prot_C-tenellus_contig8969.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig8969.1.1
Unique Name	prot_C-tenellus_contig8969.1.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	162

Homology

[Close]

BLAST of mRNA_C-tenellus_contig8969.1.1 vs. uniprot
Match: A0A2I6RJN1_SACJA (GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A2I6RJN1_SACJA)

HSP 1 Score: 281 bits (719), Expect = 7.780e-93
Identity = 134/153 (87.58%), Postives = 144/153 (94.12%), Query Frame = 0

Query:    3 KRRVMVTGGSGLVGKGIEEFIATDPEAQENEEYIFLCSKDGDLRSMEETKAIFEKHKPTHVIHLAARVGGLFSNLKYKVEFYRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEAYAYAKRMIDVLNRCYK 155
            K+ VMVTGG+GLVG GI+EF+ +D EA+E EEYIFL SKDGD+R+MEETK IFEK+KPTHVIHLAARVGGLFSNLKYKVEF+RENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPH SNE YAYAKRMIDVLNRCYK
Sbjct:   12 KKVVMVTGGTGLVGCGIKEFVESDAEAKEKEEYIFLSSKDGDIRNMEETKLIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYK 164

[Close]

BLAST of mRNA_C-tenellus_contig8969.1.1 vs. uniprot
Match: A0A836C923_9STRA (GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C923_9STRA)

HSP 1 Score: 266 bits (679), Expect = 6.420e-87
Identity = 123/149 (82.55%), Postives = 139/149 (93.29%), Query Frame = 0

Query:    7 MVTGGSGLVGKGIEEFIATDPEAQENEEYIFLCSKDGDLRSMEETKAIFEKHKPTHVIHLAARVGGLFSNLKYKVEFYRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEAYAYAKRMIDVLNRCYK 155
            MVTGG+GLVG+GIEE+++TDP AQ  EEYIFL SKDG+L +M E +AIFEKH PTHVIHLAA+VGGLF+NLKYKVEFYREN+LINDNVMECCRIYKV+KLVSCLSTC+FPDKTTYPIDETMVH GPPH+SNE YAYAKRMIDV+NRCY+
Sbjct:    1 MVTGGTGLVGQGIEEWVSTDPTAQAEEEYIFLSSKDGNLLNMAECRAIFEKHAPTHVIHLAAKVGGLFNNLKYKVEFYRENMLINDNVMECCRIYKVQKLVSCLSTCVFPDKTTYPIDETMVHAGPPHSSNEGYAYAKRMIDVMNRCYR 149

[Close]

BLAST of mRNA_C-tenellus_contig8969.1.1 vs. uniprot
Match: A0A6T7DWV8_9STRA (GDP-L-fucose synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DWV8_9STRA)

HSP 1 Score: 256 bits (655), Expect = 1.970e-82
Identity = 120/152 (78.95%), Postives = 138/152 (90.79%), Query Frame = 0

Query:    3 KRRVMVTGGSGLVGKGIEEFIATDPEAQENEEYIFLCSKDGDLRSMEETKAIFEKHKPTHVIHLAARVGGLFSNLKYKVEFYRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEAYAYAKRMIDVLNRCY 154
            +R V+VTGGSGLVG+GI+ FIATD EA  NEE++FL SKDGDL+S  +T+AIF ++KPTHVIHLAA+VGGLF+N K+KVEFYR+NI+INDNVMECCRI+ V KLVSCLSTCIFPDKTTYPIDETMVH+GPPH SNE YAYAKRMIDVLNRCY
Sbjct:   64 ERVVLVTGGSGLVGQGIKSFIATDAEAAANEEWVFLSSKDGDLKSRTDTEAIFRRYKPTHVIHLAAKVGGLFANQKFKVEFYRDNIIINDNVMECCRIFGVRKLVSCLSTCIFPDKTTYPIDETMVHDGPPHKSNEGYAYAKRMIDVLNRCY 215

[Close]

