prot_C-tenellus_contig8389.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8389.2.1
Unique Nameprot_C-tenellus_contig8389.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length91
Homology
BLAST of mRNA_C-tenellus_contig8389.2.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 1.570e-38
Identity = 65/90 (72.22%), Postives = 72/90 (80.00%), Query Frame = 0
Query:    1 MLLCSSNEDHSKVEPLAPPSGCAVGELVTFEGHLSSPVEAGNRAGKAWKRVASNLKVSEDKVANFAGEKLPAPFMTSAGPVTSSLPGGIS 90
            MLLCSSNEDHSKVEPL PP G  +GELVTF+GHL SPV+AGNRAGKAWKR +  L V + + A F GEKLPA FMTS GP+TS LPG IS
Sbjct:  169 MLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSEEAKFTGEKLPATFMTSKGPITSPLPGSIS 258          
BLAST of mRNA_C-tenellus_contig8389.2.1 vs. uniprot
Match: A0A835YNH3_9STRA (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH3_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.140e-32
Identity = 60/90 (66.67%), Postives = 68/90 (75.56%), Query Frame = 0
Query:    1 MLLCSSNEDHSKVEPLAPPSGCAVGELVTFEGHLSSPVEAGNRAGKAWKRVASNLKVSEDKVANFAGEKLPAPFMTSAGPVTSSLPGGIS 90
            M+LCSSN DH++V PL PP G  +GELVTFEGHL++PVEAGNRA KAWK+VA  + V ED VA F  E LPA F TS G VTS LPG IS
Sbjct:  155 MVLCSSNADHTQVAPLVPPEGTPLGELVTFEGHLAAPVEAGNRAVKAWKKVAKTVAVGEDGVARFTDEALPAAFATSKGVVTSPLPGNIS 244          
BLAST of mRNA_C-tenellus_contig8389.2.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.900e-26
Identity = 52/90 (57.78%), Postives = 65/90 (72.22%), Query Frame = 0
Query:    1 MLLCSSNEDHSKVEPLAPPSGCAVGELVTFEGHLSSPVEAGNRAGKAWKRVASNLKVSEDKVANFAGEKLPAPFMTSAGPVTSSLPGGIS 90
            MLLC+SNEDH+ V+PL+PP G A+GEL+TFEGH ++P   GNRAGKA+ RVA  L   ED +A + G     PFMTS GPVT+ + G IS
Sbjct:  275 MLLCASNEDHTVVKPLSPPPGVALGELITFEGHRAAPEPPGNRAGKAFDRVAEELGAGEDMIATYKG----IPFMTSKGPVTTGMAGSIS 360          
BLAST of mRNA_C-tenellus_contig8389.2.1 vs. uniprot
Match: A0A7S1P0A4_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1P0A4_9ALVE)

HSP 1 Score: 97.4 bits (241), Expect = 1.890e-24
Identity = 51/90 (56.67%), Postives = 61/90 (67.78%), Query Frame = 0
Query:    1 MLLCSSNEDHSKVEPLAPPSGCAVGELVTFEGHLSSPVEAGNRAGKAWKRVASNLKVSEDKVANFAGEKLPAPFMTSAGPVTSSLPGGIS 90
            MLLCSS+ D ++V PL+PP G A+GELVTF+G  S PV  GN+AGKA+ RVA +L V E  VA F       PF TSAG  TS +PG IS
Sbjct:   20 MLLCSSSPDGTRVAPLSPPEGAALGELVTFDGWASEPVAPGNKAGKAFDRVAEDLSVGEQGVATFRS----VPFQTSAGACTSEIPGKIS 105          
BLAST of mRNA_C-tenellus_contig8389.2.1 vs. uniprot
Match: A0A7S0XDL6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL6_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.990e-21
Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = 0
Query:    1 MLLCSSNEDHSKVEPLAPPSGCAVGELVTFEGHLSSPVEAGNRAGKAWKRVASNLKVSEDKVANFAGEKLPAPFMTSAGPVTSSLPGGIS 90
            M+LC++++D +KV+PL PP    +G+L+TFEGHLS PVE GNRA KA+ ++A    V+E  VA + G     PF T  GPVTS+L G IS
Sbjct:  130 MVLCTTSKDETKVDPLIPPPDAPIGQLITFEGHLSEPVEPGNRATKAFTKIADGFYVNEQGVATYNG----IPFSTPNGPVTSTLIGKIS 215          
BLAST of mRNA_C-tenellus_contig8389.2.1 vs. uniprot
Match: A0A7S3M138_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M138_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 5.950e-21
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    1 MLLCSSNEDHSKVEPLAPPSGCAVGELVTFEGHLSSPVEAGNRAGKAWKRVASNLKVSEDKVANFAGEKLPAPFMTSAGPVTSSL 85
            MLLCSSN+   KVEPL PP+G   GELV+FEGH+  P E GNRA KA+ +V+ +  VS+  +A + G     PFMTS GP+TS++
Sbjct:  149 MLLCSSNKADGKVEPLIPPAGVPAGELVSFEGHVIKPEEPGNRATKAYTKVSGDFVVSDSGIATYKG----IPFMTSKGPITSTI 229          
BLAST of mRNA_C-tenellus_contig8389.2.1 vs. uniprot
Match: A0A7S2R5F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5F0_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 9.050e-21
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    1 MLLCSSNEDHSKVEPLAPPSGCAVGELVTFEGHLSSPVEAGNRAGKAWKRVASNLKVSEDKVANFAGEKLPAPFMTSAGPVTSSLPGGI 89
            M+LC+S+ +H+ V+ + PP+G A GELVTF+GHL++PV+AGNRA KA+K+VA   K  +   A F GE   + F TS+GP TS +  G+
Sbjct:  150 MVLCASDAEHTDVQLVVPPAGVAAGELVTFDGHLAAPVDAGNRAVKAFKKVAGLFKTDDSGAAVFTGEPASS-FQTSSGPCTSPISNGV 237          
BLAST of mRNA_C-tenellus_contig8389.2.1 vs. uniprot
Match: A0A7S0FZY8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZY8_9RHOD)

