prot_C-tenellus_contig8784.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8784.1.1
Unique Nameprot_C-tenellus_contig8784.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length280
Homology
BLAST of mRNA_C-tenellus_contig8784.1.1 vs. uniprot
Match: D7FY88_ECTSI (SSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY88_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.590e-53
Identity = 100/212 (47.17%), Postives = 138/212 (65.09%), Query Frame = 0
Query:   61 HSKLEADSKDSFYRLGVWVATHTCITLSVSIFLVILCMFGFANFSVESEGEKLWTPAESRSKSEEKIILTSFDDDTDFAVLLFTTKIKDGNVLTKTAFDELWIMNNFLYDIETDVGNTFVDLCEKGSDGITCTQPFRGPTRFWSSNYTLYQGTVSNDADILLAVNADTFPDGDEVTLEALFGNAMVFNETTGDLISAEAISQSYTLQSGTDE 272
            H ++   +   FYRLG WVATH   TL +S+  VI C FGFANF VE++GE LW PA+S +  +  IIL  FD   +FA  L  +  + G+VLTK + D +W ++  +  ++ D GNT+ D+C K  DG+TC QPFRG TRFW  ++  Y+ +VSNDAD+L AVNA TFPDG  V  +ALFGN + +++  G++  A AI Q+Y L S +DE
Sbjct:   30 HGRINKVADTLFYRLGYWVATHPKRTLLISLVFVIACCFGFANFRVEADGEDLWVPADSLTNDQRDIILGDFDGGGEFASFLVESPSETGSVLTKESVDAVWELDAIVMAVKVD-GNTYADVCLKELDGVTCEQPFRGITRFWG-DFATYEASVSNDADVLAAVNATTFPDGSAVNQQALFGNGITYDDD-GNISGATAIIQAYALDSDSDE 238          
BLAST of mRNA_C-tenellus_contig8784.1.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 2.390e-52
Identity = 101/226 (44.69%), Postives = 142/226 (62.83%), Query Frame = 0
Query:   58 ARAHSKLEADSKDSFYRLGVWVATHTCITLSVSIFLVILCMFGFANFSVESEGEKLWTPAESRSKSEEKIILTSFDDDTDFAVLLFTTKIKDGNVLTKTAFDELWIMNNFLYDIETDVGNTFVDLCEKGSDGITCTQPFRGPTRFWSSNYTLYQGTVSNDADILLAVNADTFPDGDEVTLEALFGNAMVFNETTGDLISAEAISQSYTLQSGTDEQ---EDEALEW 280
            AR H ++   + + FYRLG WVATH   TL +S+  VI C FGFANF +E++GE LW PA+S +K ++ II+  FDDD ++A   F  +   G+VLTK + D +W ++  +  +E   GNT+VD+C K  DG+TC  PFRG TRFW  ++  Y+ +V++DADIL AVN  TFPDG  V   ALFGN + + +  G++  A A  Q+Y L S  DE     D+  +W
Sbjct:   28 ARLHGRINEVADNFFYRLGYWVATHPKRTLLISLVFVIACCFGFANFRIEADGEDLWVPADSLAKDQQDIIIQDFDDDGEYAA--FLVESPSGSVLTKESVDAIWELDAIVMAVEAG-GNTYVDVCPKELDGVTCEPPFRGITRFWG-DFDTYEASVTSDADILAAVNVATFPDGSTVNQLALFGNGITY-DADGNISGASATMQAYALGSDPDEDTDLNDDVFDW 248          
BLAST of mRNA_C-tenellus_contig8784.1.1 vs. uniprot
Match: D8LCK9_ECTSI (Similar to Patched domain-containing protein 3, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK9_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 8.370e-48
Identity = 86/224 (38.39%), Postives = 134/224 (59.82%), Query Frame = 0
Query:   59 RAHSKLEADSKDSFYRLGVWVATHTCITLSVSIFLVILCMFGFANFSVESEGEKLWTPAESRSKSEEKIILTSFDDDTDFAVLLFTTKIKDGNVLTKTAFDELWIMNNFLYDIETDVGNTFVDLCEKGSDGITCTQPFRGPTRFWSSNYTLYQGTVSNDADILLAVNADTFPDGDEVTLEALFGNAMVFNETTGDLISAEAISQSYTLQSGTDEQED--EALEW 280
            R H+     + + FYRLG WVATH  +TL +++  V LC  GF NF++ ++G                          D+A+LL  + ++ GNVLTK + D LW +N+ +  +ET+ GNT+ DLC   +DG+TC QPFRG TRFW +++ +Y+   ++DAD+L A+N DT+PDG  V+LEA+FGN++ ++ T   ++SA    QSY L+   ++ E+  E  +W
Sbjct:   33 RTHAAANQAADERFYRLGYWVATHPTLTLLLNLVFVALCSIGFVNFTIVTDGS-------------------------DYALLLLESAVEGGNVLTKASVDMLWDLNSRVMLVETESGNTYTDLCTTDADGVTCKQPFRGITRFWGNDFDIYEAAATSDADVLAAINMDTYPDGQAVSLEAVFGNSLTYDATGSSVVSAGVFMQSYELELTANDDEEFWEVRQW 231          
BLAST of mRNA_C-tenellus_contig8784.1.1 vs. uniprot
Match: D7FY95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY95_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 3.410e-46
