prot_C-tenellus_contig924.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig924.3.1
Unique Nameprot_C-tenellus_contig924.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length506
Homology
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BLAST of mRNA_C-tenellus_contig924.3.1 vs. uniprot
Match: D8LM12_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM12_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 5.510e-115
Identity = 237/585 (40.51%), Postives = 301/585 (51.45%), Query Frame = 0 
Query:    2 ELARKGRRHVKLSKLFLGALSHRWLNIFVGIAWSQIFWLLLEGVLGNADTHAPIRLSSVFAYAVSLQSASNLLLYFYRESE------ALGFLCELSTDVVGFAWVNVADELLSQMFGVTALTAATYVVLVTIIGLTAMVAGAASREWLSWPLSFEGTANEFAAGSFAIPTSWLITQTVHIGLYGFFYRSSYRSPPFTQGGEDGDDV-IHLSSSLLLLPYAFLCTLVATRFFTGTV----------------------------DGSSNMLLHREVKTPLSAIALAEGDDEDMIKGPRSGDSKAEGRPSNGVG-DILVEHWGTECEQTIASSSS-------------LSPQDVYDRTFQLDHSTRGNCITRFGGISRAMLLYGQLTVGMMVGWAYNMWGQVEFRQEELEFRYGPVIGAFIYAMLCTVLGTCVMIRGADGLDRTAPTQYDAS------------PNPG----------------------VRFYR-RRMLVAVGGVSLMVGWAWEETFDLFLDAFFGEDVGLGIILSKLGLAVTATACALGRNGRSQGNVEATGVNPSPHLSSGREGD-LLTPLLNT 501
            E+  KGRRH+K+SKL+L  L  R  NIFV +AWSQ FWL+LE   GN D+   +RLSSV  YA++L +  +LLL+ Y          AL FL +L TDVVGFAW+NVA+E+L+Q+F V A T   Y  L     L AM  G+ +R  L WP+ FE TAN+F AGSFA+PTSWL+TQ VHIGLYGFFYR++         GE+ D V + L++SL LL YA LC+ +ATR   GTV                             GS + L+ R + +     A    D          GD +A   PS G G +      G +      S+S+             L+                G    R   + R +  Y +LTVGMMVGWAYN+WGQVEFRQEELEFR+GP +GA  YA L T LG CVM+RGAD L  +   +  A               PG                      VR Y  RR+LV VGGVSL+VGWAWEE FDL L+   G++     +++KL LAV AT   LGR  R  G  +A G +   H  +G  G  LL PL+ T
Sbjct:    3 EVYAKGRRHLKISKLYLKGLLKRGPNIFVALAWSQAFWLILEATAGNEDSRGYVRLSSVACYALALHAGGHLLLHRYSSGRRKLSHHALEFLLDLVTDVVGFAWINVAEEMLAQVFEVRAKTTLVYAALAFAASLGAMELGSLARSLLDWPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGFFYRTAGGQGGRGGDGEEDDVVDVRLAASLFLLAYALLCSALATRVIGGTVAAXXXXXXXXXXXXXXXXXLTRSNSGGSTGSRSDLVIRAISS-YGVTAAQASDAAXXXXXXXXGDVEASSTPSCGGGRNTSYREGGGDVADVGPSNSTKVGDGGGERGAAPLAXXXXXXXXXXXXXXAAGGEDARRDSLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGSNRRKNGAGGAVNDSVGGALGSRPGGGYFHVERPEEDGEETRRRDAAVRSYHARRLLVVVGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAKLSLAVAATVVVLGREVRRAGRRDAGGGDLHDHNGAGEGGGGLLEPLVPT 586
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig924.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM12_ECTSI5.510e-11540.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 226..329
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 330..349
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..225
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 430..444
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 409..429
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 369..388
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 445..465
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 350..368
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 466..505
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..181
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 389..408

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig924contigC-tenellus_contig924:5214..7585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig924.3.1mRNA_C-tenellus_contig924.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig924 4520..7610 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig924.3.1 ID=prot_C-tenellus_contig924.3.1|Name=mRNA_C-tenellus_contig924.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=506bp
MELARKGRRHVKLSKLFLGALSHRWLNIFVGIAWSQIFWLLLEGVLGNAD
THAPIRLSSVFAYAVSLQSASNLLLYFYRESEALGFLCELSTDVVGFAWV
NVADELLSQMFGVTALTAATYVVLVTIIGLTAMVAGAASREWLSWPLSFE
GTANEFAAGSFAIPTSWLITQTVHIGLYGFFYRSSYRSPPFTQGGEDGDD
VIHLSSSLLLLPYAFLCTLVATRFFTGTVDGSSNMLLHREVKTPLSAIAL
AEGDDEDMIKGPRSGDSKAEGRPSNGVGDILVEHWGTECEQTIASSSSLS
PQDVYDRTFQLDHSTRGNCITRFGGISRAMLLYGQLTVGMMVGWAYNMWG
QVEFRQEELEFRYGPVIGAFIYAMLCTVLGTCVMIRGADGLDRTAPTQYD
ASPNPGVRFYRRRMLVAVGGVSLMVGWAWEETFDLFLDAFFGEDVGLGII
LSKLGLAVTATACALGRNGRSQGNVEATGVNPSPHLSSGREGDLLTPLLN
TECGE*
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