prot_C-tenellus_contig9162.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9162.1.1
Unique Nameprot_C-tenellus_contig9162.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length114
Homology
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BLAST of mRNA_C-tenellus_contig9162.1.1 vs. uniprot
Match: A0A6H5L4R6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R6_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 9.600e-18
Identity = 49/115 (42.61%), Postives = 64/115 (55.65%), Query Frame = 0 
Query:    1 MCLGRAK--CHSGESSVGVFKCSHCGTKHINFFPTSVSGL--FIVSQDNNKNCLVRGKGPLKNSVGMQRCEKGGTPLRILESALHKAGVHLLAADGQCFDGERFRTCDDRDKALR 111
            MCLG +     S    VGV KC     K++     SV G   F+++Q   KNCL RG+G L+NS  MQ     GT L ++E+ +H AG+ +   D  CFDG RFRTC+D D  LR
Sbjct:   80 MCLGSSSGGMFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQ--GKNCLARGQGRLRNSADMQL--SSGTALEVVETPIHVAGMQIATVDDYCFDGARFRTCNDGDPTLR 190
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BLAST of mRNA_C-tenellus_contig9162.1.1 vs. uniprot
Match: A0A7S0SYE8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SYE8_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 5.750e-13
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 0 
Query:   41 VSQDNNKNCLVRGKGPLKNSVGMQRCEKGG-TPLRILESALHKAGVHLLAADGQCFDGERFRTCD 104
            +   N+  CLVRGK   KNS+ +Q C+KG   PL    +A+H+AG +L AADG+CFDG +FR+CD
Sbjct:  126 IKLSNHGKCLVRGKKTYKNSISLQSCQKGEYLPLVYHPTAVHEAGFYLKAADGKCFDGNKFRSCD 190
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9162.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4R6_9PHAE9.600e-1842.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0SYE8_9STRA5.750e-1350.77Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9162contigC-tenellus_contig9162:1018..1698 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9162.1.1mRNA_C-tenellus_contig9162.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9162 1018..1698 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9162.1.1 ID=prot_C-tenellus_contig9162.1.1|Name=mRNA_C-tenellus_contig9162.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=114bp
MCLGRAKCHSGESSVGVFKCSHCGTKHINFFPTSVSGLFIVSQDNNKNCL
VRGKGPLKNSVGMQRCEKGGTPLRILESALHKAGVHLLAADGQCFDGERF
RTCDDRDKALRQVV
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