prot_C-tenellus_contig8392.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8392.2.1
Unique Nameprot_C-tenellus_contig8392.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length409
Homology
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BLAST of mRNA_C-tenellus_contig8392.2.1 vs. uniprot
Match: D8LE86_ECTSI (Similar to Transmembrane protein 15 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE86_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.170e-12
Identity = 40/80 (50.00%), Postives = 59/80 (73.75%), Query Frame = 0 
Query:  138 GGEIIYIARGVKEGAVGLLRDPVRGGQEEGVRGFAKGLGTGVFGVVGRPVRGIFRAGGNTCIGLR----NSAYIVLGASR 213
            GGE+++IA GV + AVG++RDPVRG Q +G RG  +G+G+GVFGVV +PV+G+ +AG N   G+R     +  +V+G+SR
Sbjct:  104 GGEVLFIAEGVAQAAVGIIRDPVRGAQADGARGLVRGIGSGVFGVVLKPVKGVAKAGVNAYTGVRIGVSKAGRVVVGSSR 183
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BLAST of mRNA_C-tenellus_contig8392.2.1 vs. uniprot
Match: A0A6H5L8T3_9PHAE (Dolichol kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8T3_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 2.160e-11
Identity = 39/80 (48.75%), Postives = 58/80 (72.50%), Query Frame = 0 
Query:  138 GGEIIYIARGVKEGAVGLLRDPVRGGQEEGVRGFAKGLGTGVFGVVGRPVRGIFRAGGNTCIGLR----NSAYIVLGASR 213
            GGE+++IA GV + A+G++RDPVRG Q +G RG  +GLG+GV GVV +PV+G+ +AG N   G+R     +  +V+G+SR
Sbjct:  253 GGEVLFIAEGVAQAALGVIRDPVRGAQADGARGLVRGLGSGVAGVVLKPVKGVAKAGVNAYTGVRIGVSKAGRVVVGSSR 332
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8392.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE86_ECTSI1.170e-1250.00Similar to Transmembrane protein 15 n=1 Tax=Ectoca... [more]
A0A6H5L8T3_9PHAE2.160e-1148.75Dolichol kinase n=1 Tax=Ectocarpus sp. CCAP 1310/3... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 308..408
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 287..307
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..286
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8392contigC-tenellus_contig8392:1316..3434 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8392.2.1mRNA_C-tenellus_contig8392.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8392 1072..3467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8392.2.1 ID=prot_C-tenellus_contig8392.2.1|Name=mRNA_C-tenellus_contig8392.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=409bp
MAGEQTEDTPESLFPLLGESAVLLLSVTVLAWTLHLNTDRDDVAIGLVAC
TFLACALAVLNQRRRERSWAIVARSRNRLTSVDDVLVTSAKDLEEDFPGK
LTNIIDEDDSSKEITQEGVHQGQGKGVALPKRRQYLLGGEIIYIARGVKE
GAVGLLRDPVRGGQEEGVRGFAKGLGTGVFGVVGRPVRGIFRAGGNTCIG
LRNSAYIVLGASRVSSRGKGTRSTNIAPRSMEVGDEASSEGLDEGGGGKE
LPPNLEQTPVPGVSLLQAETLGTPMTMNPSHKGIPNLRGLAVGVVTVPLL
LCSLVIASSSLSEGAHAGGIHLMNHNGCRGNGLRNFSGLSEGKMGNEQVL
QSNDLTKYLWTVLEGSILCSMSEVGKSIRFNWFSSEEHCSYVFTYHTSLN
MGLFHSSI*
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