prot_C-tenellus_contig8410.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8410.4.1
Unique Nameprot_C-tenellus_contig8410.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length59
Homology
BLAST of mRNA_C-tenellus_contig8410.4.1 vs. uniprot
Match: D8LU38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU38_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.530e-18
Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    2 FRPGISNDLWSLFPMIYNAWDSFAYDLLTNMVVPIDNFISRGTDQFLAGVSPEG 55
            +  GIS  LWS+FPM+Y  WD +A+DL++NM VPIDN+ISRGTD F+AG S EG
Sbjct:   17 YGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEG 70          
BLAST of mRNA_C-tenellus_contig8410.4.1 vs. uniprot
Match: A0A6H5JN40_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN40_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 4.430e-17
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    2 FRPGISNDLWSLFPMIYNAWDSFAYDLLTNMVVPIDNFISRGTDQFLAGVSPEGRRW 58
            +  GIS  LWS+FPM+Y  WD +A+DL++NM VPIDN+ISRGTD F+AG S EG R+
Sbjct:  677 YGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGDRY 733          
BLAST of mRNA_C-tenellus_contig8410.4.1 vs. uniprot
Match: A0A5J4YB94_9CHLO (Putative importin-7 protein (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YB94_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 3.630e-10
Identity = 27/53 (50.94%), Postives = 42/53 (79.25%), Query Frame = 0
Query:    2 FRPGISNDLWSLFPMIYNAWDSFAYDLLTNMVVPIDNFISRGTDQFLAGVSPE 54
            F P IS  +WSL+P++++A++ +A D L N++VP+DNFIS+GT+ FLA  SP+
Sbjct:  647 FSPEISPRMWSLWPLLHSAYNDWAMDYLDNILVPLDNFISKGTEVFLACKSPD 699          
BLAST of mRNA_C-tenellus_contig8410.4.1 vs. uniprot
Match: A0A3L6ERS1_MAIZE (Importin beta-like SAD2 n=4 Tax=Zea mays TaxID=4577 RepID=A0A3L6ERS1_MAIZE)

HSP 1 Score: 63.2 bits (152), Expect = 3.630e-10
Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    2 FRPGISNDLWSLFPMIYNAWDSFAYDLLTNMVVPIDNFISRGTDQFLAGVSPEGRR--WD 59
            F P IS D+WSL+P++  A + +A D   N++VP+DN+ISRGTD FLA   P+ ++  WD
Sbjct:  675 FSPTISLDMWSLWPLMMEALNDWAIDFFENILVPLDNYISRGTDIFLASKDPDYQQSLWD 734          
BLAST of mRNA_C-tenellus_contig8410.4.1 vs. uniprot
Match: A0A0E0JZS8_ORYPU (Importin N-terminal domain-containing protein n=1 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0JZS8_ORYPU)

HSP 1 Score: 62.4 bits (150), Expect = 6.780e-10
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    2 FRPGISNDLWSLFPMIYNAWDSFAYDLLTNMVVPIDNFISRGTDQFLAGVSPE 54
            F P IS D+WSL+P++  A + +A D   N++VP+DN++SRGTD FLA   P+
Sbjct:  648 FSPSISLDMWSLWPLMMEALNDWAIDFFENILVPLDNYVSRGTDHFLACKDPD 700          
BLAST of mRNA_C-tenellus_contig8410.4.1 vs. uniprot
Match: A0A1E5UQT5_9POAL (Importin beta-like SAD2 n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5UQT5_9POAL)

HSP 1 Score: 62.4 bits (150), Expect = 6.780e-10
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    2 FRPGISNDLWSLFPMIYNAWDSFAYDLLTNMVVPIDNFISRGTDQFLAGVSPE 54
            + P IS D+WSL+P+I  A + +A D   N++VP+DN++SRGTD FLA   P+
Sbjct:  679 YSPSISLDMWSLWPLIMEALNDWAIDFFENILVPLDNYVSRGTDHFLACKDPD 731          
BLAST of mRNA_C-tenellus_contig8410.4.1 vs. uniprot
Match: A0A0A9IEK0_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9IEK0_ARUDO)

HSP 1 Score: 61.2 bits (147), Expect = 1.720e-9
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    2 FRPGISNDLWSLFPMIYNAWDSFAYDLLTNMVVPIDNFISRGTDQFLAGVSPE 54
            F P +S D+WSL+P++  A + +A D   N++VP+DN+ISRGTD FLA   P+
Sbjct:  278 FSPTLSLDMWSLWPLMMEALNDWAIDFFENILVPLDNYISRGTDHFLACKDPD 330          
BLAST of mRNA_C-tenellus_contig8410.4.1 vs. uniprot
Match: A0A0E0G6J9_ORYNI (Importin N-terminal domain-containing protein n=3 Tax=Oryzeae TaxID=147380 RepID=A0A0E0G6J9_ORYNI)

HSP 1 Score: 61.2 bits (147), Expect = 1.730e-9
Identity = 25/53 (47.17%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    2 FRPGISNDLWSLFPMIYNAWDSFAYDLLTNMVVPIDNFISRGTDQFLAGVSPE 54
            F P IS D+WSL+P++  A + +A D   N++VP+DN++SRG+D FLA  +P+
Sbjct:  661 FSPSISLDMWSLWPLMMEALNDWAIDFFENILVPLDNYVSRGSDHFLACKNPD 713          
BLAST of mRNA_C-tenellus_contig8410.4.1 vs. uniprot
Match: A0A0E0NET8_ORYRU (Importin N-terminal domain-containing protein n=1 Tax=Oryza rufipogon TaxID=4529 RepID=A0A0E0NET8_ORYRU)

HSP 1 Score: 61.2 bits (147), Expect = 1.730e-9
Identity = 25/53 (47.17%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    2 FRPGISNDLWSLFPMIYNAWDSFAYDLLTNMVVPIDNFISRGTDQFLAGVSPE 54
            F P IS D+WSL+P++  A + +A D   N++VP+DN++SRG+D FLA  +P+
Sbjct:  661 FSPSISLDMWSLWPLMMEALNDWAIDFFENILVPLDNYVSRGSDHFLACKNPD 713          
BLAST of mRNA_C-tenellus_contig8410.4.1 vs. uniprot
Match: A0A0D9YS79_9ORYZ (Importin N-terminal domain-containing protein n=1 Tax=Oryza glumipatula TaxID=40148 RepID=A0A0D9YS79_9ORYZ)

HSP 1 Score: 61.2 bits (147), Expect = 1.730e-9
Identity = 25/53 (47.17%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    2 FRPGISNDLWSLFPMIYNAWDSFAYDLLTNMVVPIDNFISRGTDQFLAGVSPE 54
            F P IS D+WSL+P++  A + +A D   N++VP+DN++SRG+D FLA  +P+
Sbjct:  661 FSPSISLDMWSLWPLMMEALNDWAIDFFENILVPLDNYVSRGSDHFLACKNPD 713          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8410.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU38_ECTSI1.530e-1862.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JN40_9PHAE4.430e-1761.40Importin N-terminal domain-containing protein n=2 ... [more]
A0A5J4YB94_9CHLO3.630e-1050.94Putative importin-7 protein (Fragment) n=1 Tax=Tre... [more]
A0A3L6ERS1_MAIZE3.630e-1048.33Importin beta-like SAD2 n=4 Tax=Zea mays TaxID=457... [more]
A0A0E0JZS8_ORYPU6.780e-1049.06Importin N-terminal domain-containing protein n=1 ... [more]
A0A1E5UQT5_9POAL6.780e-1049.06Importin beta-like SAD2 n=1 Tax=Dichanthelium olig... [more]
A0A0A9IEK0_ARUDO1.720e-949.06Uncharacterized protein n=1 Tax=Arundo donax TaxID... [more]
A0A0E0G6J9_ORYNI1.730e-947.17Importin N-terminal domain-containing protein n=3 ... [more]
A0A0E0NET8_ORYRU1.730e-947.17Importin N-terminal domain-containing protein n=1 ... [more]
A0A0D9YS79_9ORYZ1.730e-947.17Importin N-terminal domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8410contigC-tenellus_contig8410:5983..6159 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8410.4.1mRNA_C-tenellus_contig8410.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8410 5983..6159 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8410.4.1 ID=prot_C-tenellus_contig8410.4.1|Name=mRNA_C-tenellus_contig8410.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=59bp
LFRPGISNDLWSLFPMIYNAWDSFAYDLLTNMVVPIDNFISRGTDQFLAG
VSPEGRRWD
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