BLAST of mRNA_C-tenellus_contig8969.1.1 vs. uniprot
Match: A0A7S2WX89_9STRA (GDP-L-fucose synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX89_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.660e-80
Identity = 115/152 (75.66%), Postives = 137/152 (90.13%), Query Frame = 0

Query:    3 KRRVMVTGGSGLVGKGIEEFIATDPEAQENEEYIFLCSKDGDLRSMEETKAIFEKHKPTHVIHLAARVGGLFSNLKYKVEFYRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEAYAYAKRMIDVLNRCY 154
            +R V+VTGGSGLVGKGIE F+ +D EA +NE + FL SKDGDLRS E+T+ +F +++PTHVIHLAA+VGGLF+N+  KVEFYREN+LINDNVMECCRI+KV+KLVSCLSTCIFPDKT+YPIDE+MVHNGPPH SNE YAYAKR+IDV+NRCY
Sbjct:   73 ERIVLVTGGSGLVGKGIEAFLKSDQEAMKNESWKFLSSKDGDLRSREDTERVFRRYRPTHVIHLAAKVGGLFANMNEKVEFYRENVLINDNVMECCRIFKVQKLVSCLSTCIFPDKTSYPIDESMVHNGPPHVSNEGYAYAKRLIDVMNRCY 224

[Close]

BLAST of mRNA_C-tenellus_contig8969.1.1 vs. uniprot
Match: W7TZW1_9STRA (GDP-L-fucose synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZW1_9STRA)

HSP 1 Score: 251 bits (641), Expect = 6.890e-78
Identity = 115/153 (75.16%), Postives = 136/153 (88.89%), Query Frame = 0

Query:    3 KRRVMVTGGSGLVGKGIEEFIATDPEAQENEEYIFLCSKDGDLRSMEETKAIFEKHKPTHVIHLAARVGGLFSNLKYKVEFYRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEAYAYAKRMIDVLNRCYK 155
            K+ V++TGG+GLVGKGIE+FI++DP AQE+E Y+FL SKDGDLR   +T AIFEKH+P +V+HLAA VGGLF N+  KVEFYREN+LINDNVME C+ +KVEKLVSCLSTCIFPDKTTYPIDETM+HNGPPH SNE YAYAKRM+DV++RCYK
Sbjct:  281 KKVVLITGGTGLVGKGIEDFISSDPIAQESESYVFLSSKDGDLRDKAQTYAIFEKHRPAYVVHLAALVGGLFRNMAQKVEFYRENMLINDNVMEACKDFKVEKLVSCLSTCIFPDKTTYPIDETMIHNGPPHASNEGYAYAKRMLDVMSRCYK 433

[Close]

BLAST of mRNA_C-tenellus_contig8969.1.1 vs. uniprot
Match: UPI000644A6AA (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644A6AA)

HSP 1 Score: 241 bits (614), Expect = 5.020e-77
Identity = 112/152 (73.68%), Postives = 133/152 (87.50%), Query Frame = 0

Query:    6 VMVTGGSGLVGKGIEEFIATDPEAQENEEYIFLCSKDGDLRSMEETKAIFEKHKPTHVIHLAARVGGLFSNLKYKVEFYRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEAYAYAKRMIDVLNRCYKVR 157
            VMVTGG+GLVGKGIE +I    +A+++E++++L S DGDLRS+E+T+AIF K+KPTHVIHLAARVGGLFSN+KYKVEF+RENI INDN++ CC  +KV K VSCLSTCIFPDKTTYPIDETMVHNGPPH SNE YAYAKRMIDVL+R Y  +
Sbjct:    7 VMVTGGTGLVGKGIEAYIQQQGDARKDEQWVYLRSADGDLRSLEQTQAIFRKYKPTHVIHLAARVGGLFSNMKYKVEFFRENIAINDNILACCHEFKVVKCVSCLSTCIFPDKTTYPIDETMVHNGPPHFSNEGYAYAKRMIDVLSRAYNAQ 158