Identity = 89/215 (41.40%), Postives = 135/215 (62.79%), Query Frame = 0
Query:   58 ARAHSKLEADSKDSFYRLGVWVATHTCITLSVSIFLVILCMFGFANFSVESEGEKLWTPAESRSKSEEKIILTSFDDDTDFAVLLFTTKIKDGNVLTKTAFDELWIMNNFLYDIETDVGNTFVDLCEKGSDGITCTQPFRGPTRFWSSNYTLYQGTVSNDADILLAVNADTFPDGDEVTLEALFGNAMVFNETTGDLISAEAISQSYTLQSGTDE 272
            +R H ++   + + FYRLG  VAT+   TL +S+  V+ C FGFANF++E++GE LW PA+S ++  + I+L  FD D +FA  L  +  + G+VLTK + D +W ++  +  +E   GNT+ D+C K  DG+TC   FRG TRFW  ++  Y+ +V++DADIL  VN  TFPDG  V  +ALFGN + +++  G++  A A  Q + L S  D+
Sbjct:   25 SRFHGRINEVANNFFYRLGYRVATNPKRTLLISLAFVVACCFGFANFTIEADGEDLWVPADSLARDHQSIVLEDFDGDGEFASFLVESPSETGSVLTKESVDAIWELDAIVRAVEVG-GNTYADVCGKELDGVTCEPVFRGITRFWG-DFATYEASVTSDADILATVNVATFPDGSTVNQQALFGNGITYDDD-GNISGARATIQGFALDSDPDD 236          
BLAST of mRNA_C-tenellus_contig8784.1.1 vs. uniprot
Match: A0A835XJ22_9CHLO (SSD domain-containing protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XJ22_9CHLO)

HSP 1 Score: 80.1 bits (196), Expect = 3.610e-13
Identity = 62/222 (27.93%), Postives = 106/222 (47.75%), Query Frame = 0
Query:   75 LGVWVATHTCITLSVSIFLVILCMFGFANFSVESEGEKLWTPAESRSKSEEKIILTSFDDDTDFAVLLFTTK-----IKDGNVLTKTAFDELWIMNNFLYDIETDVGN---TFVDLCEKGSDGITCTQPFRGPTRFWSSNYTLYQGTVSNDA--------DILL-AVNADTFPDGDEVTLEALFGNAMVF---NETTGD----LISAEAISQSYTLQSGTDE 272
            +G + A    +   +S+ L   C  G+A F +ES+GE LW P +S++K +E  +  ++     +A  L T           N L  + F EL+ +++ +  +  + G    T+ D+CE   +G TC   + GP  +WS +Y  Y   V+  +        D+L+  VN   FPDG  V+  +LFG  ++    +   G     + SAE I+  Y+L+ G D+
Sbjct:   43 IGAFAARRPWLVTWLSVLLAGACAAGWARFRIESDGEVLWVPQDSKAKHDEDWVKANYVGGGGYAQFLATVNPAYSGAYGSNALQLSIFSELFSVDSAVRALVVNDGGRSYTWNDVCEVNFNG-TCK--YTGPLNYWSMDYGTYLAAVNGSSTDITAGNRDVLIDTVNEHEFPDGSSVSTLSLFGGIVLSPLADPPEGSPPLYMSSAEVIAVGYSLRDGLDD 261          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8784.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FY88_ECTSI1.590e-5347.17SSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FY89_ECTSI2.390e-5244.69Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
D8LCK9_ECTSI8.370e-4838.39Similar to Patched domain-containing protein 3, pa... [more]
D7FY95_ECTSI3.410e-4641.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835XJ22_9CHLO3.610e-1327.93SSD domain-containing protein n=2 Tax=Edaphochlamy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10796PATCHED-RELATEDcoord: 62..279
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..280
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8784contigC-tenellus_contig8784:946..4468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8784.1.1mRNA_C-tenellus_contig8784.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8784 946..4468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8784.1.1 ID=prot_C-tenellus_contig8784.1.1|Name=mRNA_C-tenellus_contig8784.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=280bp
LSALSPLLSHSTVETLLCRIQTQQQKAFVDRYITWNESPKMVDNSQEMSS
EKQLSRLARAHSKLEADSKDSFYRLGVWVATHTCITLSVSIFLVILCMFG
FANFSVESEGEKLWTPAESRSKSEEKIILTSFDDDTDFAVLLFTTKIKDG
NVLTKTAFDELWIMNNFLYDIETDVGNTFVDLCEKGSDGITCTQPFRGPT
RFWSSNYTLYQGTVSNDADILLAVNADTFPDGDEVTLEALFGNAMVFNET
TGDLISAEAISQSYTLQSGTDEQEDEALEW
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