prot_C-tenellus_contig9243.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig9243.2.1
Unique Name	prot_C-tenellus_contig9243.2.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	158

Homology

[Close]

BLAST of mRNA_C-tenellus_contig9243.2.1 vs. uniprot
Match: D7FR67_ECTSI (Ubiquitin family protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR67_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 2.120e-29
Identity = 85/183 (46.45%), Postives = 101/183 (55.19%), Query Frame = 0

Query:    1 MREQLPTLMRQMADPQNMQAIMNMQSAMQQLQRSGLIPAA------GTGGMXXXXXXXXAGLGDFANLNLGGA-PPAAPTGGLDFSALLGGGGSGTPGTVPGQSTSGVAPVPQ-------------------PAAVNPEETYASQITQMSDMGFTDRQACIRALVRTRGNVNAAVEQMLGGGV 157
            +R QLP  MR+MADPQN+QA+  MQ  M+QLQR+G++P        G GG         AGL +F   NLGG  PPAA  GGLDFS LLG                                          P   NPEETYA+Q+TQM+DMGFTDR AC+RALV ++GNVN AVE+MLGGGV
Sbjct:  384 LRGQLPQFMRRMADPQNVQALAQMQQWMEQLQRAGVLPPGMMPGPPGAGGGGADFGPGLAGLSNFGTFNLGGGTPPAA--GGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGGGV 564

[Close]

BLAST of mRNA_C-tenellus_contig9243.2.1 vs. uniprot
Match: A0A835Z7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M7_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 3.280e-21
Identity = 71/167 (42.51%), Postives = 91/167 (54.49%), Query Frame = 0

Query:    1 MREQLPTLMRQMADPQNMQAIMNMQSAMQQLQRSGLIPAAGTGGMXXXXXXXXAGLGDFANLNLGGAPPAAPT--------GGLDFSALLGGGGSGTP----GTVPGQSTSGVAPVPQPAAVNPEETYASQITQMSDMGFTDRQACIRALVRTRGNVNAAVEQMLGG 155
            MR+QLP L+  M+DP N+QA++ MQ +M QLQR+G++P                       +      PAA T        GGLDFSALL G G G P      VP    +   P P PA  NP E YA+Q+ Q+  MGF+D  A +RALV  RGNVNAAVE+++GG
Sbjct:  372 MRQQLPQLLSGMSDPANLQAMIQMQQSMAQLQRAGIMPP-------------------IPGMXXXXXAPAAATPXXXXXAAGGLDFSALLAGHGVGMPPGSGAAVPPAWLAAAQPPPPPA--NPAEAYAAQLAQLRAMGFSDDAASLRALVDARGNVNAAVERLIGG 517

[Close]

BLAST of mRNA_C-tenellus_contig9243.2.1 vs. uniprot
Match: A0A5D6XM90_9STRA (UBA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM90_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.880e-20
Identity = 69/168 (41.07%), Postives = 88/168 (52.38%), Query Frame = 0

Query:    4 QLPTLMRQMADPQNMQAIMNMQSAMQQLQRSGLIPAAGTGGMXXXXXXXXAGLGDFANLNLGGAPPAAPT--------------GGLDFSALLGGGGSGTPGTVPGQSTSGVAPVPQPAAVNPEETYASQITQMSDMGFTDRQACIRALVRTRGNVNAAVEQMLGGGV 157
            Q P  +R   +PQN+QA+M MQSAM QLQ SGLIP                     A +NLGGA  +APT              GG+DF+                 S  G A  P P   NPEE YASQ+TQ++DMGF++R+  +RAL  T+GNV+AAVE++L G V
Sbjct:  378 QSPEFLRAAMNPQNLQAMMQMQSAMNQLQSSGLIPG-------------------MAGMNLGGAAGSAPTSGTAAPAANPFAAFGGMDFA-----------------SFGGAAAAPAPVG-NPEELYASQLTQLTDMGFSNREQNLRALQATQGNVHAAVERLLSGTV 508

[Close]

BLAST of mRNA_C-tenellus_contig9243.2.1 vs. uniprot
Match: A0A2D4BV74_PYTIN (Ubiquitin family protein putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV74_PYTIN)

HSP 1 Score: 89.7 bits (221), Expect = 5.590e-18
Identity = 68/161 (42.24%), Postives = 85/161 (52.80%), Query Frame = 0

Query:    6 PTLMRQMADPQNMQAIMNMQSAMQQLQRSGLIPAAGTGGMXXXXXXXXAGLGDFANLNLGGA-----PPAAPTGG----LDFSALLGGGGSGTPGTVPGQSTSGVAPVPQPAAVNPEETYASQITQMSDMGFTDRQACIRALVRTRGNVNAAVEQMLGGGV 157
            P  +R + +PQN+QA++ MQSAM QL+ SGLIP                    F  +NLGGA     P   P  G    LDFS LLGG                 AP     A NPEE YASQ+TQ++DMGF++R   IRAL  T GNV+AAVE++L G +
Sbjct:  352 PDFIRGIMNPQNLQAMLQMQSAMNQLRSSGLIPG-------------------FXAMNLGGAGMPGAPGTTPAAGSGPPLDFSTLLGG-------XXXXXXXXAAAP-----AANPEEQYASQLTQLNDMGFSNRDQNIRALQATFGNVHAAVERILNGSI 481

[Close]

BLAST of mRNA_C-tenellus_contig9243.2.1 vs. uniprot
Match: A0A0W8DBV9_PHYNI (DNA polymerase kappa n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DBV9_PHYNI)

HSP 1 Score: 85.1 bits (209), Expect = 5.250e-17
Identity = 65/144 (45.14%), Postives = 80/144 (55.56%), Query Frame = 0

Query:   14 DPQNMQAIMNMQSAMQQLQRSGLIPAAGTGGMXXXXXXXXAGLGDFANLNLGGAPPAAPTGGLDFSALLGGGGSGTPGTVPGQSTSGVAPVPQPAAVNPEETYASQITQMSDMGFTDRQACIRALVRTRGNVNAAVEQMLGGGV 157
            +PQNMQA+M MQ+AM QL+ SGLIP  G  GM         G G  A     GA         +  A+ GG        +PG S  G A  P   A NPEE YASQ+TQ++DMGF+DR   IRAL  T GNV AAV+++L G +
Sbjct:  149 EPQNMQAMMQMQNAMNQLRGSGLIP--GLEGMNL-------GAGTGAXXXTTGATGVTNPAAANPFAMFGG--------LPG-SGFGAASTPAAPAGNPEEIYASQLTQLNDMGFSDRDRNIRALQATFGNVQAAVDRLLSGSI 274

[Close]

BLAST of mRNA_C-tenellus_contig9243.2.1 vs. uniprot
Match: I0Z0B5_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z0B5_COCSC)

HSP 1 Score: 86.3 bits (212), Expect = 9.880e-17
Identity = 72/152 (47.37%), Postives = 89/152 (58.55%), Query Frame = 0

Query:    6 PTLMRQMADPQNMQAIMNMQSAMQQLQRSGLIPAAGTGGMXXXXXXXXAGLGDFANLNLG-GAPPAAPTGGLDFSAL-LGGGGSGTPGTVPGQSTSGVAPVPQPAAV-NPEETYASQITQMSDMGFTDRQACIRALVRTRGNVNAAVEQMLG 154
            P ++R+  DP N+QA+M MQ AMQQLQ SGL+P    G +    XXXX          +  GAPPA P     F++L +GGGG G  G        GV     PAAV NPE  YA+Q+ Q+  MGF D QA I+AL  T GNVNAAVE++LG
Sbjct:  370 PDMLRRSLDPANIQAMMQMQQAMQQLQGSGLMPPGPGGALGLGAXXXXXXXXXLEQPPVSAGAPPAVPNFASMFNSLNMGGGGXGLGGF-------GV-----PAAVSNPETAYATQLEQLRAMGFFDEQANIQALQATGGNVNAAVERLLG 509

[Close]

BLAST of mRNA_C-tenellus_contig9243.2.1 vs. uniprot
Match: W2Q789_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2Q789_PHYPN)

HSP 1 Score: 85.5 bits (210), Expect = 1.900e-16
Identity = 65/144 (45.14%), Postives = 80/144 (55.56%), Query Frame = 0

Query:   14 DPQNMQAIMNMQSAMQQLQRSGLIPAAGTGGMXXXXXXXXAGLGDFANLNLGGAPPAAPTGGLDFSALLGGGGSGTPGTVPGQSTSGVAPVPQPAAVNPEETYASQITQMSDMGFTDRQACIRALVRTRGNVNAAVEQMLGGGV 157
            +PQNMQA+M MQ+AM QL+ SGLIP  G  GM         G G  A     GA         +  A+ GG        +PG S  G A  P   A NPEE YASQ+TQ++DMGF+DR   IRAL  T GNV AAV+++L G +
Sbjct:  416 NPQNMQAMMQMQNAMNQLRGSGLIP--GLEGMNL-------GAGTGAGTGTTGATGVTNPAAANPFAMFGG--------LPG-SGFGAASTPAAPAGNPEEIYASQLTQLNDMGFSDRDRNIRALQATFGNVQAAVDRLLSGSI 541

[Close]

BLAST of mRNA_C-tenellus_contig9243.2.1 vs. uniprot
Match: A0A8J9WM63_9CHLO (Ubiquilin-1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WM63_9CHLO)

HSP 1 Score: 82.4 bits (202), Expect = 2.250e-15
Identity = 67/157 (42.68%), Postives = 84/157 (53.50%), Query Frame = 0

Query:    6 PTLMRQMADPQNMQAIMNMQSAMQQLQRSGLIP-AAGTGGMXXXXXXXXAGLGDFANLNLGGAPPAA--PTGGLDFSAL-----LGGGGSGTPGTVPGQSTSGVAPVPQPAAVNPEETYASQITQMSDMGFTDRQACIRALVRTRGNVNAAVEQMLG 154
            P  +R+  DP N+QA+M MQ AMQQLQ SGL+P +AG+            GLG          P +A    G  DFS++     +GGGG G           G   VP  A  NPE  YA+Q+ Q+  MGF D QA I+AL  T GNVNAAVE++LG
Sbjct:  392 PETLRRSLDPANIQAMMQMQQAMQQLQASGLMPPSAGS----------PLGLGAXXXXXXXQPPTSAGAAAGAPDFSSMFNALNMGGGGMGL----------GGFGVPAAAVANPETLYATQLEQLRAMGFYDEQANIQALQATGGNVNAAVERLLG 528

[Close]

BLAST of mRNA_C-tenellus_contig9243.2.1 vs. uniprot
Match: A0A5B8MJE3_9CHLO (Hypothetical protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJE3_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 1.030e-14
Identity = 61/150 (40.67%), Postives = 78/150 (52.00%), Query Frame = 0

Query:    6 PTLMRQMADPQNMQAIMNMQSAMQQLQRSGLIPAAGTGGMXXXXXXXXAGLGDFANLNLGGAPPAAPTGGLDFSALLGGGGSGTPGTVPGQSTSGVAPVPQPAAVNPEETYASQITQMSDMGFTDRQACIRALVRTRGNVNAAVEQMLGG 155
            P  +RQMADP N++A+M MQ AMQQLQ SGL+PA                                      F + + G G G PG   G + +   P P    V PEE YASQ+TQ+ +MGF D+QA IRAL +  GNVNAAV+++L G
Sbjct:  389 PNFLRQMADPANIRAMMQMQQAMQQLQSSGLMPA--------------------------------------FPSSMEGFG-GFPGA--GAAAANTNPTPN---VPPEELYASQLTQLQEMGFHDQQANIRALSQVGGNVNAAVDRLLSG 494

[Close]

BLAST of mRNA_C-tenellus_contig9243.2.1 vs. uniprot
Match: M4B561_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B561_HYAAE)

HSP 1 Score: 74.3 bits (181), Expect = 1.480e-12
Identity = 56/143 (39.16%), Postives = 79/143 (55.24%), Query Frame = 0

Query:   14 DPQNMQAIMNMQSAMQQLQRSGLIPAAGTGGMXXXXXXXXAGLGDFANLNLGGAPPAAPTGGLDFSALLGGGGSGTPGTVPGQSTSGVAPVPQPAAVNPEETYASQITQMSDMGFTDRQACIRALVRTRGNVNAAVEQMLGGG 156
            +PQN+QA+  MQ+AM QL+ SG++                +GL +  N    G   A  T  ++  A+  G G+     +P  S + V         NPEE YASQ+TQ+SDMGF++R+  IRAL  T GNV AAV+++LGGG
Sbjct:  408 NPQNLQAMTQMQNAMNQLRGSGIL----------------SGL-EGTNFGPPGGAGAGATTAVNPFAMFSGSGA-----IPNISAASVG--------NPEEVYASQLTQLSDMGFSNREQNIRALQATLGNVQAAVDRLLGGG 520

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig9243.2.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig9243.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FR67_ECTSI	2.120e-29	46.45	Ubiquitin family protein, expressed n=1 Tax=Ectoca...	[more]
A0A835Z7M7_9STRA	3.280e-21	42.51	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A5D6XM90_9STRA	2.880e-20	41.07	UBA domain-containing protein n=1 Tax=Pythium bras...	[more]
A0A2D4BV74_PYTIN	5.590e-18	42.24	Ubiquitin family protein putative (Fragment) n=1 T...	[more]
A0A0W8DBV9_PHYNI	5.250e-17	45.14	DNA polymerase kappa n=1 Tax=Phytophthora nicotian...	[more]
I0Z0B5_COCSC	9.880e-17	47.37	Uncharacterized protein n=1 Tax=Coccomyxa subellip...	[more]
W2Q789_PHYPN	1.900e-16	45.14	Uncharacterized protein n=8 Tax=Phytophthora TaxID...	[more]
A0A8J9WM63_9CHLO	2.250e-15	42.68	Ubiquilin-1 n=1 Tax=Coccomyxa sp. Obi TaxID=231545...	[more]
A0A5B8MJE3_9CHLO	1.030e-14	40.67	Hypothetical protein n=1 Tax=Chloropicon primus Ta...	[more]
M4B561_HYAAE	1.480e-12	39.16	Uncharacterized protein n=1 Tax=Hyaloperonospora a...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 116..154 e-value: 3.2E-9 score: 46.6
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 116..150 e-value: 1.6E-9 score: 37.4
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 111..155 score: 12.354
None	No IPR available	GENE3D	1.10.8.10		coord: 110..157 e-value: 1.9E-19 score: 71.3
None	No IPR available	PANTHER	PTHR10677:SF3	FI07626P-RELATED	coord: 4..155
None	No IPR available	PANTHER	PTHR10677	UBIQUILIN	coord: 4..155
None	No IPR available	CDD	cd14399	UBA_PLICs	coord: 115..154 e-value: 6.28595E-15 score: 62.9337
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 112..155

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig9243	contig	C-tenellus_contig9243:4237..4946 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig9243.2.1	mRNA_C-tenellus_contig9243.2.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig9243 2920..5982 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig9243.2.1 ID=prot_C-tenellus_contig9243.2.1|Name=mRNA_C-tenellus_contig9243.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=158bp
MREQLPTLMRQMADPQNMQAIMNMQSAMQQLQRSGLIPAAGTGGMGGVGA
PGMAGLGDFANLNLGGAPPAAPTGGLDFSALLGGGGSGTPGTVPGQSTSG
VAPVPQPAAVNPEETYASQITQMSDMGFTDRQACIRALVRTRGNVNAAVE
QMLGGGV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015940	UBA
IPR009060	UBA-like_sf