prot_C-tenellus_contig9197.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9197.1.2
Unique Nameprot_C-tenellus_contig9197.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length545
Homology
BLAST of mRNA_C-tenellus_contig9197.1.2 vs. uniprot
Match: D7G7E4_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E4_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 8.190e-68
Identity = 126/263 (47.91%), Postives = 165/263 (62.74%), Query Frame = 0
Query:  257 CSGGSAEYWNAKDGVWVSEFVTDDGSSFPLDMFHVQEVNGTAELWIDEIETWMAPSLYDQLQFNYVRLDMTCPSSPQPT-SCVIFKPVFSNWSPRLVGDEVGFRFEYPELPSVKELPQAQPFSPGD-LLVIEDRIVNKTGGEPPTVCNGDQAEYLGEDGYWRTNNFGSTAKTHALDHVFYTSSLGNVSQLWISTIQATWSPNLEATLMNRTVRLKISCVDRGDDIRTDYVAFQVGADPLTCEDIPLLCVE-NMETSNALSVMP 516
            C+G SA++W+ K+G W S F T DG S  LDMF++  V+G  ELW+ EIE+WMAPSLY+QLQ+NYV+L +TCP       SCVIF+P F+NWSP + G   G+RF  P LPS  ++P+A P SPGD LL   + +V +TG    T CNGD AEY GEDGYW      S  +TH L HVFY +       L+ +TIQA W PNL   L NR VRL++ C +   D R +Y+  +V  +  TC+DI  LC E + +   AL + P
Sbjct:  364 CTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVDSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSF-DIPEAVPNSPGDVLLTTSNSVVTRTGATTETYCNGDSAEYSGEDGYWYNEFVKSNGETHELKHVFYPTQ----RDLYAATIQANWEPNLRGLLENRIVRLQVYCTN---DERAEYLYIRVSGESATCDDIEDLCTEVDGDGDGALQLAP 618          
BLAST of mRNA_C-tenellus_contig9197.1.2 vs. uniprot
Match: D8LRK2_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK2_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 2.600e-67
Identity = 127/263 (48.29%), Postives = 165/263 (62.74%), Query Frame = 0
Query:  257 CSGGSAEYWNAKDGVWVSEFVTDDGSSFPLDMFHVQEVNGTAELWIDEIETWMAPSLYDQLQFNYVRLDMTCPSSPQPT-SCVIFKPVFSNWSPRLVGDEVGFRFEYPELPSVKELPQAQPFSPGD-LLVIEDRIVNKTGGEPPTVCNGDQAEYLGEDGYWRTNNFGSTAKTHALDHVFYTSSLGNVSQLWISTIQATWSPNLEATLMNRTVRLKISCVDRGDDIRTDYVAFQVGADPLTCEDIPLLCVE-NMETSNALSVMP 516
            C+G SA++W+ K+G W S F T DG S  LDMF++  V+G  ELW+ EIE+WMAPSLY+QLQ+NYV+L +TCP       SCVIF+P F+NWSP + G   G+RF  P LPS  ++P+A P SPGD LL   + +V KTG    T CNGD AEY GEDGYW      S  +TH L HVFY +       L+ +TIQA W PNL   L NR VRL++ C +   D R +Y+  +V  +  TC+DI  LC E + +   AL + P
Sbjct:  425 CTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVDSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSF-DIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSAEYSGEDGYWYNAFVKSDGETHELKHVFYPTQ----RDLYAATIQANWEPNLRGLLENRIVRLQVYCTN---DERAEYLYIRVSGESATCDDIEDLCTEVDGDGDGALQLAP 679          
BLAST of mRNA_C-tenellus_contig9197.1.2 vs. uniprot
Match: D7G672_ECTSI (WSC domain-containing protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G672_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.160e-66
Identity = 127/265 (47.92%), Postives = 162/265 (61.13%), Query Frame = 0
Query:  257 CSGGSAEYWNAKDGVWVSEFVTDDGSSFPLDMFHVQEVNGTAELWIDEIETWMAPSLYDQLQFNYVRLDMTCPSSPQPT-SCVIFKPVFSNWSPRLVGDEVGFRFEYPELPSVKELPQAQPFSPGD-LLVIEDRIVNKTGGEPPTVCNGDQAEYLGEDGYWRTNNFGSTAKTHALDHVFYTSSLGNVSQLWISTIQATWSPNLEATLMNRTVRLKISCVDRGDDIRTDYVAFQVGADPLTCEDIPLLCVENMETSNALSVMPRVG 519
            C+G SA++W+ K+G W S F T DG S  LDMF++  V+G  ELW+ EIE+WMAPSLY+QLQ+NYV+L +TCP       SCVIF+P F+NWSP + G   G+RF  P LPS  ++P+A P SPGD LL   + +V KTG    T CNGD AEY GEDGYW      S   TH L HVFY +       L+ +TIQA W PNL   L NR VRL++ C +   D R +Y+  +V  +  TC+DI  LC          +V PR G
Sbjct:  424 CTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVDSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSF-DIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSAEYSGEDGYWYNAFVKSDGDTHELKHVFYPTQ----RDLYAATIQANWEPNLRGLLENRIVRLRVYCTN---DERAEYLYIRVSGESATCDDIEDLCT---------AVFPRAG 671          
