prot_C-tenellus_contig842.11.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig842.11.1
Unique Nameprot_C-tenellus_contig842.11.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length282
Homology
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BLAST of mRNA_C-tenellus_contig842.11.1 vs. uniprot
Match: A0A6H5K0H9_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H9_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.350e-16
Identity = 86/186 (46.24%), Postives = 95/186 (51.08%), Query Frame = 0 
Query:    3 ASMNPYGIP-HLSMAGMAMGYSPYAHMAAAQHAAMXXXXXXXXXXXXXXXKDGGVDSRTEAVAPP-----------------------------------APAQGSSLPQMPQPYPHLGVYGGYPGMMGMPFPFQGQAYPGMPGYGMVGMGGYPSLACGGGGSMGEPM--SMMGGMNGMAAMQWAA 150
            A+ +PYG+P H+SMAGM MGYSPY HMAAA     XXXXXXXXXXXXXXX                                                  +P  G  L  M         YGGYPGMMGMP+PFQ   YPGMPGYG+ GMG YPSLA GGG    +P   S   GM+GMAAMQ AA
Sbjct:  313 AAQSPYGMPPHMSMAGMGMGYSPYVHMAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPMHGYGLHAM---------YGGYPGMMGMPYPFQAHGYPGMPGYGVPGMGSYPSLAAGGG----DPTLASSSFGMSGMAAMQLAA 485
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig842.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0H9_9PHAE1.350e-1646.24RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 152..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig842contigC-tenellus_contig842:10430..11275 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig842.11.1mRNA_C-tenellus_contig842.11.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig842 10332..13001 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig842.11.1 ID=prot_C-tenellus_contig842.11.1|Name=mRNA_C-tenellus_contig842.11.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=282bp
MAASMNPYGIPHLSMAGMAMGYSPYAHMAAAQHAAMAAAAVTASTAGGGG
GKDGGVDSRTEAVAPPAPAQGSSLPQMPQPYPHLGVYGGYPGMMGMPFPF
QGQAYPGMPGYGMVGMGGYPSLACGGGGSMGEPMSMMGGMNGMAAMQWAA
HAMQYQQQLQQQQQLHQQQMEQSHGCGAGSSDSEEGEDDLDGEAGHGGNN
GAGDRGDQRSGGRKVGSDGHGKAGVGGMPEDGEETQSDGDAEEEPRWEPP
AIVGRVNTAQLTRGEGGSAGSSHVLRGEHVP*
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