prot_C-tenellus_contig9161.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9161.1.1
Unique Nameprot_C-tenellus_contig9161.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length225
Homology
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BLAST of mRNA_C-tenellus_contig9161.1.1 vs. uniprot
Match: A0A6H5JZ11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ11_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 9.140e-5
Identity = 51/199 (25.63%), Postives = 96/199 (48.24%), Query Frame = 0 
Query:    5 FTDAGDAVLALSADRDSELSRVVLKAGRTLIALVSELSRLQAFTDDLASVCDHVTKTGLWSKILTADQAQKMMGWCLRLANIPETN-----VPRTVL-DDMASRQEGSDGSPARQVAQKAAASKGLEIKESDTHGVGLCAVKDIKAGDFIDISCFGTFVVYDTEKEVHDAIVADGVPRYMV--TNDMASMCVGGEVSRP 195
            F  AGD+VL  + D ++ ++ +VL  GRTL ALV+++S+       + + C    + G ++++    +A  ++      + +PE N     VPR +   ++A     ++ +     A+  A    +EI+ S  HG+GL AV D+   + + I   G F  + T +     ++ D VPR+ +   +D + +      SRP
Sbjct:    6 FAVAGDSVLVTAFD-ENPIAPLVLGNGRTLCALVADMSKKDDVDKAVDAACTDAMRHGWFAELC---KANVIISGSTLPSIVPENNLSNEAVPRHLEGQELAGPDVETEETSCLYSARVFADEFHVEIEPSSIHGLGLFAVHDLPKDEAMPIPLMGDFE-FHTPEGAFGMMLDDKVPRHPLLDASDFSVVIWTQRKSRP 199
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9161.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZ11_9PHAE9.140e-525.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 121..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9161contigC-tenellus_contig9161:4822..5845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9161.1.1mRNA_C-tenellus_contig9161.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9161 4822..5845 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9161.1.1 ID=prot_C-tenellus_contig9161.1.1|Name=mRNA_C-tenellus_contig9161.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=225bp
FRTRFTDAGDAVLALSADRDSELSRVVLKAGRTLIALVSELSRLQAFTDD
LASVCDHVTKTGLWSKILTADQAQKMMGWCLRLANIPETNVPRTVLDDMA
SRQEGSDGSPARQVAQKAAASKGLEIKESDTHGVGLCAVKDIKAGDFIDI
SCFGTFVVYDTEKEVHDAIVADGVPRYMVTNDMASMCVGGEVSRPHAVLF
FCATTLPLFVVHELMRGGLGEGEC*
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