BLAST of mRNA_C-tenellus_contig9197.1.2 vs. uniprot
Match: D7FS83_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS83_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 2.620e-43
Identity = 81/152 (53.29%), Postives = 104/152 (68.42%), Query Frame = 0
Query:  257 CSGGSAEYWNAKDGVWVSEFVTDDGSSFPLDMFHVQEVNGTAELWIDEIETWMAPSLYDQLQFNYVRLDMTCPSSPQPT-SCVIFKPVFSNWSPRLVGDEVGFRFEYPELPSVKELPQAQPFSPGD-LLVIEDRIVNKTGGEPPTVCNGDQA 406
            C+G SA++W+ K+G W S F T DG S  LDMF++  V+G  ELW+ EIE+WMAPSLY+QLQ+NYV+L +TCP       SCVIF+P F+NWSP + G   G+RF  P LPS  ++P+A P SPGD LL   + +V KTG    T CNGD A
Sbjct:   95 CTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVDSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSF-DIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSA 245          
BLAST of mRNA_C-tenellus_contig9197.1.2 vs. uniprot
Match: D7FPM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM5_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 7.220e-35
Identity = 99/261 (37.93%), Postives = 137/261 (52.49%), Query Frame = 0
Query:  257 CSGGSAEYWNAKDGVWVSEF----VTDDGSSFPLDMFH-VQEVNGTAELWIDEIETWMAPSLYDQLQFNYVRLDMTCPSSPQ----PTSCVIFKPVFSNWSPRLVGDEVGFRFEYPELPSVKELPQAQPFSPGDLLVIEDR-IVNKTGGEPPTVCNGDQAEYLGEDGYWRTNNFGSTAKTHALDHVFYTSSLGNVSQLWISTIQATWSPNLEATLMNRTVRLKISCVDRGDDIRTDYVAFQVGADPL--TCEDIPLLCVEN 505
            C+G S  Y  A +G W +E       +   + P+  F       G  E+ +  I T +AP++ D L    + L +TC    Q      SCV+F+  F+N+SP    +   FRFE P +P + E+P AQP SPGD+ + E   +V   G E    CNGD AEYLGEDG W     GS  + + L HVFYT+      QL I+TIQ+ WSPNLEA L NR VRL I C ++ +     Y+ F++G      +C+D   LCV +
Sbjct:   83 CTGDSWRY-QAANGEWKTELSFPATWESSDAAPMVSFEGFFNATGDGEITVSGIPTSIAPAVSDSLYGRNIELALTCNQEDQIVMEEDSCVLFQVDFTNYSPTFDVNMALFRFEDPAVPGI-EMPLAQPLSPGDIQLNEGNPVVELDGSEVSWGCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDF---DQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNH-EDGYLIFKIGGQEFDESCDDHSGLCVHD 337          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9197.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G7E4_ECTSI8.190e-6847.91WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LRK2_ECTSI2.600e-6748.29WSC domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G672_ECTSI1.160e-6647.92WSC domain-containing protein n=3 Tax=Ectocarpus s... [more]
D7FS83_ECTSI2.620e-4353.29WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FPM5_ECTSI7.220e-3537.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..517
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 542..544
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 518..541
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9197contigC-tenellus_contig9197:810..4569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9197.1.2mRNA_C-tenellus_contig9197.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig9197 692..5254 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9197.1.2 ID=prot_C-tenellus_contig9197.1.2|Name=mRNA_C-tenellus_contig9197.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=545bp
MGGWGWHGIVWTITTVATLLNGAVGEDFRYQSLESCDYTFAKGELPQFNL
PNTEWGTTLLNDGNPIVNAADLTAIGNDCSGESASFSNGDGTWNSTFVGR
YGTLYEFDFFSSTVDELFIGTVEPKHDPESFYATLNNTVIRLNIKCGDDS
DVVGSCVEFTGNLAGYVQYPFESTCYHGFQSGVMAPTFRAPMASPFGPGE
AYPMSSGNPIIKGGAIDEGLGWWAGFDGQDGNRLHNSYWSDWWSEAMSSL
SEVDSSCSGGSAEYWNAKDGVWVSEFVTDDGSSFPLDMFHVQEVNGTAEL
WIDEIETWMAPSLYDQLQFNYVRLDMTCPSSPQPTSCVIFKPVFSNWSPR
LVGDEVGFRFEYPELPSVKELPQAQPFSPGDLLVIEDRIVNKTGGEPPTV
CNGDQAEYLGEDGYWRTNNFGSTAKTHALDHVFYTSSLGNVSQLWISTIQ
ATWSPNLEATLMNRTVRLKISCVDRGDDIRTDYVAFQVGADPLTCEDIPL
LCVENMETSNALSVMPRVGSWGGGRLVVGILTVSLAWLAAIRVL*
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