[Close]

BLAST of mRNA_C-tenellus_contig8969.1.1 vs. uniprot
Match: A0A7S2GAW9_9STRA (GDP-L-fucose synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GAW9_9STRA)

HSP 1 Score: 241 bits (616), Expect = 9.600e-77
Identity = 111/149 (74.50%), Postives = 132/149 (88.59%), Query Frame = 0

Query:    6 VMVTGGSGLVGKGIEEFIATDPEAQENEEYIFLCSKDGDLRSMEETKAIFEKHKPTHVIHLAARVGGLFSNLKYKVEFYRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEAYAYAKRMIDVLNRCY 154
            V+VTGG+GLVGKGI+ F+ +DP AQE+E +I+L SKDGDLR+    + IF  ++PTHVIHLAA+VGGLF+N+  KVEFYREN+LINDNVMECCR +KV+KLVSCLSTC+FPDKTTYPIDETMVH+GPPH SNE YAYAKRMIDV+NRCY
Sbjct:   48 VLVTGGTGLVGKGIQAFVDSDPVAQESECWIYLSSKDGDLRNASAVEKIFMAYRPTHVIHLAAKVGGLFANMSQKVEFYRENMLINDNVMECCRKFKVDKLVSCLSTCVFPDKTTYPIDETMVHSGPPHVSNEGYAYAKRMIDVMNRCY 196

[Close]

BLAST of mRNA_C-tenellus_contig8969.1.1 vs. uniprot
Match: A0A7S1UTT3_9STRA (GDP-L-fucose synthase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTT3_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.540e-75
Identity = 113/153 (73.86%), Postives = 133/153 (86.93%), Query Frame = 0

Query:    2 GKRRVMVTGGSGLVGKGIEEFIATDPEAQENEEYIFLCSKDGDLRSMEETKAIFEKHKPTHVIHLAARVGGLFSNLKYKVEFYRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEAYAYAKRMIDVLNRCY 154
            GK+ VMVTGGSGLVG+GI  F+     A+ENEE+++L SKDGDLR  + T+AIFEK+KPTHVIHLAA+VGGLF+N+  KVEF+RENILINDN+MEC RIYKVEKLVS LSTCIFPDKT+YPIDETM+H+GPPH SNE YAYAKR+ID +NR Y
Sbjct:    7 GKKVVMVTGGSGLVGQGIRAFVEQSG-AKENEEWVYLSSKDGDLRDRKSTEAIFEKYKPTHVIHLAAKVGGLFANMAQKVEFFRENILINDNIMECSRIYKVEKLVSMLSTCIFPDKTSYPIDETMLHDGPPHPSNEGYAYAKRLIDTMNRAY 158

[Close]

BLAST of mRNA_C-tenellus_contig8969.1.1 vs. uniprot
Match: A0A7S2P233_9STRA (GDP-L-fucose synthase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P233_9STRA)

HSP 1 Score: 236 bits (602), Expect = 6.370e-75
Identity = 110/149 (73.83%), Postives = 131/149 (87.92%), Query Frame = 0

Query:    6 VMVTGGSGLVGKGIEEFIATDPEAQENEEYIFLCSKDGDLRSMEETKAIFEKHKPTHVIHLAARVGGLFSNLKYKVEFYRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEAYAYAKRMIDVLNRCY 154
            V+VTGGSGLVGK IE ++   P+  E+E +IFL SKDGD+RS E+T+ +F+KHKPTHVIHLAA+VGGLF+N+K KVEFYREN L+NDN+MECCRIYKV+KLVS LSTCIFPDKTTYPIDETM+HNGPPH SNE YAYAKR+ID ++R Y
Sbjct:   30 VLVTGGSGLVGKAIESYVNDSPKI-ESETWIFLSSKDGDIRSREDTEVLFKKHKPTHVIHLAAKVGGLFANMKAKVEFYRENTLMNDNIMECCRIYKVKKLVSFLSTCIFPDKTTYPIDETMLHNGPPHPSNEGYAYAKRLIDTMSRAY 177

[Close]

BLAST of mRNA_C-tenellus_contig8969.1.1 vs. uniprot
Match: A0A813BQ17_9DINO (GDP-L-fucose synthase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BQ17_9DINO)

HSP 1 Score: 235 bits (599), Expect = 7.120e-75
Identity = 113/148 (76.35%), Postives = 127/148 (85.81%), Query Frame = 0

Query:    7 MVTGGSGLVGKGIEEFIATDPEAQENEEYIFLCSKDGDLRSMEETKAIFEKHKPTHVIHLAARVGGLFSNLKYKVEFYRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEAYAYAKRMIDVLNRCY 154
            MVTGG+GLVGK +E     +P  +E E++IFL SKDGDLR  + T+AIFEK+KPTHVIHLAA VGGLF NLKYKVEFYR N L+NDN+MEC R +KVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPH+SNE YAYAKRMID +NRCY
Sbjct:    1 MVTGGTGLVGKALETVAKEEP--REGEKWIFLSSKDGDLRDPKATEAIFEKYKPTHVIHLAAFVGGLFRNLKYKVEFYRYNTLMNDNIMECARKFKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNEGYAYAKRMIDTMNRCY 146

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig8969.1.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig8969.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2I6RJN1_SACJA	7.780e-93	87.58	GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2...	[more]
A0A836C923_9STRA	6.420e-87	82.55	GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxI...	[more]
A0A6T7DWV8_9STRA	1.970e-82	78.95	GDP-L-fucose synthase n=1 Tax=Florenciella parvula...	[more]
A0A7S2WX89_9STRA	1.660e-80	75.66	GDP-L-fucose synthase n=1 Tax=Rhizochromulina mari...	[more]
W7TZW1_9STRA	6.890e-78	75.16	GDP-L-fucose synthase n=2 Tax=Monodopsidaceae TaxI...	[more]
UPI000644A6AA	5.020e-77	73.68	hypothetical protein n=1 Tax=Acytostelium subglobo...	[more]
A0A7S2GAW9_9STRA	9.600e-77	74.50	GDP-L-fucose synthase n=1 Tax=Dictyocha speculum T...	[more]
A0A7S1UTT3_9STRA	2.540e-75	73.86	GDP-L-fucose synthase n=1 Tax=Grammatophora oceani...	[more]
A0A7S2P233_9STRA	6.370e-75	73.83	GDP-L-fucose synthase n=1 Tax=Leptocylindrus danic...	[more]
A0A813BQ17_9DINO	7.120e-75	76.35	GDP-L-fucose synthase n=1 Tax=Symbiodinium sp. KB8...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 6..154 e-value: 2.8E-27 score: 95.7
None	No IPR available	GENE3D	3.40.50.720		coord: 1..159 e-value: 2.7E-45 score: 156.4
None	No IPR available	PANTHER	PTHR43238:SF1	GDP-L-FUCOSE SYNTHASE	coord: 3..156
None	No IPR available	PANTHER	PTHR43238	GDP-L-FUCOSE SYNTHASE	coord: 3..156
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 2..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig8969	contig	C-tenellus_contig8969:550..1692 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig8969.1.1	mRNA_C-tenellus_contig8969.1.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig8969 550..1692 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig8969.1.1 ID=prot_C-tenellus_contig8969.1.1|Name=mRNA_C-tenellus_contig8969.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=162bp
MGKRRVMVTGGSGLVGKGIEEFIATDPEAQENEEYIFLCSKDGDLRSMEE
TKAIFEKHKPTHVIHLAARVGGLFSNLKYKVEFYRENILINDNVMECCRI
YKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEAYAYAKRMIDVL
NRCYKVRKWQL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001509	Epimerase_deHydtase
IPR036291	NAD(P)-bd_dom_sf