prot_C-tenellus_contig8787.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8787.1.1
Unique Nameprot_C-tenellus_contig8787.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length50
Homology
BLAST of mRNA_C-tenellus_contig8787.1.1 vs. uniprot
Match: D8LQ98_ECTSI (Cilia- and flagella-associated protein 53 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ98_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.500e-14
Identity = 32/43 (74.42%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    3 RRQYVQQCYNRQWRDACDEARALDSKATVDWVTSKRWQQVAEK 45
            RR YVQ+CY+RQWRDACD+AR LDSKA  +WVT++RW+QVAEK
Sbjct:  126 RRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEK 168          
BLAST of mRNA_C-tenellus_contig8787.1.1 vs. uniprot
Match: A0A835YTH0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH0_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.630e-8
Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    3 RRQYVQQCYNRQWRDACDEARALDSKATVDWVTSKRWQQVAEK 45
            R+Q+VQ  Y++QWRD+CD +R LDSKA +DWV ++R QQ+ EK
Sbjct:  127 RKQFVQDMYDKQWRDSCDASRTLDSKAFLDWVNAQREQQLEEK 169          
BLAST of mRNA_C-tenellus_contig8787.1.1 vs. uniprot
Match: A0A7S3YAB2_HETAK (Cilia- and flagella-associated protein 53 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB2_HETAK)

HSP 1 Score: 55.1 bits (131), Expect = 1.740e-7
Identity = 26/47 (55.32%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    3 RRQYVQQCYNRQWRDACDEARALDSKATVDWVTSKRWQQVAEKERQK 49
            R+ +VQ  Y+R+WRDACD+ARALDS+A +D+V  +R  Q++EK R+K
Sbjct:  123 RQAFVQDAYDRRWRDACDDARALDSQALLDFVAQERLSQLSEKGRRK 169          
BLAST of mRNA_C-tenellus_contig8787.1.1 vs. uniprot
Match: B8BRA0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRA0_THAPS)

HSP 1 Score: 48.5 bits (114), Expect = 3.580e-5
Identity = 21/43 (48.84%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    3 RRQYVQQCYNRQWRDACDEARALDSKATVDWVTSKRWQQVAEK 45
            R+++V++CY R+WR+ACD+ RALDSKAT+D +   R   + +K
Sbjct:  118 RQKFVKECYERRWREACDDLRALDSKATLDRLMKDRKAMIQKK 160          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8787.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LQ98_ECTSI1.500e-1474.42Cilia- and flagella-associated protein 53 n=2 Tax=... [more]
A0A835YTH0_9STRA3.630e-858.14Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A7S3YAB2_HETAK1.740e-755.32Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
B8BRA0_THAPS3.580e-548.84Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8787contigC-tenellus_contig8787:6004..6153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8787.1.1mRNA_C-tenellus_contig8787.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8787 6004..6153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8787.1.1 ID=prot_C-tenellus_contig8787.1.1|Name=mRNA_C-tenellus_contig8787.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=50bp
THRRQYVQQCYNRQWRDACDEARALDSKATVDWVTSKRWQQVAEKERQKE
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