HSP 1 Score: 92.0 bits (227), Expect = 1.550e-20
Identity = 47/92 (51.09%), Postives = 62/92 (67.39%), Query Frame = 0
Query:    1 MLLCSSNEDHSKVEPLAPPSGCAVGELVTFEGHLSSPVEAGNRAGKAWKRVASNLKVSEDKVANFAGEKLPAPFMTSAGPVTS--SLPGGIS 90
            MLLC+SN DHS+V+PL+PP  C  GEL+TF+GH S+P++ GNRA KA+ RVA +L  +ED +A +      A F T  GP  S   L GG+S
Sbjct:  203 MLLCASNADHSEVDPLSPPEECGNGELITFDGHKSAPIDPGNRATKAFDRVADDLSTNEDGIAQYQD----AAFKTPFGPCYSPRKLVGGVS 290          
BLAST of mRNA_C-tenellus_contig8389.2.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 90.1 bits (222), Expect = 3.100e-20
Identity = 46/92 (50.00%), Postives = 59/92 (64.13%), Query Frame = 0
Query:    1 MLLCSSNEDHSKVEPLAPPSGCAVGELVTFEGHLSSPVEAGNRAGKAWKRVASNLKVSEDKVANFAGEKLPAPFMTSAGPVTS--SLPGGIS 90
            MLLC+SNEDH+KV+PL  P   A+G L+TFEGH ++P++AGNRA KA+ +VAS      D +A F       PFMT AG   S   L G +S
Sbjct:  145 MLLCASNEDHTKVDPLTAPPDAAIGSLITFEGHRAAPMDAGNRASKAFDKVASEFNTDADGIARFNA----TPFMTEAGACYSPAKLQGSVS 232          
BLAST of mRNA_C-tenellus_contig8389.2.1 vs. uniprot
Match: A0A1X6NL47_PORUM (tRNA-binding domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL47_PORUM)

HSP 1 Score: 83.6 bits (205), Expect = 5.260e-19
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    1 MLLCSSNEDHSKVEPLAPPSGCAVGELVTFEGHLSSPVEAGNRAGKAWKRVASNLKVSEDKVANF---AGEKLPAPFMTSAGPVTS 83
            MLLC+S+     VEPLAPP G A+G+LVTFEGH S+PV  GNRA KA+ RV + L+ +++ VA +    G   P PF  + G V S
Sbjct:    9 MLLCASDGGKGAVEPLAPPDGAALGDLVTFEGHASAPVAPGNRASKAFDRVVAGLRTTDEGVAVYEAPGGGAPPVPFAVAGGVVVS 94          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8389.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMW6_ECTSI1.570e-3872.22Endothelial monocyte-activating polypeptide II pro... [more]
A0A835YNH3_9STRA1.140e-3266.67Endothelial monocyte-activating polypeptide II pro... [more]
W7U6C4_9STRA8.900e-2657.78Endothelial monocyte-activating polypeptide ii pro... [more]
A0A7S1P0A4_9ALVE1.890e-2456.67Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
A0A7S0XDL6_9STRA1.990e-2151.11Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S3M138_9STRA5.950e-2152.94Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7S2R5F0_9STRA9.050e-2149.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0FZY8_9RHOD1.550e-2051.09Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZE83_9RHOD3.100e-2050.00Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A1X6NL47_PORUM5.260e-1950.00tRNA-binding domain-containing protein n=1 Tax=Por... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 1..87
e-value: 3.1E-13
score: 51.8
NoneNo IPR availablePANTHERPTHR11586TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBERcoord: 1..88
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8389contigC-tenellus_contig8389:1074..1849 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8389.2.1mRNA_C-tenellus_contig8389.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8389 1059..1849 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8389.2.1 ID=prot_C-tenellus_contig8389.2.1|Name=mRNA_C-tenellus_contig8389.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=91bp
MLLCSSNEDHSKVEPLAPPSGCAVGELVTFEGHLSSPVEAGNRAGKAWKR
VASNLKVSEDKVANFAGEKLPAPFMTSAGPVTSSLPGGIS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold