prot_C-tenellus_contig8927.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8927.1.1
Unique Nameprot_C-tenellus_contig8927.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length279
Homology
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BLAST of mRNA_C-tenellus_contig8927.1.1 vs. uniprot
Match: D8LSK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK9_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 3.300e-22
Identity = 79/201 (39.30%), Postives = 103/201 (51.24%), Query Frame = 0 
Query:    1 MSSDKNGLRWRSIEELGFGEDVERELVDSMRKKILGFERERLAYINAMKSLVESSHSAPSKHVVHSKDRGNE--------SPFSEDIDVTGVAVKEDGPEARAVGSSRLE---------------ELRKARRVYHIQAEQIRRLYEAKGDASIRLQGERLSNLEQDYDLGLLRLERLLDRERILELLRLTDPNRPKSVTAS 178
            M        W S+EELG G D ++ L +S+R K L FERER AYI+A K L+                            S   E  +  GV   ++ P   A G  RL+                +R+AR    + +E+IR L+  K DA +RLQ ERLSNLE   +LG+LRLERLLDRERILELLRLTDP+R ++  A+
Sbjct:    1 MEHGLGDFAWESVEELGVGLDAQKTLAESIRAKTLEFEREREAYIDAAKQLLTXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGEVEEGRGVRRLDNTPGGNADGRRRLQLRRPWSGRGTAPKASSVREAREEQRLASEEIRTLHNRKSDAKVRLQAERLSNLEHGLELGVLRLERLLDRERILELLRLTDPDRAETTRAA 201
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8927.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSK9_ECTSI3.300e-2239.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8927contigC-tenellus_contig8927:1237..3765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8927.1.1mRNA_C-tenellus_contig8927.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8927 1237..3936 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8927.1.1 ID=prot_C-tenellus_contig8927.1.1|Name=mRNA_C-tenellus_contig8927.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=279bp
MSSDKNGLRWRSIEELGFGEDVERELVDSMRKKILGFERERLAYINAMKS
LVESSHSAPSKHVVHSKDRGNESPFSEDIDVTGVAVKEDGPEARAVGSSR
LEELRKARRVYHIQAEQIRRLYEAKGDASIRLQGERLSNLEQDYDLGLLR
LERLLDRERILELLRLTDPNRPKSVTASRSHRGSARAHGKEKQARPVANR
APWGRGGSRVSAGARARSADRVRWARGEGTWASQWGSDPSCRRGFGSWAG
GREESQGQGFGQGKVWAEDDQDGEKAEED
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