prot_C-tenellus_contig9210.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9210.1.2
Unique Nameprot_C-tenellus_contig9210.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length196
Homology
[Close]
BLAST of mRNA_C-tenellus_contig9210.1.2 vs. uniprot
Match: A0A6H5KG81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG81_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 4.150e-63
Identity = 107/196 (54.59%), Postives = 128/196 (65.31%), Query Frame = 0 
Query:    1 MSITKEVLDQHLAELNSNSCRDKATLLLREGKAAEAAKWFSKAISRSPADSSLFSARSMAWETAGRGTLAVSDAAVGVCMRPRVAAGFIRLSSALESQGRYKEAVRACFLGMRCGDSRCNGILGSSMARVRELGSLPPVEWTPVSQRERWVWRLLSVRGLILRFLER-AGRWT--GLSIAARIAAGGDNFMHPPWP 193
            M  +KEV++  LA  + N CRDKA  LL+EGKA  + +WFSKAI   PAD+SL+  RS +WE AG    AV DA VGVC+RPRVAAGF RLS+  E+QGR+ + VRACFLGMRCGDS  NG LG  M+  RE G LPP++WTP  +RERW W  LS RG +LR     AGR    G  +A     GG     PPWP
Sbjct:    1 MVFSKEVVELQLATKDPNLCRDKAVKLLKEGKAELSVEWFSKAIRLRPADASLYWGRSQSWERAGNPRKAVVDAGVGVCLRPRVAAGFARLSATFEAQGRHADVVRACFLGMRCGDSSKNGELGRRMSSAREAGQLPPLDWTPPDRRERWTWAFLSFRGFLLRLAAGIAGRLRVGGAGLALGACEGGQGLSSPPWP 196
[Close]
BLAST of mRNA_C-tenellus_contig9210.1.2 vs. uniprot
Match: D7G7K5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K5_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 1.200e-43
Identity = 76/133 (57.14%), Postives = 88/133 (66.17%), Query Frame = 0 
Query:   64 AGRGTLAVSDAAVGVCMRPRVAAGFIRLSSALESQGRYKEAVRACFLGMRCGDSRCNGILGSSMARVRELGSLPPVEWTPVSQRERWVWRLLSVRGLILRFLER-AGRWT--GLSIAARIAAGGDNFMHPPWP 193
            AG    AV DA VGVC+RPRVAAGF RLS++ E+QGR+ + VRACFLGMRCGDS  NG LG  M+  RE G LPP++WTP  +RERW W  LS RG +LR     AGR    G  +A    AGG  F  PPWP
Sbjct:    2 AGNPRKAVVDAGVGVCLRPRVAAGFARLSASFEAQGRHADVVRACFLGMRCGDSSKNGELGRRMSSAREAGQLPPLDWTPPDRRERWTWAFLSFRGFLLRLAAGIAGRLRVGGAGLALAACAGGQGFSSPPWP 134
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9210.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG81_9PHAE4.150e-6354.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7K5_ECTSI1.200e-4357.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 16..118
e-value: 3.0E-13
score: 51.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 21..115
NoneNo IPR availablePANTHERPTHR22904TPR REPEAT CONTAINING PROTEINcoord: 16..113
NoneNo IPR availablePANTHERPTHR22904:SF394STRESS-INDUCED-PHOSPHOPROTEIN 1coord: 16..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9210contigC-tenellus_contig9210:579..2810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9210.1.2mRNA_C-tenellus_contig9210.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig9210 374..4963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9210.1.2 ID=prot_C-tenellus_contig9210.1.2|Name=mRNA_C-tenellus_contig9210.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=196bp
MSITKEVLDQHLAELNSNSCRDKATLLLREGKAAEAAKWFSKAISRSPAD
SSLFSARSMAWETAGRGTLAVSDAAVGVCMRPRVAAGFIRLSSALESQGR
YKEAVRACFLGMRCGDSRCNGILGSSMARVRELGSLPPVEWTPVSQRERW
VWRLLSVRGLILRFLERAGRWTGLSIAARIAAGGDNFMHPPWPGA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf