VVMPS   V  P+ R +RL +I ETWG          +R V  + ++                    EY  G ++ F   S D S     VL+VP   S + G  R+++V++ V  +  DPDF FF N+HTF+IPE+L  ++  L P+  +Y GH  ++  +       NSGAAG++LSR+++  L  +W                        +H     C+A+   +W + NPG+    C+ 
Sbjct:  151 RFITVVMPS---VVNPNGRRKRLDSIAETWGAS--------SRAVYAVHDT-------------------AEYPEGRERVFEEVSPDTSTVFPMVLVVPDSISPDEGVPRLQHVIKTVSESALDPDFAFFVNDHTFVIPEHLCEYLSGLNPTDELYAGHALKENDS---DYAFNSGAAGYVLSRTTMRHLVQKW------------------------EHEKDSECLATNAPKWFQGNPGLVTARCLQ 341          
BLAST of mRNA_C-tenellus_contig9277.2.1 vs. uniprot
Match: A0A7S3PZJ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZJ3_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.240e-15
Identity = 63/226 (27.88%), Postives = 99/226 (43.81%), Query Frame = 0
Query:   29 FTTCRYFIPWGVSLTHFP------QDLLLTIPTARVAVVVMPSPPVVSGPSTRIERLTTIQETWGGDFLLGGRGKNRLVIVMDESESETAGALMTLWDAEEPHFLEYQNGGKKKFPSWDGSLASGRVLLVPGEFSVN--GDTRMKYVLEQVHALHDPDFLFFCNEHTFLIPENLQCFVDNLEPSKPVYLGHRFRKKGTVRKQADLNSGAAGFILSRSSLSLLHSEW 246
            F TC +F+     L +        QD        R   VV+PS   V     R +RL +I ETWG                      + A A+               + GK+  P+     +  + +LVP E +    G  R+KYV+EQ++  ++PDF FF N+HT++IP++   F+    P++ +Y GH  +  G   +    NSGA+G+ LSR ++  L   W
Sbjct:   48 FCTCAHFLTHRQDLGNLETADTENQDASSASLNPRYVTVVLPS---VVNEGGRFKRLRSIDETWG----------------------QAANAIYVY------------HPGKEYTPTSSSKSSYPQTMLVPSEVAAEDEGVPRLKYVIEQIYHKYNPDFAFFGNDHTYVIPQHACDFLKGKNPNENMYAGHPMKPGG---EDFAFNSGASGYFLSRETMRFLTKRW 233          
BLAST of mRNA_C-tenellus_contig9277.2.1 vs. uniprot
Match: B7FST7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FST7_PHATC)

HSP 1 Score: 83.2 bits (204), Expect = 1.330e-14
Identity = 69/245 (28.16%), Postives = 108/245 (44.08%), Query Frame = 0
Query:   57 RVAVVVMPSPPVVSGPSTRIERLTTIQETWGGDFLLGGRGKNRLVIVMDESESETAGALMTLWDA--EEPHFLEYQNGGKKKFPSWDGSLASGRVLLVPGEFSVN-GDTRMKYVLEQVHALHDPDFLFFCNEHTFLIPENLQCFVDNLEPSKPVYLGHRFRKKGTVRKQADLNSGAAGFILSRSSLSLLHSEWGRFRLNSGGEPRMLEADGIGRVEGDHLPAQVCVASTQWEKDNPGVFYWACMD 298
            R   VVMPS   V     R++RL  IQ+TWG        G   + +V + SE   A   +   ++  E+P+                   A  ++LLVP     N G  R+ + +  V    DPDF FF N+HTF+IPE+L  ++ +  P++ +Y GH  +    V      NSGAAG++LSRS++  + + W     +   +P                      A+T W + NPG+    C++
Sbjct:  110 RYVTVVMPS---VVNQKGRMDRLEAIQDTWGP-------GARSIFVVHNISEFPQASHAVVSEESLPEDPY-------------------AYPQLLLVPPGIGFNDGLPRLYHTIRTVFEKVDPDFAFFVNDHTFVIPEHLCKYLKDRSPNEDLYAGHAMKNGKLV-----FNSGAAGYVLSRSTMRKMMNTWDERDPDCWVDPE---------------------AATSWLQGNPGLATVQCLE 299          
BLAST of mRNA_C-tenellus_contig9277.2.1 vs. uniprot
Match: A0A448YUP3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUP3_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.030e-13
Identity = 58/191 (30.37%), Postives = 94/191 (49.21%), Query Frame = 0
Query:   57 RVAVVVMPSPPVVSGPSTRIERLTTIQETWGGDFLLGGRGKNRLVIVMDESESETAGALMTLWDAEEPHFLEYQNGGKKKFPSWDGSLASGRVLLVP-GEFSVNGDTRMKYVLEQVHALHDPDFLFFCNEHTFLIPENLQCFVDNLEPSKPVYLGHRFRKKGTVRKQADLNSGAAGFILSRSSLSLLHSEW 246
            R   VVMPS   V  P  R +RL +IQETWG                       +A A+  + D EE     +    + + P  +   +  +++LVP G  + +G  R+ + ++ V    +PDF FF N+HT++IPE+L  ++++ +P++ +Y GH              NSGAAG+ILSR ++  L  +W
Sbjct:   27 RTVTVVMPS---VVNPKGRTKRLKSIQETWGA----------------------SARAIYVVHDIEEFPVASHAVISESRTP--EDPYSYPQLMLVPDGIGAEDGVPRLIHTVQTVFEKVNPDFAFFVNDHTYVIPEHLCNYLEHKKPTEDMYHGHALHDGNNA-----FNSGAAGYILSRETMRRLVDQW 185          
BLAST of mRNA_C-tenellus_contig9277.2.1 vs. uniprot
Match: A0A7S1ZC17_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZC17_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.870e-13
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:  148 RVLLVPGEFSVN-GDTRMKYVLEQVHALHDPDFLFFCNEHTFLIPENLQCFVDNLEPSKPVYLGHRFRKKGTVRKQADLNSGAAGFILSRSSLSLLHSEW 246
            R+LL+P   +   G  R++YV++ +  + DPDF FF N+HTF+IPE+L  ++    P + +Y GH  + +G        NSGAAG+ILSR ++  L  +W
Sbjct:   12 RLLLIPSFITEEKGVERLQYVIKTISEVIDPDFAFFVNDHTFVIPEHLCDYLIGSNPDEDIYAGHAMKDRGN---DFAFNSGAAGYILSRVTMKRLGKKW 108          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9277.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5L969_9PHAE2.250e-5042.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS30_ECTSI3.040e-3737.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B8C1S4_THAPS2.790e-1728.63Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1E7FBI3_9STRA7.660e-1632.46Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A1Z5JKF7_FISSO1.280e-1531.94Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2UNB6_9STRA1.530e-1529.03Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3PZJ3_9STRA2.240e-1527.88Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
B7FST7_PHATC1.330e-1428.16Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A448YUP3_9STRA1.030e-1330.37Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1ZC17_9STRA1.870e-1339.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.550.50coord: 67..256
e-value: 7.7E-13
score: 50.2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 291..309
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..290
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 310..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9277contigC-tenellus_contig9277:1565..3327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9277.2.1mRNA_C-tenellus_contig9277.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9277 1544..4458 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9277.2.1 ID=prot_C-tenellus_contig9277.2.1|Name=mRNA_C-tenellus_contig9277.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=312bp
MVHQIGLSPSRHRPPWRGLGIIFLSFATFTTCRYFIPWGVSLTHFPQDLL
LTIPTARVAVVVMPSPPVVSGPSTRIERLTTIQETWGGDFLLGGRGKNRL
VIVMDESESETAGALMTLWDAEEPHFLEYQNGGKKKFPSWDGSLASGRVL
LVPGEFSVNGDTRMKYVLEQVHALHDPDFLFFCNEHTFLIPENLQCFVDN
LEPSKPVYLGHRFRKKGTVRKQADLNSGAAGFILSRSSLSLLHSEWGRFR
LNSGGEPRMLEADGIGRVEGDHLPAQVCVASTQWEKDNPGVFYWACMDWV
WSHLLIMLVRW*
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