prot_C-tenellus_contig9268.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9268.1.1
Unique Nameprot_C-tenellus_contig9268.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length200
Homology
BLAST of mRNA_C-tenellus_contig9268.1.1 vs. uniprot
Match: D7FUL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL6_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 2.140e-31
Identity = 72/162 (44.44%), Postives = 105/162 (64.81%), Query Frame = 0
Query:   22 ILRLIAVMVVASALSAWFNSLKIKRMILMFLHWVSGFGYASSQLIMSIMVINCWST-NELKPFIYTLKFLELWSVNVFSLSNLALTINLAHIVEGYKKCQRVSGE-DSQYLAKVVVVVGFLMAMASVPFWDELLVTGGYFWVASTGQDT----TIFPFGAAQ 177
            +LRL+A+++  S L  W +S +  RM + FLHW SG  Y  SQ IMS+MV+NCWS+ ++  PFIY LKFLEL ++N++S+S+LA+ I +A IV+ + K +RV     S   A V +V+  L  + S  FW+ +L+TGGYFWV +TG ++        FGA Q
Sbjct:    1 MLRLVALVISISVLFPWLSSERRGRMRIFFLHWASGVMYVMSQFIMSVMVLNCWSSRDDSGPFIYFLKFLELTALNLWSISSLAIAILIASIVQSFVKLRRVPTMIGSTRAACVCLVLAILATVLSAVFWNGVLITGGYFWVTNTGNESHGRWISLSFGATQ 162          
BLAST of mRNA_C-tenellus_contig9268.1.1 vs. uniprot
Match: A0A6H5JRD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD9_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 6.480e-29
Identity = 71/170 (41.76%), Postives = 105/170 (61.76%), Query Frame = 0
Query:   22 ILRLIAVMVVASALSAWFNSLKIKRMILMFLHWVSGFGYASSQLIMSIMVINCWST-NELKPFIYTLKFLELWSVNVFSLSNLALTINLAHIVEGYKKCQRVSGE-DSQYLAKVVVVVGFLMAMASVPFWDELLVTGGYFWVASTGQDT----TIFPFGAAQASPEIIVS 185
            +LRL+A+++  S L  W +S +  RM + FLHW SG  Y  SQ IMS+MV+NCWS+ ++  PFIY LKF EL  +N++S+S+LA+ I +A IV+ +   +RV     S   A V VV+  L  + S  FW+ +L+TGGYFWV +T  ++        FGA Q    I+++
Sbjct:    1 MLRLVALVISISVLFPWLSSERRGRMRIFFLHWASGVMYVMSQFIMSVMVLNCWSSRDDSGPFIYFLKFWELTVLNLWSISSLAIAILIASIVQSFVTLRRVPTMIGSTRAACVCVVLAVLATVLSAVFWNGVLITGGYFWVTNTSNESHGRWISLSFGATQTVAGILMA 170          
BLAST of mRNA_C-tenellus_contig9268.1.1 vs. uniprot
Match: D7FUL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL8_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.490e-22
Identity = 50/116 (43.10%), Postives = 77/116 (66.38%), Query Frame = 0
Query:   52 LHWVSGFGYASSQLIMSIMVINCWSTN-ELKPFIYTLKFLELWSVNVFSLSNLALTINLAHIVEGYKKCQRVS---GEDSQYLAKVVVVVGFLMAMASVPFWDELLVTGGYFWVAS 163
            LHW S   Y  SQL+MS+MVINCWS+     P IY LKF+EL S+N++++S++A+++ +A IV+ + K +RV    G      + V V +G  + + S PFW+++LVTG YFW+ +
Sbjct:    6 LHWASAVTYVVSQLVMSVMVINCWSSKTRAGPVIYVLKFVELTSINLWAISSMAISLLIASIVQAFSKMRRVPRVIGSSRVIWSCVFVAMG--LTLLSAPFWNDVLVTGSYFWITN 119          
BLAST of mRNA_C-tenellus_contig9268.1.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 9.220e-12
Identity = 35/94 (37.23%), Postives = 54/94 (57.45%), Query Frame = 0
Query:   70 MVINCWSTNELKPFIYTLKFLELWSVNVFSLSNLALTINLAHIVEGYKKCQRVSGEDSQYLAKVVVVVGFLMAMASVPFWDELLVTGGYFWVAS 163
            M+  CW    L+ FI  LK+LE  S N+ +++NLA+ INLA +V  ++   RV    +  L  + + +  + A ASVPFW   +V+G  FWV +
Sbjct:    1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTN 94          
BLAST of mRNA_C-tenellus_contig9268.1.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 4.360e-11
Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = 0
Query:   70 MVINCWSTNELKPFIYTLKFLELWSVNVFSLSNLALTINLAHIVEGYKKCQRVSGEDSQYLAKVVVVVGFLMAMASVPFWDELLVTGGYFWVAS 163
            M+  CW    L+ FI  LK+LE  S N+ +++NLA+ INLA +V  ++   RV+   +  L  + + +  + A ASVPFW   +V+G  FWV +
Sbjct:    8 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTN 101          
BLAST of mRNA_C-tenellus_contig9268.1.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 3.780e-7
Identity = 35/98 (35.71%), Postives = 56/98 (57.14%), Query Frame = 0
Query:   70 MVINCWSTNELKPFIYTLKFLELWSVNVFSLSNLALTINLAHIVEGYKKCQR-VSGEDSQYLAKVVVVVGFLMAMASVPFWDELLVTGGYFWVASTGQ 166
            M+  CW+   L   I T KFLEL SVN+ +++NLA+ +NLA +V  +   Q  V+   S  L  V +V+    A A+ PFW+ ++++G  F+  +  Q
Sbjct:    5 MISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQ 102          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9268.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FUL6_ECTSI2.140e-3144.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRD9_9PHAE6.480e-2941.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUL8_ECTSI1.490e-2243.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNN2_ECTSI9.220e-1237.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8K6_9PHAE4.360e-1137.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNM5_ECTSI3.780e-735.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 114..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 150..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9268contigC-tenellus_contig9268:814..3473 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9268.1.1mRNA_C-tenellus_contig9268.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9268 675..3695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9268.1.1 ID=prot_C-tenellus_contig9268.1.1|Name=mRNA_C-tenellus_contig9268.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=200bp
MSTCNSDLFEVGMQRGEEAANILRLIAVMVVASALSAWFNSLKIKRMILM
FLHWVSGFGYASSQLIMSIMVINCWSTNELKPFIYTLKFLELWSVNVFSL
SNLALTINLAHIVEGYKKCQRVSGEDSQYLAKVVVVVGFLMAMASVPFWD
ELLVTGGYFWVASTGQDTTIFPFGAAQASPEIIVSPQEDWPYSLDISRA*
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